RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 GPBP1Q86WP2 473 aa15.13■□□□□ 0.01
GPC6-201ENST00000377047 BLIDQ8IZY5 108 aa15.13■□□□□ 0.01
GPC6-201ENST00000377047 DBNDD1Q9H9R9 158 aa15.13■□□□□ 0.01
GPC6-201ENST00000377047 BCRP11274 1271 aa15.13■□□□□ 0.01
GPC6-201ENST00000377047 P4HA1P13674 534 aa15.13■□□□□ 0.01
GPC6-201ENST00000377047 TECP42680 631 aa15.13■□□□□ 0.01
GPC6-201ENST00000377047 LRMPQ12912 555 aa15.13■□□□□ 0.01
GPC6-201ENST00000377047 EAF2Q96CJ1 260 aaPredicted RBP15.13■□□□□ 0.01
GPC6-201ENST00000377047 CTTNBP2NLQ9P2B4 639 aa15.13■□□□□ 0.01
GPC6-201ENST00000377047 CCPG1Q9ULG6 757 aa15.13■□□□□ 0.01
GPC6-201ENST00000377047 KLRF2D3W0D1 207 aa15.13■□□□□ 0.01
GPC6-201ENST00000377047 IL6STP40189 918 aaPredicted RBP15.13■□□□□ 0.01
GPC6-201ENST00000377047 PHKA1P46020 1223 aa15.13■□□□□ 0.01
GPC6-201ENST00000377047 NLRP12P59046 1061 aa15.13■□□□□ 0.01
GPC6-201ENST00000377047 SLFN13Q68D06 897 aa15.13■□□□□ 0.01
GPC6-201ENST00000377047 ATF5Q9Y2D1 282 aaPredicted RBP15.13■□□□□ 0.01
GPC6-201ENST00000377047 TNKSO95271 1327 aa15.13■□□□□ 0.01
GPC6-201ENST00000377047 KIF24Q5T7B8 1368 aa15.13■□□□□ 0.01
GPC6-201ENST00000377047 HSPA4P34932 840 aa15.13■□□□□ 0.01
GPC6-201ENST00000377047 GPKOWQ92917 476 aaPredicted RBP eCLIP15.13■□□□□ 0.01
GPC6-201ENST00000377047 FANCCQ00597 558 aa15.12■□□□□ 0.01
GPC6-201ENST00000377047 KMT5BQ4FZB7 885 aa15.12■□□□□ 0.01
GPC6-201ENST00000377047 XKR9Q5GH70 373 aa15.12■□□□□ 0.01
GPC6-201ENST00000377047 MED10Q9BTT4 135 aa15.12■□□□□ 0.01
GPC6-201ENST00000377047 NUP58Q9BVL2 599 aa15.12■□□□□ 0.01
GPC6-201ENST00000377047 CRCPO75575 148 aa15.12■□□□□ 0.01
GPC6-201ENST00000377047 XRCC6P12956 609 aaKnown RBP eCLIP15.12■□□□□ 0.01
GPC6-201ENST00000377047 CCDC6Q16204 474 aa15.12■□□□□ 0.01
GPC6-201ENST00000377047 ARHGAP44Q17R89 818 aa15.12■□□□□ 0.01
GPC6-201ENST00000377047 SLC9C1Q4G0N8 1177 aa15.12■□□□□ 0.01
GPC6-201ENST00000377047 ZBTB8OSQ8IWT0 167 aa15.12■□□□□ 0.01
GPC6-201ENST00000377047 GPR161Q8N6U8 529 aaKnown RBP15.12■□□□□ 0.01
GPC6-201ENST00000377047 MRRFQ96E11 262 aaKnown RBP15.12■□□□□ 0.01
GPC6-201ENST00000377047 KDM5DQ9BY66 1539 aa15.12■□□□□ 0.01
GPC6-201ENST00000377047 FAM170AA1A519 330 aa15.12■□□□□ 0.01
GPC6-201ENST00000377047 CYP2J2P51589 502 aa15.12■□□□□ 0.01
GPC6-201ENST00000377047 PPP2R5DQ14738 602 aa15.12■□□□□ 0.01
GPC6-201ENST00000377047 SSH3Q8TE77 659 aa15.12■□□□□ 0.01
GPC6-201ENST00000377047 SMC6Q96SB8 1091 aa15.12■□□□□ 0.01
GPC6-201ENST00000377047 PUS3Q9BZE2 481 aaKnown RBP15.12■□□□□ 0.01
GPC6-201ENST00000377047 LEMD3Q9Y2U8 911 aa15.12■□□□□ 0.01
GPC6-201ENST00000377047 THRAP3Q9Y2W1 955 aaKnown RBP15.12■□□□□ 0.01
GPC6-201ENST00000377047 DYNC1I1O14576 645 aa15.12■□□□□ 0.01
GPC6-201ENST00000377047 POLA2Q14181 598 aa15.12■□□□□ 0.01
GPC6-201ENST00000377047 GEN1Q17RS7 908 aa15.12■□□□□ 0.01
GPC6-201ENST00000377047 CCDC125Q86Z20 511 aa15.12■□□□□ 0.01
GPC6-201ENST00000377047 RIOK1Q9BRS2 568 aaKnown RBP15.12■□□□□ 0.01
GPC6-201ENST00000377047 KCNG1Q9UIX4 513 aa15.12■□□□□ 0.01
GPC6-201ENST00000377047 ADORA1P30542 326 aa15.12■□□□□ 0.01
GPC6-201ENST00000377047 YARSP54577 528 aaKnown RBP15.12■□□□□ 0.01
GPC6-201ENST00000377047 CSRNP1Q96S65 589 aa15.12■□□□□ 0.01
GPC6-201ENST00000377047 DDX23Q9BUQ8 820 aaKnown RBP15.12■□□□□ 0.01
GPC6-201ENST00000377047 PALM3A6NDB9 673 aaPredicted RBP15.11■□□□□ 0.01
GPC6-201ENST00000377047 IGBP1P78318 339 aa15.11■□□□□ 0.01
GPC6-201ENST00000377047 PROSER3Q2NL68 480 aa15.11■□□□□ 0.01
GPC6-201ENST00000377047 NSMCE1Q8WV22 266 aa15.11■□□□□ 0.01
GPC6-201ENST00000377047 ZNF365Q70YC5 407 aa15.11■□□□□ 0.01
GPC6-201ENST00000377047 ARHGEF25Q86VW2 580 aa15.11■□□□□ 0.01
GPC6-201ENST00000377047 CCT6BQ92526 530 aa15.11■□□□□ 0.01
GPC6-201ENST00000377047 PCDHB13Q9Y5F0 798 aa15.11■□□□□ 0.01
GPC6-201ENST00000377047 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.11■□□□□ 0.01
GPC6-201ENST00000377047 PDE8BO95263 885 aa15.11■□□□□ 0.01
GPC6-201ENST00000377047 HSPD1P10809 573 aaKnown RBP15.11■□□□□ 0.01
GPC6-201ENST00000377047 LIG4P49917 911 aa15.11■□□□□ 0.01
GPC6-201ENST00000377047 SUGCTQ9HAC7 445 aa15.11■□□□□ 0.01
GPC6-201ENST00000377047 PPANQ9NQ55 473 aaKnown RBP15.11■□□□□ 0.01
GPC6-201ENST00000377047 ZKSCAN5Q9Y2L8 839 aa15.11■□□□□ 0.01
GPC6-201ENST00000377047 ABCC4O15439 1325 aa15.11■□□□□ 0.01
GPC6-201ENST00000377047 DNAJC21Q5F1R6 531 aaKnown RBP15.11■□□□□ 0.01
GPC6-201ENST00000377047 MYO1AQ9UBC5 1043 aa15.11■□□□□ 0.01
GPC6-201ENST00000377047 DDX25Q9UHL0 483 aaKnown RBP15.11■□□□□ 0.01
GPC6-201ENST00000377047 NR1I2O75469 434 aa15.11■□□□□ 0.01
GPC6-201ENST00000377047 IRX5P78411 483 aaPredicted RBP15.11■□□□□ 0.01
GPC6-201ENST00000377047 DPP9Q86TI2 863 aa15.11■□□□□ 0.01
GPC6-201ENST00000377047 TTLL3Q9Y4R7 772 aa15.11■□□□□ 0.01
GPC6-201ENST00000377047 WDR17Q8IZU2 1322 aa15.11■□□□□ 0.01
GPC6-201ENST00000377047 PTH1RQ03431 593 aa15.11■□□□□ 0.01
GPC6-201ENST00000377047 MCTP2Q6DN12 878 aa15.11■□□□□ 0.01
GPC6-201ENST00000377047 SLFN12Q8IYM2 578 aa15.11■□□□□ 0.01
GPC6-201ENST00000377047 SPICE1Q8N0Z3 855 aa15.11■□□□□ 0.01
GPC6-201ENST00000377047 TEKT3Q9BXF9 490 aa15.11■□□□□ 0.01
GPC6-201ENST00000377047 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.11■□□□□ 0.013e-6■■□□□ 11.9
GPC6-201ENST00000377047 PCDHA12Q9UN75 941 aa15.11■□□□□ 0.01
GPC6-201ENST00000377047 ANKS4BQ8N8V4 417 aa15.1■□□□□ 0.01
GPC6-201ENST00000377047 FANCBQ8NB91 859 aa15.1■□□□□ 0.01
GPC6-201ENST00000377047 TRIM7Q9C029 511 aa15.1■□□□□ 0.01
GPC6-201ENST00000377047 CALCOCO1Q9P1Z2 691 aa15.1■□□□□ 0.01
GPC6-201ENST00000377047 SERTAD1Q9UHV2 236 aa15.1■□□□□ 0.01
GPC6-201ENST00000377047 SMC1BQ8NDV3 1235 aa15.1■□□□□ 0.01
GPC6-201ENST00000377047 FAM193BQ96PV7 902 aaPredicted RBP15.1■□□□□ 0.01
GPC6-201ENST00000377047 ME3Q16798 604 aa15.1■□□□□ 0.01
GPC6-201ENST00000377047 LONRF3Q496Y0 759 aa15.1■□□□□ 0.01
GPC6-201ENST00000377047 PLA2G4DQ86XP0 818 aa15.1■□□□□ 0.01
GPC6-201ENST00000377047 GTF3C6Q969F1 213 aa15.1■□□□□ 0.01
GPC6-201ENST00000377047 ZMYM6O95789 1325 aa15.1■□□□□ 0.01
GPC6-201ENST00000377047 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.1■□□□□ 0.01
GPC6-201ENST00000377047 BIRC2Q13490 618 aa15.1■□□□□ 0.01
GPC6-201ENST00000377047 PNOCQ13519 176 aa15.1■□□□□ 0.01
GPC6-201ENST00000377047 SEC31BQ9NQW1 1179 aa15.1■□□□□ 0.01
GPC6-201ENST00000377047 KDM2BQ8NHM5 1336 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms