RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 NT5DC1Q5TFE4 455 aa21.41■■□□□ 1.02
USP49-202ENST00000373010 PIK3AP1Q6ZUJ8 805 aa21.41■■□□□ 1.02
USP49-202ENST00000373010 STAG2Q8N3U4 1231 aa21.41■■□□□ 1.02
USP49-202ENST00000373010 NOL10Q9BSC4 688 aaKnown RBP21.41■■□□□ 1.02
USP49-202ENST00000373010 SERPINC1P01008 464 aa21.4■■□□□ 1.02
USP49-202ENST00000373010 KIF5BP33176 963 aa21.4■■□□□ 1.02
USP49-202ENST00000373010 UBASH3AP57075 661 aa21.4■■□□□ 1.02
USP49-202ENST00000373010 DGKHQ86XP1 1220 aa21.4■■□□□ 1.02
USP49-202ENST00000373010 SYMPKQ92797 1274 aaKnown RBP21.4■■□□□ 1.02
USP49-202ENST00000373010 RTFDC1Q9BY42 306 aaPredicted RBP21.4■■□□□ 1.02
USP49-202ENST00000373010 MORC2Q9Y6X9 1032 aaPredicted RBP21.4■■□□□ 1.02
USP49-202ENST00000373010 EP400Q96L91 3159 aa21.4■■□□□ 1.02
USP49-202ENST00000373010 MORC3Q14149 939 aa21.4■■□□□ 1.02
USP49-202ENST00000373010 HSP90AA4PQ58FG1 418 aa21.4■■□□□ 1.02
USP49-202ENST00000373010 TRMT1Q9NXH9 659 aaKnown RBP21.4■■□□□ 1.02
USP49-202ENST00000373010 GGA1Q9UJY5 639 aa21.4■■□□□ 1.02
USP49-202ENST00000373010 MTMR7Q9Y216 660 aa21.4■■□□□ 1.02
USP49-202ENST00000373010 ROBO3Q96MS0 1386 aa21.4■■□□□ 1.02
USP49-202ENST00000373010 CDK5RAP2Q96SN8 1893 aa21.39■■□□□ 1.02
USP49-202ENST00000373010 LDHCP07864 332 aa21.39■■□□□ 1.02
USP49-202ENST00000373010 FMR1Q06787 632 aaKnown RBP eCLIP21.39■■□□□ 1.02
USP49-202ENST00000373010 PTGDRQ13258 359 aa21.39■■□□□ 1.02
USP49-202ENST00000373010 PTPN21Q16825 1174 aa21.39■■□□□ 1.02
USP49-202ENST00000373010 GPKOWQ92917 476 aaPredicted RBP eCLIP21.39■■□□□ 1.02
USP49-202ENST00000373010 RBM17Q96I25 401 aaKnown RBP21.39■■□□□ 1.02
USP49-202ENST00000373010 TSPY3P0CV98 308 aa21.39■■□□□ 1.01
USP49-202ENST00000373010 TSPY8P0CW00 308 aa21.39■■□□□ 1.01
USP49-202ENST00000373010 ATP2B4P23634 1241 aa21.39■■□□□ 1.01
USP49-202ENST00000373010 BTDP43251 543 aa21.39■■□□□ 1.01
USP49-202ENST00000373010 FERMT2Q96AC1 680 aa21.39■■□□□ 1.01
USP49-202ENST00000373010 VWA3AA6NCI4 1184 aa21.38■■□□□ 1.01
USP49-202ENST00000373010 AFMP43652 599 aa21.38■■□□□ 1.01
USP49-202ENST00000373010 CFAP100Q494V2 611 aa21.38■■□□□ 1.01
USP49-202ENST00000373010 KANK3Q6NY19 840 aa21.38■■□□□ 1.01
USP49-202ENST00000373010 AMOTL1Q8IY63 956 aa21.38■■□□□ 1.01
USP49-202ENST00000373010 CCDC150Q8NCX0 1101 aa21.38■■□□□ 1.01
USP49-202ENST00000373010 BMP15O95972 392 aa21.38■■□□□ 1.01
USP49-202ENST00000373010 CASP1P29466 404 aa21.38■■□□□ 1.01
USP49-202ENST00000373010 TRMT44Q8IYL2 757 aaKnown RBP21.38■■□□□ 1.01
USP49-202ENST00000373010 ZNF444Q8N0Y2 327 aaPredicted RBP21.38■■□□□ 1.01
USP49-202ENST00000373010 ANKS1AQ92625 1134 aa21.38■■□□□ 1.01
USP49-202ENST00000373010 TRPC5Q9UL62 973 aaPredicted RBP21.38■■□□□ 1.01
USP49-202ENST00000373010 TMEM232C9JQI7 657 aa21.37■■□□□ 1.01
USP49-202ENST00000373010 SFPQP23246 707 aaKnown RBP eCLIP21.37■■□□□ 1.01
USP49-202ENST00000373010 ATP2C1P98194 919 aaPredicted RBP21.37■■□□□ 1.01
USP49-202ENST00000373010 DDR1Q08345 913 aa21.37■■□□□ 1.01
USP49-202ENST00000373010 CCAR2Q8N163 923 aaKnown RBP21.37■■□□□ 1.01
USP49-202ENST00000373010 MLKLQ8NB16 471 aa21.37■■□□□ 1.01
USP49-202ENST00000373010 POLLQ9UGP5 575 aa21.37■■□□□ 1.01
USP49-202ENST00000373010 IGSF3O75054 1194 aa21.37■■□□□ 1.01
USP49-202ENST00000373010 IL1R1P14778 569 aa21.37■■□□□ 1.01
USP49-202ENST00000373010 RASA1P20936 1047 aa21.37■■□□□ 1.01
USP49-202ENST00000373010 GRM4Q14833 912 aa21.37■■□□□ 1.01
USP49-202ENST00000373010 SLC35G1Q2M3R5 365 aa21.37■■□□□ 1.01
USP49-202ENST00000373010 MAD2L2Q9UI95 211 aa21.37■■□□□ 1.01
USP49-202ENST00000373010 CBFA2T2O43439 604 aa21.36■■□□□ 1.01
USP49-202ENST00000373010 MCM7P33993 719 aa21.36■■□□□ 1.01
USP49-202ENST00000373010 SPATA20Q8TB22 786 aa21.36■■□□□ 1.01
USP49-202ENST00000373010 PAGE5Q96GU1 130 aa21.36■■□□□ 1.01
USP49-202ENST00000373010 SLFN14P0C7P3 912 aa21.36■■□□□ 1.01
USP49-202ENST00000373010 ZNF592Q92610 1267 aa21.36■■□□□ 1.01
USP49-202ENST00000373010 MED15Q96RN5 788 aa21.36■■□□□ 1.01
USP49-202ENST00000373010 STX8Q9UNK0 236 aa21.36■■□□□ 1.01
USP49-202ENST00000373010 FAM205AQ6ZU69 1335 aa21.36■■□□□ 1.01
USP49-202ENST00000373010 HSPA1LP34931 641 aa21.35■■□□□ 1.01
USP49-202ENST00000373010 CEP135Q66GS9 1140 aa21.35■■□□□ 1.01
USP49-202ENST00000373010 TYW1BQ6NUM6 668 aa21.35■■□□□ 1.01
USP49-202ENST00000373010 TEX11Q8IYF3 940 aa21.35■■□□□ 1.01
USP49-202ENST00000373010 ZNF710Q8N1W2 664 aa21.35■■□□□ 1.01
USP49-202ENST00000373010 TRIML1Q8N9V2 468 aa21.35■■□□□ 1.01
USP49-202ENST00000373010 TBC1D16Q8TBP0 767 aa21.35■■□□□ 1.01
USP49-202ENST00000373010 RASGRP4Q8TDF6 673 aa21.35■■□□□ 1.01
USP49-202ENST00000373010 INTS13Q9NVM9 706 aa21.35■■□□□ 1.01
USP49-202ENST00000373010 NFE2L3Q9Y4A8 694 aa21.35■■□□□ 1.01
USP49-202ENST00000373010 GPR75-ASB3A0A0A6YYF3 556 aa21.35■■□□□ 1.01
USP49-202ENST00000373010 IL17AQ16552 155 aa21.35■■□□□ 1.01
USP49-202ENST00000373010 MFSD14BQ5SR56 506 aa21.35■■□□□ 1.01
USP49-202ENST00000373010 NYAP1Q6ZVC0 841 aa21.35■■□□□ 1.01
USP49-202ENST00000373010 RASGRP2Q7LDG7 609 aa21.35■■□□□ 1.01
USP49-202ENST00000373010 SH3RF1Q7Z6J0 888 aa21.35■■□□□ 1.01
USP49-202ENST00000373010 BLIDQ8IZY5 108 aa21.35■■□□□ 1.01
USP49-202ENST00000373010 TMEM47Q9BQJ4 181 aa21.35■■□□□ 1.01
USP49-202ENST00000373010 PDCL3Q9H2J4 239 aa21.35■■□□□ 1.01
USP49-202ENST00000373010 TCP11L1Q9NUJ3 509 aa21.35■■□□□ 1.01
USP49-202ENST00000373010 VSTM4Q8IW00 320 aa21.34■■□□□ 1.01
USP49-202ENST00000373010 DACH1Q9UI36 760 aa21.34■■□□□ 1.01
USP49-202ENST00000373010 C6orf229H3BNL8 230 aa21.34■■□□□ 1.01
USP49-202ENST00000373010 MYO1BO43795 1136 aa21.34■■□□□ 1.01
USP49-202ENST00000373010 BBOX1O75936 387 aa21.34■■□□□ 1.01
USP49-202ENST00000373010 TRIM37O94972 964 aa21.34■■□□□ 1.01
USP49-202ENST00000373010 CALML3P27482 149 aa21.34■■□□□ 1.01
USP49-202ENST00000373010 PTPN14Q15678 1187 aa21.34■■□□□ 1.01
USP49-202ENST00000373010 E4F1Q66K89 784 aaPredicted RBP21.34■■□□□ 1.01
USP49-202ENST00000373010 ENOX1Q8TC92 643 aaKnown RBP21.34■■□□□ 1.01
USP49-202ENST00000373010 STAMQ92783 540 aa21.34■■□□□ 1.01
USP49-202ENST00000373010 CYTH3O43739 400 aa21.33■■□□□ 1.01
USP49-202ENST00000373010 GOLGA8HP0CJ92 632 aa21.33■■□□□ 1.01
USP49-202ENST00000373010 TRAPPC10P48553 1259 aa21.33■■□□□ 1.01
USP49-202ENST00000373010 CDK8P49336 464 aa21.33■■□□□ 1.01
USP49-202ENST00000373010 GOLGA8FQ08AF8 430 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms