RNA–Protein interactions for RNA: ENST00000376895.2

SSX3-203, Transcript of SSX family member 3, humanhuman

TSL 5

Gene SSX3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-203ENST00000376895 PCDHGC5Q9Y5F6 944 aa7.59□□□□□ -1.19
SSX3-203ENST00000376895 RPRD2Q5VT52 1461 aaKnown RBP7.59□□□□□ -1.19
SSX3-203ENST00000376895 CCDC144AA2RUR9 1427 aa7.59□□□□□ -1.19
SSX3-203ENST00000376895 SHISA8B8ZZ34 492 aa7.58□□□□□ -1.2
SSX3-203ENST00000376895 TNFRSF10CO14798 259 aa7.58□□□□□ -1.2
SSX3-203ENST00000376895 ADAM11O75078 769 aa7.58□□□□□ -1.2
SSX3-203ENST00000376895 BCRP11274 1271 aa7.58□□□□□ -1.2
SSX3-203ENST00000376895 GRK4P32298 578 aa7.58□□□□□ -1.2
SSX3-203ENST00000376895 RGL3Q3MIN7 710 aa7.58□□□□□ -1.2
SSX3-203ENST00000376895 ZC3H12AQ5D1E8 599 aaKnown RBP7.58□□□□□ -1.2
SSX3-203ENST00000376895 DMRTC2Q8IXT2 367 aaPredicted RBP7.58□□□□□ -1.2
SSX3-203ENST00000376895 ST13P5Q8NFI4 369 aaPredicted RBP7.58□□□□□ -1.2
SSX3-203ENST00000376895 APPBP2Q92624 585 aa7.58□□□□□ -1.2
SSX3-203ENST00000376895 ATG4CQ96DT6 458 aa7.58□□□□□ -1.2
SSX3-203ENST00000376895 WNT10AQ9GZT5 417 aa7.58□□□□□ -1.2
SSX3-203ENST00000376895 SLKQ9H2G2 1235 aaPredicted RBP7.58□□□□□ -1.2
SSX3-203ENST00000376895 PHAXQ9H814 394 aaKnown RBP7.58□□□□□ -1.2
SSX3-203ENST00000376895 CNNM2Q9H8M5 875 aa7.58□□□□□ -1.2
SSX3-203ENST00000376895 NPATQ14207 1427 aa7.58□□□□□ -1.2
SSX3-203ENST00000376895 TONSLQ96HA7 1378 aa7.58□□□□□ -1.2
SSX3-203ENST00000376895 MROH1Q8NDA8 1641 aa7.57□□□□□ -1.2
SSX3-203ENST00000376895 SLC22A31A6NKX4 558 aa7.57□□□□□ -1.2
SSX3-203ENST00000376895 ERVK-24P63145 666 aa7.57□□□□□ -1.2
SSX3-203ENST00000376895 ID3Q02535 119 aa7.57□□□□□ -1.2
SSX3-203ENST00000376895 IDI1Q13907 227 aa7.57□□□□□ -1.2
SSX3-203ENST00000376895 NCAPHQ15003 741 aa7.57□□□□□ -1.2
SSX3-203ENST00000376895 C2orf27AQ580R0 203 aa7.57□□□□□ -1.2
SSX3-203ENST00000376895 TAF7LQ5H9L4 462 aa7.57□□□□□ -1.2
SSX3-203ENST00000376895 CDCP2Q5VXM1 449 aa7.57□□□□□ -1.2
SSX3-203ENST00000376895 INTS3Q68E01 1043 aaKnown RBP7.57□□□□□ -1.2
SSX3-203ENST00000376895 VHLLQ6RSH7 139 aa7.57□□□□□ -1.2
SSX3-203ENST00000376895 C12orf40Q86WS4 652 aa7.57□□□□□ -1.2
SSX3-203ENST00000376895 HOMER1Q86YM7 354 aa7.57□□□□□ -1.2
SSX3-203ENST00000376895 LILRB2Q8N423 598 aa7.57□□□□□ -1.2
SSX3-203ENST00000376895 ZNF669Q96BR6 464 aaPredicted RBP7.57□□□□□ -1.2
SSX3-203ENST00000376895 RAD18Q9NS91 495 aa7.57□□□□□ -1.2
SSX3-203ENST00000376895 HIF3AQ9Y2N7 669 aa7.57□□□□□ -1.2
SSX3-203ENST00000376895 CSADQ9Y600 493 aa7.57□□□□□ -1.2
SSX3-203ENST00000376895 PTPRTO14522 1441 aa7.57□□□□□ -1.2
SSX3-203ENST00000376895 TET3O43151 1660 aa7.57□□□□□ -1.2
SSX3-203ENST00000376895 UPK3BL1B0FP48 263 aa7.56□□□□□ -1.2
SSX3-203ENST00000376895 UPK3BL2E5RIL1 263 aa7.56□□□□□ -1.2
SSX3-203ENST00000376895 TMPRSS2O15393 492 aa7.56□□□□□ -1.2
SSX3-203ENST00000376895 DNAJA2O60884 412 aa7.56□□□□□ -1.2
SSX3-203ENST00000376895 ACRP10323 421 aa7.56□□□□□ -1.2
SSX3-203ENST00000376895 RAG1P15918 1043 aa7.56□□□□□ -1.2
SSX3-203ENST00000376895 DUOXA2Q1HG44 320 aa7.56□□□□□ -1.2
SSX3-203ENST00000376895 ARSHQ5FYA8 562 aa7.56□□□□□ -1.2
SSX3-203ENST00000376895 UNC5AQ6ZN44 842 aa7.56□□□□□ -1.2
SSX3-203ENST00000376895 EEPD1Q7L9B9 569 aa7.56□□□□□ -1.2
SSX3-203ENST00000376895 THAP3Q8WTV1 239 aaPredicted RBP7.56□□□□□ -1.2
SSX3-203ENST00000376895 TMEM260Q9NX78 707 aa7.56□□□□□ -1.2
SSX3-203ENST00000376895 EFCAB6Q5THR3 1501 aa7.56□□□□□ -1.2
SSX3-203ENST00000376895 TNRQ92752 1358 aa7.56□□□□□ -1.2
SSX3-203ENST00000376895 ZC3H13Q5T200 1668 aaKnown RBP7.55□□□□□ -1.2
SSX3-203ENST00000376895 ESYT3A0FGR9 886 aa7.55□□□□□ -1.2
SSX3-203ENST00000376895 FANCGO15287 622 aa7.55□□□□□ -1.2
SSX3-203ENST00000376895 DDX3YO15523 660 aaKnown RBP7.55□□□□□ -1.2
SSX3-203ENST00000376895 DEAF1O75398 565 aaPredicted RBP7.55□□□□□ -1.2
SSX3-203ENST00000376895 SLURP2P0DP57 97 aa7.55□□□□□ -1.2
SSX3-203ENST00000376895 DGKGP49619 791 aa7.55□□□□□ -1.2
SSX3-203ENST00000376895 YARSP54577 528 aaKnown RBP7.55□□□□□ -1.2
SSX3-203ENST00000376895 RING1Q06587 406 aa7.55□□□□□ -1.2
SSX3-203ENST00000376895 SSRP1Q08945 709 aaKnown RBP7.55□□□□□ -1.2
SSX3-203ENST00000376895 ZYXQ15942 572 aaKnown RBP7.55□□□□□ -1.2
SSX3-203ENST00000376895 AKAP4Q5JQC9 854 aa7.55□□□□□ -1.2
SSX3-203ENST00000376895 PPM1JQ5JR12 505 aa7.55□□□□□ -1.2
SSX3-203ENST00000376895 EXOSC6Q5RKV6 272 aaKnown RBP7.55□□□□□ -1.2
SSX3-203ENST00000376895 ZBTB37Q5TC79 503 aa7.55□□□□□ -1.2
SSX3-203ENST00000376895 MRM1Q6IN84 353 aaKnown RBP7.55□□□□□ -1.2
SSX3-203ENST00000376895 FAM13CQ8NE31 585 aa7.55□□□□□ -1.2
SSX3-203ENST00000376895 UBASH3BQ8TF42 649 aa7.55□□□□□ -1.2
SSX3-203ENST00000376895 ACSF2Q96CM8 615 aaPredicted RBP7.55□□□□□ -1.2
SSX3-203ENST00000376895 RUSC1Q9BVN2 902 aa7.55□□□□□ -1.2
SSX3-203ENST00000376895 KANSL2Q9H9L4 492 aa7.55□□□□□ -1.2
SSX3-203ENST00000376895 PRKAB1Q9Y478 270 aa7.55□□□□□ -1.2
SSX3-203ENST00000376895 PLA2R1Q13018 1463 aa7.55□□□□□ -1.2
SSX3-203ENST00000376895 RPGRIP1LQ68CZ1 1315 aa7.54□□□□□ -1.2
SSX3-203ENST00000376895 KDM2BQ8NHM5 1336 aa7.54□□□□□ -1.2
SSX3-203ENST00000376895 NOS1P29475 1434 aa7.54□□□□□ -1.2
SSX3-203ENST00000376895 DLGAP3O95886 979 aa7.54□□□□□ -1.2
SSX3-203ENST00000376895 RAC1P63000 192 aa7.54□□□□□ -1.2
SSX3-203ENST00000376895 COL9A3Q14050 684 aaPredicted RBP7.54□□□□□ -1.2
SSX3-203ENST00000376895 PTPROQ16827 1216 aa7.54□□□□□ -1.2
SSX3-203ENST00000376895 TRAPPC3LQ5T215 181 aa7.54□□□□□ -1.2
SSX3-203ENST00000376895 ILDR2Q71H61 639 aa7.54□□□□□ -1.2
SSX3-203ENST00000376895 SLFN12Q8IYM2 578 aa7.54□□□□□ -1.2
SSX3-203ENST00000376895 THEMISQ8N1K5 641 aaPredicted RBP7.54□□□□□ -1.2
SSX3-203ENST00000376895 ZCRB1Q8TBF4 217 aaKnown RBP7.54□□□□□ -1.2
SSX3-203ENST00000376895 SLC9A7Q96T83 725 aa7.54□□□□□ -1.2
SSX3-203ENST00000376895 TMX1Q9H3N1 280 aa7.54□□□□□ -1.2
SSX3-203ENST00000376895 KCNK4Q9NYG8 393 aa7.54□□□□□ -1.2
SSX3-203ENST00000376895 PFDN2Q9UHV9 154 aa7.54□□□□□ -1.2
SSX3-203ENST00000376895 AP4E1Q9UPM8 1137 aa7.54□□□□□ -1.2
SSX3-203ENST00000376895 SIGLEC1Q9BZZ2 1709 aa7.54□□□□□ -1.2
SSX3-203ENST00000376895 CLTCQ00610 1675 aaKnown RBP7.54□□□□□ -1.2
SSX3-203ENST00000376895 CAMSAP1Q5T5Y3 1602 aa7.53□□□□□ -1.2
SSX3-203ENST00000376895 CEP152O94986 1710 aa7.53□□□□□ -1.2
SSX3-203ENST00000376895 FAM86C2PA6NEL3 165 aa7.53□□□□□ -1.2
SSX3-203ENST00000376895 CELA2BP08218 269 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms