RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 RAPH1Q70E73 1250 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 NAPBQ9H115 298 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 TMA7Q9Y2S6 64 aaKnown RBP6.54□□□□□ -1.36
SCN2A-202ENST00000375427 AXIN2Q9Y2T1 843 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 BTN3A3O00478 584 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 PLS3P13797 630 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 IFNA8P32881 189 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 PSME3P61289 254 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 ATP6V0A2Q9Y487 856 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 ICE1Q9Y2F5 2266 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 CBFA2T3O75081 653 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 ANKS6Q68DC2 871 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 CC2D1AQ6P1N0 951 aaPredicted RBP6.54□□□□□ -1.36
SCN2A-202ENST00000375427 GIT1Q9Y2X7 761 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 KCNA1Q09470 495 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 WASHC4Q2M389 1173 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 S100PBPQ96BU1 408 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 B3GALT6Q96L58 329 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 LRRC37BQ96QE4 947 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 ZWILCHQ9H900 591 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 TUBA8Q9NY65 449 aaPredicted RBP6.54□□□□□ -1.36
SCN2A-202ENST00000375427 WARS2Q9UGM6 360 aaKnown RBP6.54□□□□□ -1.36
SCN2A-202ENST00000375427 PACSIN2Q9UNF0 486 aaPredicted RBP6.54□□□□□ -1.36
SCN2A-202ENST00000375427 KLHL20Q9Y2M5 609 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 EIF3BP55884 814 aaKnown RBP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 PDAP1Q13442 181 aaKnown RBP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 CDC37Q16543 378 aaPredicted RBP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 TINF2Q9BSI4 451 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 ING2Q9H160 280 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 MORC2Q9Y6X9 1032 aaPredicted RBP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 SYCE3A1L190 88 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 SMCO2A6NFE2 343 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 TUBGCP2Q9BSJ2 902 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 TRIM15Q9C019 465 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 GID8Q9NWU2 228 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 AKR1D1P51857 326 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 CAPRIN1Q14444 709 aaKnown RBP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 TXNDC11Q6PKC3 985 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 HDGFL2Q7Z4V5 671 aaPredicted RBP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 LSM14AQ8ND56 463 aaKnown RBP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 TNIP2Q8NFZ5 429 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 CDC5LQ99459 802 aaKnown RBP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 SUCLA2Q9P2R7 463 aaPredicted RBP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 SLC13A4Q9UKG4 626 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 STX6O43752 255 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 CDC45O75419 566 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 SMNDC1O75940 238 aaKnown RBP eCLIP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 BRD1O95696 1058 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 PSMC3P17980 439 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 ITGAXP20702 1163 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 MED21Q13503 144 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 ZSCAN26Q16670 478 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 MTERF3Q96E29 417 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 CARD10Q9BWT7 1032 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 IFIH1Q9BYX4 1025 aaKnown RBP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 A0A1W2PRG6 482 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 RGS10O43665 173 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 MFN2O95140 757 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 SNX4O95219 450 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 SPIRE1Q08AE8 756 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 BIRC3Q13489 604 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 SESTD1Q86VW0 696 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 OSCP1Q8WVF1 389 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 MTA3Q9BTC8 594 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 DDHD2O94830 711 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 PSMC6P62333 389 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 UBE3AQ05086 875 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 RNASELQ05823 741 aaKnown RBP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 CCDC142Q17RM4 750 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 NOP9Q86U38 636 aaKnown RBP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 FAM210AQ96ND0 272 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 OSBPL10Q9BXB5 764 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 C8orf4Q9NR00 106 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 STRIP2Q9ULQ0 834 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 SNX5Q9Y5X3 404 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 EID1Q9Y6B2 187 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 TRIM13O60858 407 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 UFL1O94874 794 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 AMPD3Q01432 767 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 RASA3Q14644 834 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 CNDP1Q96KN2 507 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 SRGAP3O43295 1099 aa6.52□□□□□ -1.36
SCN2A-202ENST00000375427 EIF2S1P05198 315 aaKnown RBP6.52□□□□□ -1.36
SCN2A-202ENST00000375427 KCNA2P16389 499 aa6.52□□□□□ -1.36
SCN2A-202ENST00000375427 MMRN1Q13201 1228 aa6.52□□□□□ -1.36
SCN2A-202ENST00000375427 DAB2IPQ5VWQ8 1189 aa6.52□□□□□ -1.36
SCN2A-202ENST00000375427 KAZNQ674X7 775 aa6.52□□□□□ -1.36
SCN2A-202ENST00000375427 ESRP1Q6NXG1 681 aaKnown RBP6.52□□□□□ -1.36
SCN2A-202ENST00000375427 CIDECQ96AQ7 238 aaPredicted RBP6.52□□□□□ -1.36
SCN2A-202ENST00000375427 NAF1Q96HR8 494 aaKnown RBP6.52□□□□□ -1.36
SCN2A-202ENST00000375427 IARS2Q9NSE4 1012 aaKnown RBP6.52□□□□□ -1.36
SCN2A-202ENST00000375427 RNF216Q9NWF9 866 aaPredicted RBP6.52□□□□□ -1.36
SCN2A-202ENST00000375427 STX18Q9P2W9 335 aaKnown RBP6.52□□□□□ -1.36
SCN2A-202ENST00000375427 AKR1B10O60218 316 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 SSRP1Q08945 709 aaKnown RBP6.52□□□□□ -1.37
SCN2A-202ENST00000375427 EXOC3L4Q17RC7 722 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 HSP90AA4PQ58FG1 418 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 ABRAXAS1Q6UWZ7 409 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 IKBIPQ70UQ0 350 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 ANKRD13AQ8IZ07 590 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms