RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 SRFP11831 508 aa7.49□□□□□ -1.21
PMS1-202ENST00000374826 DAB2P98082 770 aa7.49□□□□□ -1.21
PMS1-202ENST00000374826 XPCQ01831 940 aaPredicted RBP7.49□□□□□ -1.21
PMS1-202ENST00000374826 PSMD2Q13200 908 aa7.49□□□□□ -1.21
PMS1-202ENST00000374826 LCE5AQ5TCM9 118 aa7.49□□□□□ -1.21
PMS1-202ENST00000374826 FBXO33Q7Z6M2 555 aa7.49□□□□□ -1.21
PMS1-202ENST00000374826 BIVM-ERCC5R4GMW8 1640 aa7.49□□□□□ -1.21
PMS1-202ENST00000374826 ERCC3P19447 782 aa7.48□□□□□ -1.21
PMS1-202ENST00000374826 PDE4BQ07343 736 aa7.48□□□□□ -1.21
PMS1-202ENST00000374826 GPR62Q9BZJ7 368 aa7.48□□□□□ -1.21
PMS1-202ENST00000374826 RNF32Q9H0A6 362 aa7.48□□□□□ -1.21
PMS1-202ENST00000374826 C19orf44Q9H6X5 657 aa7.48□□□□□ -1.21
PMS1-202ENST00000374826 GPATCH2Q9NW75 528 aa7.48□□□□□ -1.21
PMS1-202ENST00000374826 CUX1P39880 1505 aa7.47□□□□□ -1.21
PMS1-202ENST00000374826 SYNJ1O43426 1573 aa7.47□□□□□ -1.21
PMS1-202ENST00000374826 NUAK1O60285 661 aa7.47□□□□□ -1.21
PMS1-202ENST00000374826 INHBBP09529 407 aa7.47□□□□□ -1.21
PMS1-202ENST00000374826 LINC00310P59036 64 aa7.47□□□□□ -1.21
PMS1-202ENST00000374826 TSNAXIP1Q2TAA8 658 aa7.47□□□□□ -1.21
PMS1-202ENST00000374826 MEI1Q5TIA1 1274 aa7.47□□□□□ -1.21
PMS1-202ENST00000374826 TMC4Q7Z404 712 aa7.47□□□□□ -1.21
PMS1-202ENST00000374826 PDZD8Q8NEN9 1154 aa7.47□□□□□ -1.21
PMS1-202ENST00000374826 PPP1R13LQ8WUF5 828 aa7.47□□□□□ -1.21
PMS1-202ENST00000374826 ACSF2Q96CM8 615 aaPredicted RBP7.47□□□□□ -1.21
PMS1-202ENST00000374826 KRTAP4-5Q9BYR2 181 aa7.47□□□□□ -1.21
PMS1-202ENST00000374826 MIR1-1HGQ9H1L0 117 aa7.47□□□□□ -1.21
PMS1-202ENST00000374826 ADAM30Q9UKF2 790 aa7.47□□□□□ -1.21
PMS1-202ENST00000374826 TARBP1Q13395 1621 aaKnown RBP7.46□□□□□ -1.21
PMS1-202ENST00000374826 ZGLP1P0C6A0 271 aa7.46□□□□□ -1.22
PMS1-202ENST00000374826 LIG3P49916 1009 aa7.46□□□□□ -1.22
PMS1-202ENST00000374826 EGR3Q06889 387 aa7.46□□□□□ -1.22
PMS1-202ENST00000374826 MAP3K11Q16584 847 aa7.46□□□□□ -1.22
PMS1-202ENST00000374826 TSPYL5Q86VY4 417 aaPredicted RBP7.46□□□□□ -1.22
PMS1-202ENST00000374826 LILRA2Q8N149 483 aa7.46□□□□□ -1.22
PMS1-202ENST00000374826 FAM161BQ96MY7 647 aa7.46□□□□□ -1.22
PMS1-202ENST00000374826 DUSP13Q9UII6 198 aa7.46□□□□□ -1.22
PMS1-202ENST00000374826 PBRM1Q86U86 1689 aa7.46□□□□□ -1.22
PMS1-202ENST00000374826 EIF4G3O43432 1585 aaKnown RBP7.46□□□□□ -1.22
PMS1-202ENST00000374826 TFE3P19532 575 aaPredicted RBP7.45□□□□□ -1.22
PMS1-202ENST00000374826 TAGLNQ01995 201 aaKnown RBP7.45□□□□□ -1.22
PMS1-202ENST00000374826 RPL6Q02878 288 aaKnown RBP7.45□□□□□ -1.22
PMS1-202ENST00000374826 OXR1Q8N573 874 aa7.45□□□□□ -1.22
PMS1-202ENST00000374826 IRF2BPLQ9H1B7 796 aa7.45□□□□□ -1.22
PMS1-202ENST00000374826 KCNH3Q9ULD8 1083 aa7.45□□□□□ -1.22
PMS1-202ENST00000374826 TOP2BQ02880 1626 aa7.45□□□□□ -1.22
PMS1-202ENST00000374826 CTSWP56202 376 aa7.44□□□□□ -1.22
PMS1-202ENST00000374826 NR0B2Q15466 257 aa7.44□□□□□ -1.22
PMS1-202ENST00000374826 IRF2BP1Q8IU81 584 aa7.44□□□□□ -1.22
PMS1-202ENST00000374826 DTWD2Q8NBA8 298 aa7.44□□□□□ -1.22
PMS1-202ENST00000374826 JARID2Q92833 1246 aaPredicted RBP7.44□□□□□ -1.22
PMS1-202ENST00000374826 MCOLN1Q9GZU1 580 aa7.44□□□□□ -1.22
PMS1-202ENST00000374826 POLA1P09884 1462 aaPredicted RBP7.43□□□□□ -1.22
PMS1-202ENST00000374826 FGD5Q6ZNL6 1462 aa7.43□□□□□ -1.22
PMS1-202ENST00000374826 UPK3BL1B0FP48 263 aa7.43□□□□□ -1.22
PMS1-202ENST00000374826 UPK3BL2E5RIL1 263 aa7.43□□□□□ -1.22
PMS1-202ENST00000374826 CTSHP09668 335 aa7.43□□□□□ -1.22
PMS1-202ENST00000374826 BUD31P41223 144 aaPredicted RBP7.43□□□□□ -1.22
PMS1-202ENST00000374826 ST13P50502 369 aaKnown RBP7.43□□□□□ -1.22
PMS1-202ENST00000374826 TAF1CQ15572 869 aaPredicted RBP7.43□□□□□ -1.22
PMS1-202ENST00000374826 TIGD5Q53EQ6 642 aa7.43□□□□□ -1.22
PMS1-202ENST00000374826 DHX38Q92620 1227 aaKnown RBP7.43□□□□□ -1.22
PMS1-202ENST00000374826 C20orf173Q96LM9 149 aa7.43□□□□□ -1.22
PMS1-202ENST00000374826 SLC6A17Q9H1V8 727 aa7.43□□□□□ -1.22
PMS1-202ENST00000374826 MRS2Q9HD23 443 aa7.43□□□□□ -1.22
PMS1-202ENST00000374826 CHD1O14646 1710 aa7.43□□□□□ -1.22
PMS1-202ENST00000374826 MYOCOSA0A1B0GUC4 107 aa7.42□□□□□ -1.22
PMS1-202ENST00000374826 FITM1A5D6W6 292 aa7.42□□□□□ -1.22
PMS1-202ENST00000374826 SORBS3O60504 671 aa7.42□□□□□ -1.22
PMS1-202ENST00000374826 PEX10O60683 326 aa7.42□□□□□ -1.22
PMS1-202ENST00000374826 LRRN2O75325 713 aa7.42□□□□□ -1.22
PMS1-202ENST00000374826 HOXA5P20719 270 aa7.42□□□□□ -1.22
PMS1-202ENST00000374826 DLG4P78352 724 aa7.42□□□□□ -1.22
PMS1-202ENST00000374826 SPPL2CQ8IUH8 684 aa7.42□□□□□ -1.22
PMS1-202ENST00000374826 BAHD1Q8TBE0 780 aaPredicted RBP7.42□□□□□ -1.22
PMS1-202ENST00000374826 CYB5D2Q8WUJ1 264 aa7.42□□□□□ -1.22
PMS1-202ENST00000374826 CRELD1Q96HD1 420 aa7.42□□□□□ -1.22
PMS1-202ENST00000374826 CWC22Q9HCG8 908 aaKnown RBP7.42□□□□□ -1.22
PMS1-202ENST00000374826 YBX2Q9Y2T7 364 aaKnown RBP7.42□□□□□ -1.22
PMS1-202ENST00000374826 PCDHA11Q9Y5I1 949 aa7.42□□□□□ -1.22
PMS1-202ENST00000374826 CORINQ9Y5Q5 1042 aa7.42□□□□□ -1.22
PMS1-202ENST00000374826 USP31Q70CQ4 1352 aa7.42□□□□□ -1.22
PMS1-202ENST00000374826 RLBP1P12271 317 aa7.41□□□□□ -1.22
PMS1-202ENST00000374826 ZNF605Q86T29 641 aa7.41□□□□□ -1.22
PMS1-202ENST00000374826 NOC4LQ9BVI4 516 aaKnown RBP7.41□□□□□ -1.22
PMS1-202ENST00000374826 ZNF552Q9H707 407 aaPredicted RBP7.41□□□□□ -1.22
PMS1-202ENST00000374826 VTI1BQ9UEU0 232 aa7.41□□□□□ -1.22
PMS1-202ENST00000374826 TLR6Q9Y2C9 796 aa7.41□□□□□ -1.22
PMS1-202ENST00000374826 IFT140Q96RY7 1462 aa7.41□□□□□ -1.22
PMS1-202ENST00000374826 PLCG1P19174 1290 aa7.4□□□□□ -1.22
PMS1-202ENST00000374826 LTKP29376 864 aa7.4□□□□□ -1.22
PMS1-202ENST00000374826 ITGAEP38570 1179 aa7.4□□□□□ -1.22
PMS1-202ENST00000374826 SNX17Q15036 470 aa7.4□□□□□ -1.22
PMS1-202ENST00000374826 TMEM201Q5SNT2 666 aa7.4□□□□□ -1.22
PMS1-202ENST00000374826 RNF141Q8WVD5 230 aa7.4□□□□□ -1.22
PMS1-202ENST00000374826 SYTL4Q96C24 671 aaPredicted RBP7.4□□□□□ -1.22
PMS1-202ENST00000374826 INTS4Q96HW7 963 aaKnown RBP7.4□□□□□ -1.22
PMS1-202ENST00000374826 KRTAP9-3Q9BYQ3 159 aa7.4□□□□□ -1.22
PMS1-202ENST00000374826 WRNQ14191 1432 aaPredicted RBP eCLIP7.4□□□□□ -1.22
PMS1-202ENST00000374826 RAD54L2Q9Y4B4 1467 aa7.4□□□□□ -1.22
PMS1-202ENST00000374826 ZNF608Q9ULD9 1512 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms