RNA–Protein interactions for RNA: ENST00000390363.2

TRBV9-201, Transcript of T cell receptor beta variable 9, humanhuman

APPRIS P1 BASIC

Gene TRBV9, Length 390 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9-201ENST00000390363 INCENPQ9NQS7 918 aa8.74□□□□□ -1.01
TRBV9-201ENST00000390363 SAGE1Q9NXZ1 904 aa8.74□□□□□ -1.01
TRBV9-201ENST00000390363 AGTPBP1Q9UPW5 1226 aa8.74□□□□□ -1.01
TRBV9-201ENST00000390363 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.74□□□□□ -1.01
TRBV9-201ENST00000390363 SLC45A1Q9Y2W3 748 aa8.74□□□□□ -1.01
TRBV9-201ENST00000390363 TMX2Q9Y320 296 aa8.74□□□□□ -1.01
TRBV9-201ENST00000390363 FOCADQ5VW36 1801 aa8.73□□□□□ -1.01
TRBV9-201ENST00000390363 TESPA1A2RU30 521 aaPredicted RBP8.73□□□□□ -1.01
TRBV9-201ENST00000390363 CCDC69A6NI79 296 aa8.73□□□□□ -1.01
TRBV9-201ENST00000390363 WDR46O15213 610 aaKnown RBP8.73□□□□□ -1.01
TRBV9-201ENST00000390363 TRPA1O75762 1119 aa8.73□□□□□ -1.01
TRBV9-201ENST00000390363 TOP1P11387 765 aaKnown RBP8.73□□□□□ -1.01
TRBV9-201ENST00000390363 HSPA4P34932 840 aa8.73□□□□□ -1.01
TRBV9-201ENST00000390363 GJA5P36382 358 aa8.73□□□□□ -1.01
TRBV9-201ENST00000390363 SLC1A4P43007 532 aa8.73□□□□□ -1.01
TRBV9-201ENST00000390363 EVX2Q03828 476 aa8.73□□□□□ -1.01
TRBV9-201ENST00000390363 RRP1BQ14684 758 aaKnown RBP8.73□□□□□ -1.01
TRBV9-201ENST00000390363 TMEM67Q5HYA8 995 aa8.73□□□□□ -1.01
TRBV9-201ENST00000390363 SH3D19Q5HYK7 790 aa8.73□□□□□ -1.01
TRBV9-201ENST00000390363 SLFN13Q68D06 897 aa8.73□□□□□ -1.01
TRBV9-201ENST00000390363 BLOC1S2Q6QNY1 142 aa8.73□□□□□ -1.01
TRBV9-201ENST00000390363 SAMD1Q6SPF0 538 aaPredicted RBP8.73□□□□□ -1.01
TRBV9-201ENST00000390363 CATIPQ7Z7H3 387 aa8.73□□□□□ -1.01
TRBV9-201ENST00000390363 CCDC84Q86UT8 332 aaPredicted RBP8.73□□□□□ -1.01
TRBV9-201ENST00000390363 CHURC1Q8WUH1 139 aa8.73□□□□□ -1.01
TRBV9-201ENST00000390363 BRI3BPQ8WY22 251 aa8.73□□□□□ -1.01
TRBV9-201ENST00000390363 MS4A4AQ96JQ5 239 aa8.73□□□□□ -1.01
TRBV9-201ENST00000390363 TMEM87BQ96K49 555 aa8.73□□□□□ -1.01
TRBV9-201ENST00000390363 JAKMIP1Q96N16 626 aaKnown RBP8.73□□□□□ -1.01
TRBV9-201ENST00000390363 MTA3Q9BTC8 594 aa8.73□□□□□ -1.01
TRBV9-201ENST00000390363 IL25Q9H293 177 aa8.73□□□□□ -1.01
TRBV9-201ENST00000390363 VCPKMTQ9H867 229 aa8.73□□□□□ -1.01
TRBV9-201ENST00000390363 RNF186Q9NXI6 227 aa8.73□□□□□ -1.01
TRBV9-201ENST00000390363 HOXC10Q9NYD6 342 aa8.73□□□□□ -1.01
TRBV9-201ENST00000390363 ZSWIM5Q9P217 1185 aa8.73□□□□□ -1.01
TRBV9-201ENST00000390363 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.73□□□□□ -1.01
TRBV9-201ENST00000390363 MTMR7Q9Y216 660 aa8.73□□□□□ -1.01
TRBV9-201ENST00000390363 BTBD19C9JJ37 291 aa8.72□□□□□ -1.01
TRBV9-201ENST00000390363 F5H6K3 240 aa8.72□□□□□ -1.01
TRBV9-201ENST00000390363 PRC1O43663 620 aa8.72□□□□□ -1.01
TRBV9-201ENST00000390363 GUCY1A2P33402 732 aa8.72□□□□□ -1.01
TRBV9-201ENST00000390363 GCLCP48506 637 aaPredicted RBP8.72□□□□□ -1.01
TRBV9-201ENST00000390363 KLRC3Q07444 240 aa8.72□□□□□ -1.01
TRBV9-201ENST00000390363 CCDC96Q2M329 555 aa8.72□□□□□ -1.01
TRBV9-201ENST00000390363 TSGA10IPQ3SY00 556 aa8.72□□□□□ -1.01
TRBV9-201ENST00000390363 DHX32Q7L7V1 743 aaKnown RBP8.72□□□□□ -1.01
TRBV9-201ENST00000390363 SPICE1Q8N0Z3 855 aa8.72□□□□□ -1.01
TRBV9-201ENST00000390363 GMCL1P1Q8NEA9 526 aa8.72□□□□□ -1.01
TRBV9-201ENST00000390363 ACER1Q8TDN7 264 aa8.72□□□□□ -1.01
TRBV9-201ENST00000390363 MKL1Q969V6 931 aa8.72□□□□□ -1.01
TRBV9-201ENST00000390363 ZKSCAN3Q9BRR0 538 aa8.72□□□□□ -1.01
TRBV9-201ENST00000390363 USP26Q9BXU7 913 aa8.72□□□□□ -1.01
TRBV9-201ENST00000390363 RPAP3Q9H6T3 665 aaPredicted RBP8.72□□□□□ -1.01
TRBV9-201ENST00000390363 NAP1L2Q9ULW6 460 aaPredicted RBP8.72□□□□□ -1.01
TRBV9-201ENST00000390363 CYP46A1Q9Y6A2 500 aa8.72□□□□□ -1.01
TRBV9-201ENST00000390363 TNKSO95271 1327 aa8.72□□□□□ -1.01
TRBV9-201ENST00000390363 NEDD4P46934 1319 aa8.72□□□□□ -1.01
TRBV9-201ENST00000390363 PLIN4Q96Q06 1357 aa8.72□□□□□ -1.01
TRBV9-201ENST00000390363 CCDC85CA6NKD9 419 aa8.71□□□□□ -1.02
TRBV9-201ENST00000390363 SMIM22K7EJ46 135 aa8.71□□□□□ -1.02
TRBV9-201ENST00000390363 ZBED4O75132 1171 aa8.71□□□□□ -1.02
TRBV9-201ENST00000390363 FLOT1O75955 427 aa8.71□□□□□ -1.02
TRBV9-201ENST00000390363 CALM1P0DP23 149 aa8.71□□□□□ -1.02
TRBV9-201ENST00000390363 CALM2P0DP24 149 aa8.71□□□□□ -1.02
TRBV9-201ENST00000390363 CALM3P0DP25 149 aa8.71□□□□□ -1.02
TRBV9-201ENST00000390363 FDX1P10109 184 aa8.71□□□□□ -1.02
TRBV9-201ENST00000390363 BMP3P12645 472 aa8.71□□□□□ -1.02
TRBV9-201ENST00000390363 VCAM1P19320 739 aa8.71□□□□□ -1.02
TRBV9-201ENST00000390363 CASTP20810 708 aaKnown RBP8.71□□□□□ -1.02
TRBV9-201ENST00000390363 HOXA7P31268 230 aaPredicted RBP8.71□□□□□ -1.02
TRBV9-201ENST00000390363 ANAPC15P60006 121 aa8.71□□□□□ -1.02
TRBV9-201ENST00000390363 CCNA1P78396 465 aa8.71□□□□□ -1.02
TRBV9-201ENST00000390363 JAG1P78504 1218 aa8.71□□□□□ -1.02
TRBV9-201ENST00000390363 COG2Q14746 738 aa8.71□□□□□ -1.02
TRBV9-201ENST00000390363 RCSD1Q6JBY9 416 aa8.71□□□□□ -1.02
TRBV9-201ENST00000390363 FAM160B2Q86V87 743 aa8.71□□□□□ -1.02
TRBV9-201ENST00000390363 LRRC47Q8N1G4 583 aaKnown RBP8.71□□□□□ -1.02
TRBV9-201ENST00000390363 PNMA1Q8ND90 353 aa8.71□□□□□ -1.02
TRBV9-201ENST00000390363 DCAF4Q8WV16 495 aa8.71□□□□□ -1.02
TRBV9-201ENST00000390363 C12orf42Q96LP6 360 aa8.71□□□□□ -1.02
TRBV9-201ENST00000390363 FEM1BQ9UK73 627 aa8.71□□□□□ -1.02
TRBV9-201ENST00000390363 CASP8AP2Q9UKL3 1982 aa8.7□□□□□ -1.02
TRBV9-201ENST00000390363 IGKV6D-41A0A0C4DH26 115 aa8.7□□□□□ -1.02
TRBV9-201ENST00000390363 A0A1W2PRG0 241 aa8.7□□□□□ -1.02
TRBV9-201ENST00000390363 DHX16O60231 1041 aaKnown RBP8.7□□□□□ -1.02
TRBV9-201ENST00000390363 NMT2O60551 498 aa8.7□□□□□ -1.02
TRBV9-201ENST00000390363 TBC1D8O95759 1140 aa8.7□□□□□ -1.02
TRBV9-201ENST00000390363 PARP1P09874 1014 aaKnown RBP8.7□□□□□ -1.02
TRBV9-201ENST00000390363 HOXD10P28358 340 aa8.7□□□□□ -1.02
TRBV9-201ENST00000390363 KIF5BP33176 963 aa8.7□□□□□ -1.02
TRBV9-201ENST00000390363 GNAQP50148 359 aa8.7□□□□□ -1.02
TRBV9-201ENST00000390363 STAT2P52630 851 aa8.7□□□□□ -1.02
TRBV9-201ENST00000390363 MLLT1Q03111 559 aaPredicted RBP8.7□□□□□ -1.02
TRBV9-201ENST00000390363 TRAF1Q13077 416 aa8.7□□□□□ -1.02
TRBV9-201ENST00000390363 ANKRD1Q15327 319 aa8.7□□□□□ -1.02
TRBV9-201ENST00000390363 SHROOM1Q2M3G4 852 aaPredicted RBP8.7□□□□□ -1.02
TRBV9-201ENST00000390363 GPATCH4Q5T3I0 446 aaKnown RBP8.7□□□□□ -1.02
TRBV9-201ENST00000390363 CATSPERGQ6ZRH7 1159 aa8.7□□□□□ -1.02
TRBV9-201ENST00000390363 FAM43AQ8N2R8 423 aa8.7□□□□□ -1.02
TRBV9-201ENST00000390363 MB21D1Q8N884 522 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms