RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 ABCF2Q9UG63 623 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 KIF3AQ9Y496 699 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 BCORQ6W2J9 1755 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 COL1A1P02452 1464 aaPredicted RBP7.35□□□□□ -1.23
CHD6-202ENST00000373222 SKILP12757 684 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 TNNT1P13805 278 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 RAD51AP2Q09MP3 1159 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 NCAPHQ15003 741 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 ZNF827Q17R98 1081 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 USP49Q70CQ1 688 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 CEP57L1Q8IYX8 460 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 CNPY4Q8N129 248 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 MARCH10Q8NA82 808 aaPredicted RBP7.35□□□□□ -1.23
CHD6-202ENST00000373222 NLRP7Q8WX94 980 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 PRIMPOLQ96LW4 560 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 MAP3K14Q99558 947 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 ANO10Q9NW15 660 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 NIP7Q9Y221 180 aaKnown RBP eCLIP7.35□□□□□ -1.23
CHD6-202ENST00000373222 SLC4A4Q9Y6R1 1079 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 LRP5O75197 1615 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 CICQ96RK0 1608 aaPredicted RBP7.35□□□□□ -1.23
CHD6-202ENST00000373222 MINDY4BA8MYZ0 360 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 WNT7AO00755 349 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 CAMTA2O94983 1202 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 SMC2O95347 1197 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 SLC3A2P08195 630 aaKnown RBP7.35□□□□□ -1.23
CHD6-202ENST00000373222 BMP6P22004 513 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 GTF2F1P35269 517 aaKnown RBP eCLIP7.35□□□□□ -1.23
CHD6-202ENST00000373222 IL6STP40189 918 aaPredicted RBP7.35□□□□□ -1.23
CHD6-202ENST00000373222 TDO2P48775 406 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 TOB1P50616 345 aaPredicted RBP7.35□□□□□ -1.23
CHD6-202ENST00000373222 DYNLL1P63167 89 aaKnown RBP7.35□□□□□ -1.23
CHD6-202ENST00000373222 CHRNDQ07001 517 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 GNL2Q13823 731 aaKnown RBP7.35□□□□□ -1.23
CHD6-202ENST00000373222 TCEAL1Q15170 157 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 TPD52L1Q16890 204 aaPredicted RBP7.35□□□□□ -1.23
CHD6-202ENST00000373222 LONRF3Q496Y0 759 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 ZNF384Q8TF68 577 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 NUP133Q8WUM0 1156 aa7.35□□□□□ -1.23
CHD6-202ENST00000373222 ROBO1Q9Y6N7 1651 aa7.34□□□□□ -1.23
CHD6-202ENST00000373222 WNK3Q9BYP7 1800 aa7.34□□□□□ -1.23
CHD6-202ENST00000373222 A0A1W2PQ27 194 aa7.34□□□□□ -1.23
CHD6-202ENST00000373222 A0A1W2PQ64 194 aa7.34□□□□□ -1.23
CHD6-202ENST00000373222 A0A1W2PQD8 194 aa7.34□□□□□ -1.23
CHD6-202ENST00000373222 NUTM2BA6NNL0 878 aaPredicted RBP7.34□□□□□ -1.23
CHD6-202ENST00000373222 NUTM2EB1AL46 878 aaPredicted RBP7.34□□□□□ -1.23
CHD6-202ENST00000373222 ADAMTS3O15072 1205 aa7.34□□□□□ -1.23
CHD6-202ENST00000373222 CTAGE5O15320 804 aa7.34□□□□□ -1.23
CHD6-202ENST00000373222 DHX16O60231 1041 aaKnown RBP7.34□□□□□ -1.23
CHD6-202ENST00000373222 YEATS4O95619 227 aa7.34□□□□□ -1.23
CHD6-202ENST00000373222 CASP1P29466 404 aa7.34□□□□□ -1.23
CHD6-202ENST00000373222 IARSP41252 1262 aaKnown RBP7.34□□□□□ -1.23
CHD6-202ENST00000373222 PDE4BQ07343 736 aa7.34□□□□□ -1.23
CHD6-202ENST00000373222 SLC39A14Q15043 492 aa7.34□□□□□ -1.23
CHD6-202ENST00000373222 LRRFIP1Q32MZ4 808 aaKnown RBP7.34□□□□□ -1.23
CHD6-202ENST00000373222 EARS2Q5JPH6 523 aaKnown RBP7.34□□□□□ -1.23
CHD6-202ENST00000373222 FAM182BQ5T319 152 aa7.34□□□□□ -1.23
CHD6-202ENST00000373222 ARMCX5Q6P1M9 558 aa7.34□□□□□ -1.23
CHD6-202ENST00000373222 SARM1Q6SZW1 724 aa7.34□□□□□ -1.23
CHD6-202ENST00000373222 TMC6Q7Z403 805 aa7.34□□□□□ -1.23
CHD6-202ENST00000373222 METTL16Q86W50 562 aaKnown RBP7.34□□□□□ -1.23
CHD6-202ENST00000373222 NUTM2AQ8IVF1 878 aaPredicted RBP7.34□□□□□ -1.23
CHD6-202ENST00000373222 PDILTQ8N807 584 aa7.34□□□□□ -1.23
CHD6-202ENST00000373222 KCNG4Q8TDN1 519 aa7.34□□□□□ -1.23
CHD6-202ENST00000373222 MRFAP1L1Q96HT8 127 aa7.34□□□□□ -1.23
CHD6-202ENST00000373222 GJD4Q96KN9 370 aaPredicted RBP7.34□□□□□ -1.23
CHD6-202ENST00000373222 CCDC87Q9NVE4 849 aa7.34□□□□□ -1.23
CHD6-202ENST00000373222 GABBR1Q9UBS5 961 aa7.34□□□□□ -1.23
CHD6-202ENST00000373222 PCDHGA4Q9Y5G9 962 aa7.34□□□□□ -1.23
CHD6-202ENST00000373222 ABCC12Q96J65 1359 aa7.34□□□□□ -1.23
CHD6-202ENST00000373222 LOC102724428A0A0B4J2F2 783 aa7.34□□□□□ -1.24
CHD6-202ENST00000373222 TMEM232C9JQI7 657 aa7.34□□□□□ -1.24
CHD6-202ENST00000373222 NMT2O60551 498 aa7.34□□□□□ -1.24
CHD6-202ENST00000373222 NTSR2O95665 410 aa7.34□□□□□ -1.24
CHD6-202ENST00000373222 SLC5A1P13866 664 aa7.34□□□□□ -1.24
CHD6-202ENST00000373222 U2AF2P26368 475 aaKnown RBP eCLIP7.34□□□□□ -1.243e-6■■□□□ 13.6
CHD6-202ENST00000373222 SYKP43405 635 aa7.34□□□□□ -1.24
CHD6-202ENST00000373222 SIK1P57059 783 aa7.34□□□□□ -1.24
CHD6-202ENST00000373222 CBX1P83916 185 aa7.34□□□□□ -1.24
CHD6-202ENST00000373222 NCBP1Q09161 790 aaKnown RBP7.34□□□□□ -1.24
CHD6-202ENST00000373222 TTF1Q15361 905 aaPredicted RBP7.34□□□□□ -1.24
CHD6-202ENST00000373222 AKNAD1Q5T1N1 836 aa7.34□□□□□ -1.24
CHD6-202ENST00000373222 BRAPQ7Z569 592 aa7.34□□□□□ -1.24
CHD6-202ENST00000373222 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.34□□□□□ -1.24
CHD6-202ENST00000373222 LRRN4CLQ8ND94 238 aa7.34□□□□□ -1.24
CHD6-202ENST00000373222 ZNF512BQ96KM6 892 aaPredicted RBP7.34□□□□□ -1.24
CHD6-202ENST00000373222 LRP2BPQ9P2M1 347 aa7.34□□□□□ -1.24
CHD6-202ENST00000373222 MAGEC2Q9UBF1 373 aaPredicted RBP7.34□□□□□ -1.24
CHD6-202ENST00000373222 PCDHB6Q9Y5E3 794 aa7.34□□□□□ -1.24
CHD6-202ENST00000373222 SLC12A7Q9Y666 1083 aa7.34□□□□□ -1.24
CHD6-202ENST00000373222 A0A1B0GUL6 1792 aa7.33□□□□□ -1.24
CHD6-202ENST00000373222 CACNA1SQ13698 1873 aa7.33□□□□□ -1.24
CHD6-202ENST00000373222 NPHP1O15259 732 aa7.33□□□□□ -1.24
CHD6-202ENST00000373222 VEGFAP15692 232 aaPredicted RBP7.33□□□□□ -1.24
CHD6-202ENST00000373222 CMA1P23946 247 aa7.33□□□□□ -1.24
CHD6-202ENST00000373222 SCNN1AP37088 669 aa7.33□□□□□ -1.24
CHD6-202ENST00000373222 MAP3K12Q12852 859 aa7.33□□□□□ -1.24
CHD6-202ENST00000373222 ERFEQ4G0M1 354 aa7.33□□□□□ -1.24
CHD6-202ENST00000373222 PPP4R3BQ5MIZ7 849 aa7.33□□□□□ -1.24
CHD6-202ENST00000373222 DMRTA1Q5VZB9 504 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms