RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 MTX1Q13505 466 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 GRIPAP1Q4V328 841 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 TPTE2Q6XPS3 522 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 GLT8D2Q9H1C3 349 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 GOLGA6AQ9NYA3 693 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 SAMD15Q9P1V8 674 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 ZNF215Q9UL58 517 aaPredicted RBP9.38□□□□□ -0.91
VPS36-201ENST00000378060 PDE8AO60658 829 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 ITGA6P23229 1130 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 CDC25BP30305 580 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 CALCOCO2Q13137 446 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 ITPK1Q13572 414 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 RUFY4Q6ZNE9 571 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 FCHSD1Q86WN1 690 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 LPIN2Q92539 896 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 SECISBP2LQ93073 1101 aaKnown RBP9.38□□□□□ -0.91
VPS36-201ENST00000378060 FAM89AQ96GI7 184 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 ZKSCAN3Q9BRR0 538 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 LSG1Q9H089 658 aaKnown RBP9.38□□□□□ -0.91
VPS36-201ENST00000378060 CCDC6Q16204 474 aa9.37□□□□□ -0.91
VPS36-201ENST00000378060 WHAMMP3Q1A5X7 153 aa9.37□□□□□ -0.91
VPS36-201ENST00000378060 BEND3Q5T5X7 828 aa9.37□□□□□ -0.91
VPS36-201ENST00000378060 CERS3Q8IU89 383 aa9.37□□□□□ -0.91
VPS36-201ENST00000378060 SMARCC2Q8TAQ2 1214 aa9.37□□□□□ -0.91
VPS36-201ENST00000378060 PPM1EQ8WY54 764 aa9.37□□□□□ -0.91
VPS36-201ENST00000378060 NOX5Q96PH1 765 aa9.37□□□□□ -0.91
VPS36-201ENST00000378060 NUCKS1Q9H1E3 243 aaKnown RBP9.37□□□□□ -0.91
VPS36-201ENST00000378060 NEURL1BA8MQ27 555 aa9.37□□□□□ -0.91
VPS36-201ENST00000378060 FAM13AO94988 1023 aa9.37□□□□□ -0.91
VPS36-201ENST00000378060 LDHBP07195 334 aaKnown RBP9.37□□□□□ -0.91
VPS36-201ENST00000378060 PFKFB1P16118 471 aa9.37□□□□□ -0.91
VPS36-201ENST00000378060 MAGEA1P43355 309 aa9.37□□□□□ -0.91
VPS36-201ENST00000378060 SLC9C1Q4G0N8 1177 aa9.37□□□□□ -0.91
VPS36-201ENST00000378060 IQCGQ9H095 443 aaKnown RBP9.37□□□□□ -0.91
VPS36-201ENST00000378060 TJP1Q07157 1748 aa9.37□□□□□ -0.91
VPS36-201ENST00000378060 PLEKHG2Q9H7P9 1386 aa9.37□□□□□ -0.91
VPS36-201ENST00000378060 A0A0D9SFI3 127 aa9.37□□□□□ -0.91
VPS36-201ENST00000378060 ATP8B1O43520 1251 aa9.37□□□□□ -0.91
VPS36-201ENST00000378060 ACTN4O43707 911 aaKnown RBP9.37□□□□□ -0.91
VPS36-201ENST00000378060 PARP1P09874 1014 aaKnown RBP9.37□□□□□ -0.91
VPS36-201ENST00000378060 OAS2P29728 719 aaKnown RBP9.37□□□□□ -0.91
VPS36-201ENST00000378060 LRMPQ12912 555 aa9.37□□□□□ -0.91
VPS36-201ENST00000378060 SLC4A8Q2Y0W8 1093 aa9.37□□□□□ -0.91
VPS36-201ENST00000378060 AMIGO3Q86WK7 504 aa9.37□□□□□ -0.91
VPS36-201ENST00000378060 HEG1Q9ULI3 1381 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 TLDC2A0PJX2 215 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 GOLGA6BA6NDN3 693 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 ST5P78524 1137 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 LETM2Q2VYF4 491 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 OR8K1Q8NGG5 319 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 KIAA1524Q8TCG1 905 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 CETN3O15182 167 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 CD2BP2O95400 341 aaKnown RBP9.36□□□□□ -0.91
VPS36-201ENST00000378060 PAK2Q13177 524 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 RAPGEF1Q13905 1077 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 ERCC6LQ2NKX8 1250 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 PIK3AP1Q6ZUJ8 805 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 HAUS7Q99871 368 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 SELENOSQ9BQE4 189 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 LRRC4BQ9NT99 713 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 SWAP70Q9UH65 585 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 ATP5DP30049 168 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 INPP5BP32019 993 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 ARHGAP25P42331 645 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 FAM196AQ6ZSG2 479 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 CEP128Q6ZU80 1094 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 KRT25Q7Z3Z0 450 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 CEP57Q86XR8 500 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 PPP1R14CQ8TAE6 165 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 PHKBQ93100 1093 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 LZTS2Q9BRK4 669 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 COPRSQ9NQ92 184 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 ERBB4Q15303 1308 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 LOC102724428A0A0B4J2F2 783 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 STX10O60499 249 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 SIK1P57059 783 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 AKNAD1Q5T1N1 836 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 FBXO18Q8NFZ0 1043 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 BICD1Q96G01 975 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 ARMT1Q9H993 441 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 RTEL1Q9NZ71 1219 aa9.36□□□□□ -0.91
VPS36-201ENST00000378060 CLUL1Q15846 466 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 GBP6Q6ZN66 633 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 NOSTRINQ8IVI9 506 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 RASEFQ8IZ41 740 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 SREK1Q8WXA9 508 aaKnown RBP9.35□□□□□ -0.91
VPS36-201ENST00000378060 IMPG2Q9BZV3 1241 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 PCDHA7Q9UN72 937 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 ATP6V0A2Q9Y487 856 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 SAR1BQ9Y6B6 198 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 MRVI1Q9Y6F6 885 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 MYH14Q7Z406 1995 aaKnown RBP9.35□□□□□ -0.91
VPS36-201ENST00000378060 NBPF26B4DH59 902 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 APBA3O96018 575 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 SF3B2Q13435 895 aaKnown RBP9.35□□□□□ -0.91
VPS36-201ENST00000378060 SETDB1Q15047 1291 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 CFAP221Q4G0U5 840 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 NBPF14Q5TI25 921 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 NBPF10Q6P3W6 841 aaKnown RBP9.35□□□□□ -0.91
VPS36-201ENST00000378060 DEFB132Q7Z7B7 95 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms