RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 FANCLQ9NW38 375 aa18.28■□□□□ 0.52
CNKSR1-202ENST00000374253 TRMT1Q9NXH9 659 aaKnown RBP18.28■□□□□ 0.52
CNKSR1-202ENST00000374253 POLRMTO00411 1230 aaKnown RBP18.28■□□□□ 0.52
CNKSR1-202ENST00000374253 MCM7P33993 719 aa18.28■□□□□ 0.52
CNKSR1-202ENST00000374253 GSTO1P78417 241 aa18.28■□□□□ 0.52
CNKSR1-202ENST00000374253 TTC38Q5R3I4 469 aa18.28■□□□□ 0.52
CNKSR1-202ENST00000374253 CERKQ8TCT0 537 aa18.28■□□□□ 0.52
CNKSR1-202ENST00000374253 SYMPKQ92797 1274 aaKnown RBP18.28■□□□□ 0.52
CNKSR1-202ENST00000374253 TNFRSF25Q93038 417 aa18.28■□□□□ 0.52
CNKSR1-202ENST00000374253 MAST2Q6P0Q8 1798 aa18.28■□□□□ 0.52
CNKSR1-202ENST00000374253 SMTNL1A8MU46 457 aa18.27■□□□□ 0.52
CNKSR1-202ENST00000374253 TERF1P54274 439 aa18.27■□□□□ 0.52
CNKSR1-202ENST00000374253 PTGDRQ13258 359 aa18.27■□□□□ 0.52
CNKSR1-202ENST00000374253 SLC35G1Q2M3R5 365 aa18.27■□□□□ 0.52
CNKSR1-202ENST00000374253 TYW1BQ6NUM6 668 aa18.27■□□□□ 0.52
CNKSR1-202ENST00000374253 KRT27Q7Z3Y8 459 aa18.27■□□□□ 0.52
CNKSR1-202ENST00000374253 MXD3Q9BW11 206 aa18.27■□□□□ 0.52
CNKSR1-202ENST00000374253 DLEC1Q9Y238 1755 aa18.27■□□□□ 0.52
CNKSR1-202ENST00000374253 ACTN4O43707 911 aaKnown RBP18.27■□□□□ 0.52
CNKSR1-202ENST00000374253 ATP2B4P23634 1241 aa18.27■□□□□ 0.52
CNKSR1-202ENST00000374253 TPM4P67936 248 aa18.27■□□□□ 0.52
CNKSR1-202ENST00000374253 GTF2IP78347 998 aa18.27■□□□□ 0.52
CNKSR1-202ENST00000374253 MYL5Q02045 173 aa18.27■□□□□ 0.52
CNKSR1-202ENST00000374253 PFKFB3Q16875 520 aaPredicted RBP18.27■□□□□ 0.52
CNKSR1-202ENST00000374253 TPD52L1Q16890 204 aaPredicted RBP18.27■□□□□ 0.52
CNKSR1-202ENST00000374253 AMOTL1Q8IY63 956 aa18.27■□□□□ 0.52
CNKSR1-202ENST00000374253 FAM205AQ6ZU69 1335 aa18.26■□□□□ 0.51
CNKSR1-202ENST00000374253 SERPINC1P01008 464 aa18.26■□□□□ 0.51
CNKSR1-202ENST00000374253 CCZ1BP86790 482 aa18.26■□□□□ 0.51
CNKSR1-202ENST00000374253 CCZ1P86791 482 aaPredicted RBP18.26■□□□□ 0.51
CNKSR1-202ENST00000374253 FMR1Q06787 632 aaKnown RBP eCLIP18.26■□□□□ 0.51
CNKSR1-202ENST00000374253 GOLGA8FQ08AF8 430 aa18.26■□□□□ 0.51
CNKSR1-202ENST00000374253 GOLGA8DPQ0D2H9 430 aa18.26■□□□□ 0.51
CNKSR1-202ENST00000374253 ARID3AQ99856 593 aa18.26■□□□□ 0.51
CNKSR1-202ENST00000374253 RASA1P20936 1047 aa18.26■□□□□ 0.51
CNKSR1-202ENST00000374253 CDC25AP30304 524 aa18.26■□□□□ 0.51
CNKSR1-202ENST00000374253 PICALMQ13492 652 aa18.26■□□□□ 0.51
CNKSR1-202ENST00000374253 TXNRD1Q16881 649 aa18.26■□□□□ 0.51
CNKSR1-202ENST00000374253 LDHCP07864 332 aa18.25■□□□□ 0.51
CNKSR1-202ENST00000374253 KIF5BP33176 963 aa18.25■□□□□ 0.51
CNKSR1-202ENST00000374253 PPP4CP60510 307 aa18.25■□□□□ 0.51
CNKSR1-202ENST00000374253 MYRIPQ8NFW9 859 aa18.25■□□□□ 0.51
CNKSR1-202ENST00000374253 SMARCE1Q969G3 411 aa18.25■□□□□ 0.51
CNKSR1-202ENST00000374253 TMEM47Q9BQJ4 181 aa18.25■□□□□ 0.51
CNKSR1-202ENST00000374253 MAD2L2Q9UI95 211 aa18.25■□□□□ 0.51
CNKSR1-202ENST00000374253 TMEM232C9JQI7 657 aa18.25■□□□□ 0.51
CNKSR1-202ENST00000374253 CYTH3O43739 400 aa18.25■□□□□ 0.51
CNKSR1-202ENST00000374253 CFAP100Q494V2 611 aa18.25■□□□□ 0.51
CNKSR1-202ENST00000374253 ARMCX5Q6P1M9 558 aa18.25■□□□□ 0.51
CNKSR1-202ENST00000374253 ZNF579Q8NAF0 562 aaKnown RBP18.25■□□□□ 0.51
CNKSR1-202ENST00000374253 ZNF592Q92610 1267 aa18.25■□□□□ 0.51
CNKSR1-202ENST00000374253 FLT1P17948 1338 aa18.25■□□□□ 0.51
CNKSR1-202ENST00000374253 IKBKBO14920 756 aa18.24■□□□□ 0.51
CNKSR1-202ENST00000374253 IL1R1P14778 569 aa18.24■□□□□ 0.51
CNKSR1-202ENST00000374253 CDK8P49336 464 aa18.24■□□□□ 0.51
CNKSR1-202ENST00000374253 UBASH3AP57075 661 aa18.24■□□□□ 0.51
CNKSR1-202ENST00000374253 HEATR3Q7Z4Q2 680 aa18.24■□□□□ 0.51
CNKSR1-202ENST00000374253 DGKHQ86XP1 1220 aa18.24■□□□□ 0.51
CNKSR1-202ENST00000374253 SMYD4Q8IYR2 804 aaPredicted RBP18.24■□□□□ 0.51
CNKSR1-202ENST00000374253 RIOK3O14730 519 aaKnown RBP18.24■□□□□ 0.51
CNKSR1-202ENST00000374253 COBLO75128 1261 aa18.24■□□□□ 0.51
CNKSR1-202ENST00000374253 BBOX1O75936 387 aa18.24■□□□□ 0.51
CNKSR1-202ENST00000374253 EYA3Q99504 573 aa18.24■□□□□ 0.51
CNKSR1-202ENST00000374253 TNNT1P13805 278 aa18.23■□□□□ 0.51
CNKSR1-202ENST00000374253 IL17AQ16552 155 aa18.23■□□□□ 0.51
CNKSR1-202ENST00000374253 DOK7Q18PE1 504 aa18.23■□□□□ 0.51
CNKSR1-202ENST00000374253 KLHL10Q6JEL2 608 aa18.23■□□□□ 0.51
CNKSR1-202ENST00000374253 HOMER1Q86YM7 354 aa18.23■□□□□ 0.51
CNKSR1-202ENST00000374253 HOOK1Q9UJC3 728 aaKnown RBP18.23■□□□□ 0.51
CNKSR1-202ENST00000374253 GPR75-ASB3A0A0A6YYF3 556 aa18.23■□□□□ 0.51
CNKSR1-202ENST00000374253 PPEF1O14829 653 aaPredicted RBP18.23■□□□□ 0.51
CNKSR1-202ENST00000374253 RHBDL3P58872 404 aa18.23■□□□□ 0.51
CNKSR1-202ENST00000374253 SLC27A3Q5K4L6 730 aa18.23■□□□□ 0.51
CNKSR1-202ENST00000374253 CLEC10AQ8IUN9 316 aa18.23■□□□□ 0.51
CNKSR1-202ENST00000374253 VAT1LQ9HCJ6 419 aa18.23■□□□□ 0.51
CNKSR1-202ENST00000374253 SLURP2P0DP57 97 aa18.22■□□□□ 0.51
CNKSR1-202ENST00000374253 EIF6P56537 245 aaKnown RBP18.22■□□□□ 0.51
CNKSR1-202ENST00000374253 MSL1Q68DK7 614 aa18.22■□□□□ 0.51
CNKSR1-202ENST00000374253 WWC2Q6AWC2 1192 aa18.22■□□□□ 0.51
CNKSR1-202ENST00000374253 USP17L2Q6R6M4 530 aa18.22■□□□□ 0.51
CNKSR1-202ENST00000374253 C15orf52Q6ZUT6 534 aaKnown RBP18.22■□□□□ 0.51
CNKSR1-202ENST00000374253 PRIMPOLQ96LW4 560 aa18.22■□□□□ 0.51
CNKSR1-202ENST00000374253 MED15Q96RN5 788 aa18.22■□□□□ 0.51
CNKSR1-202ENST00000374253 BLZF1Q9H2G9 400 aa18.22■□□□□ 0.51
CNKSR1-202ENST00000374253 NAV1Q8NEY1 1877 aa18.22■□□□□ 0.51
CNKSR1-202ENST00000374253 STX17P56962 302 aa18.22■□□□□ 0.51
CNKSR1-202ENST00000374253 HSP90AA2PQ14568 343 aaPredicted RBP18.22■□□□□ 0.51
CNKSR1-202ENST00000374253 GRM4Q14833 912 aa18.22■□□□□ 0.51
CNKSR1-202ENST00000374253 BLIDQ8IZY5 108 aa18.22■□□□□ 0.51
CNKSR1-202ENST00000374253 NFE2L3Q9Y4A8 694 aa18.22■□□□□ 0.51
CNKSR1-202ENST00000374253 SARSP49591 514 aaKnown RBP18.21■□□□□ 0.51
CNKSR1-202ENST00000374253 SCNN1DP51172 638 aa18.21■□□□□ 0.51
CNKSR1-202ENST00000374253 MORC3Q14149 939 aa18.21■□□□□ 0.51
CNKSR1-202ENST00000374253 PAGE5Q96GU1 130 aa18.21■□□□□ 0.51
CNKSR1-202ENST00000374253 ATP2C1P98194 919 aaPredicted RBP18.21■□□□□ 0.51
CNKSR1-202ENST00000374253 CEP95Q96GE4 821 aa18.21■□□□□ 0.51
CNKSR1-202ENST00000374253 OSBPL5Q9H0X9 879 aaPredicted RBP18.21■□□□□ 0.51
CNKSR1-202ENST00000374253 SAMSN1Q9NSI8 373 aaKnown RBP18.21■□□□□ 0.51
CNKSR1-202ENST00000374253 DAGLAQ9Y4D2 1042 aa18.21■□□□□ 0.51
CNKSR1-202ENST00000374253 ROBO3Q96MS0 1386 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms