RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 ANKRD23Q86SG2 305 aa18.27■□□□□ 0.52
PRPF38B-202ENST00000370022 GMCL1P1Q8NEA9 526 aa18.27■□□□□ 0.52
PRPF38B-202ENST00000370022 ZIC5Q96T25 663 aa18.27■□□□□ 0.52
PRPF38B-202ENST00000370022 ZKSCAN3Q9BRR0 538 aa18.27■□□□□ 0.52
PRPF38B-202ENST00000370022 BACH2Q9BYV9 841 aa18.27■□□□□ 0.52
PRPF38B-202ENST00000370022 EMILIN3Q9NT22 766 aa18.27■□□□□ 0.52
PRPF38B-202ENST00000370022 AGTPBP1Q9UPW5 1226 aa18.27■□□□□ 0.52
PRPF38B-202ENST00000370022 SLC45A1Q9Y2W3 748 aa18.27■□□□□ 0.52
PRPF38B-202ENST00000370022 TNKSO95271 1327 aa18.27■□□□□ 0.51
PRPF38B-202ENST00000370022 ALDH1A1P00352 501 aa18.26■□□□□ 0.51
PRPF38B-202ENST00000370022 MAP2K1Q02750 393 aaPredicted RBP18.26■□□□□ 0.51
PRPF38B-202ENST00000370022 PABPC4Q13310 644 aaKnown RBP eCLIP18.26■□□□□ 0.51
PRPF38B-202ENST00000370022 RCSD1Q6JBY9 416 aa18.26■□□□□ 0.51
PRPF38B-202ENST00000370022 GADL1Q6ZQY3 521 aa18.26■□□□□ 0.51
PRPF38B-202ENST00000370022 DHX32Q7L7V1 743 aaKnown RBP18.26■□□□□ 0.51
PRPF38B-202ENST00000370022 IFNL1Q8IU54 200 aa18.26■□□□□ 0.51
PRPF38B-202ENST00000370022 IL17RAQ96F46 866 aa18.26■□□□□ 0.51
PRPF38B-202ENST00000370022 TMEM87BQ96K49 555 aa18.26■□□□□ 0.51
PRPF38B-202ENST00000370022 TM6SF1Q9BZW5 370 aa18.26■□□□□ 0.51
PRPF38B-202ENST00000370022 IFIT3O14879 490 aaKnown RBP18.25■□□□□ 0.51
PRPF38B-202ENST00000370022 PRC1O43663 620 aa18.25■□□□□ 0.51
PRPF38B-202ENST00000370022 ZYXQ15942 572 aaKnown RBP18.25■□□□□ 0.51
PRPF38B-202ENST00000370022 BLOC1S2Q6QNY1 142 aa18.25■□□□□ 0.51
PRPF38B-202ENST00000370022 ENAHQ8N8S7 591 aaPredicted RBP18.25■□□□□ 0.51
PRPF38B-202ENST00000370022 JAKMIP1Q96N16 626 aaKnown RBP18.25■□□□□ 0.51
PRPF38B-202ENST00000370022 TMEM47Q9BQJ4 181 aa18.25■□□□□ 0.51
PRPF38B-202ENST00000370022 PTPRFP10586 1907 aa18.25■□□□□ 0.51
PRPF38B-202ENST00000370022 LOC285556D6RIA3 1793 aa18.25■□□□□ 0.51
PRPF38B-202ENST00000370022 BTBD19C9JJ37 291 aa18.25■□□□□ 0.51
PRPF38B-202ENST00000370022 F5H6K3 240 aa18.25■□□□□ 0.51
PRPF38B-202ENST00000370022 ANTXR2P58335 489 aa18.25■□□□□ 0.51
PRPF38B-202ENST00000370022 KLRC3Q07444 240 aa18.25■□□□□ 0.51
PRPF38B-202ENST00000370022 SEC23AQ15436 765 aa18.25■□□□□ 0.51
PRPF38B-202ENST00000370022 IFIT1BQ5T764 474 aaKnown RBP18.25■□□□□ 0.51
PRPF38B-202ENST00000370022 LRRC47Q8N1G4 583 aaKnown RBP18.25■□□□□ 0.51
PRPF38B-202ENST00000370022 TMTC2Q8N394 836 aa18.25■□□□□ 0.51
PRPF38B-202ENST00000370022 PTPN18Q99952 460 aa18.25■□□□□ 0.51
PRPF38B-202ENST00000370022 IGF2BP3O00425 579 aaKnown RBP eCLIP18.24■□□□□ 0.51
PRPF38B-202ENST00000370022 VCAM1P19320 739 aa18.24■□□□□ 0.51
PRPF38B-202ENST00000370022 HOXA7P31268 230 aaPredicted RBP18.24■□□□□ 0.51
PRPF38B-202ENST00000370022 WTAPQ15007 396 aa18.24■□□□□ 0.51
PRPF38B-202ENST00000370022 TMEM67Q5HYA8 995 aa18.24■□□□□ 0.51
PRPF38B-202ENST00000370022 GPAT2Q6NUI2 795 aa18.24■□□□□ 0.51
PRPF38B-202ENST00000370022 CHST3Q7LGC8 479 aa18.24■□□□□ 0.51
PRPF38B-202ENST00000370022 JMYQ8N9B5 988 aa18.24■□□□□ 0.51
PRPF38B-202ENST00000370022 KAT14Q9H8E8 782 aa18.24■□□□□ 0.51
PRPF38B-202ENST00000370022 PNMA3Q9UL41 463 aa18.24■□□□□ 0.51
PRPF38B-202ENST00000370022 WDR46O15213 610 aaKnown RBP18.23■□□□□ 0.51
PRPF38B-202ENST00000370022 CASTP20810 708 aaKnown RBP18.23■□□□□ 0.51
PRPF38B-202ENST00000370022 EXOSC10Q01780 885 aaKnown RBP18.23■□□□□ 0.51
PRPF38B-202ENST00000370022 IGDCC4Q8TDY8 1250 aa18.23■□□□□ 0.51
PRPF38B-202ENST00000370022 GMCL1Q96IK5 515 aa18.23■□□□□ 0.51
PRPF38B-202ENST00000370022 C22orf23Q9BZE7 217 aa18.23■□□□□ 0.51
PRPF38B-202ENST00000370022 ZSWIM6Q9HCJ5 1215 aa18.23■□□□□ 0.51
PRPF38B-202ENST00000370022 PDHXO00330 501 aa18.22■□□□□ 0.51
PRPF38B-202ENST00000370022 NDUFB10O96000 172 aa18.22■□□□□ 0.51
PRPF38B-202ENST00000370022 LIFRP42702 1097 aa18.22■□□□□ 0.51
PRPF38B-202ENST00000370022 RBM25P49756 843 aaKnown RBP18.22■□□□□ 0.51
PRPF38B-202ENST00000370022 DGKZQ13574 1117 aa18.22■□□□□ 0.51
PRPF38B-202ENST00000370022 TREML2Q5T2D2 321 aa18.22■□□□□ 0.51
PRPF38B-202ENST00000370022 SLFN13Q68D06 897 aa18.22■□□□□ 0.51
PRPF38B-202ENST00000370022 RUFY3Q7L099 469 aa18.22■□□□□ 0.51
PRPF38B-202ENST00000370022 FAM43AQ8N2R8 423 aa18.22■□□□□ 0.51
PRPF38B-202ENST00000370022 BEGAINQ9BUH8 593 aa18.22■□□□□ 0.51
PRPF38B-202ENST00000370022 SAGE1Q9NXZ1 904 aa18.22■□□□□ 0.51
PRPF38B-202ENST00000370022 CYP46A1Q9Y6A2 500 aa18.22■□□□□ 0.51
PRPF38B-202ENST00000370022 USP17L15C9J2P7 530 aa18.21■□□□□ 0.51
PRPF38B-202ENST00000370022 USP17L13C9JLJ4 530 aa18.21■□□□□ 0.51
PRPF38B-202ENST00000370022 USP17L11C9JVI0 530 aa18.21■□□□□ 0.51
PRPF38B-202ENST00000370022 USP17L18D6R9N7 530 aa18.21■□□□□ 0.51
PRPF38B-202ENST00000370022 USP17L22D6RA61 530 aa18.21■□□□□ 0.51
PRPF38B-202ENST00000370022 USP17L17D6RBQ6 530 aa18.21■□□□□ 0.51
PRPF38B-202ENST00000370022 USP17L19D6RCP7 530 aa18.21■□□□□ 0.51
PRPF38B-202ENST00000370022 USP17L20D6RJB6 530 aa18.21■□□□□ 0.51
PRPF38B-202ENST00000370022 SH2B2O14492 632 aaPredicted RBP18.21■□□□□ 0.51
PRPF38B-202ENST00000370022 CA12O43570 354 aa18.21■□□□□ 0.51
PRPF38B-202ENST00000370022 RAD21O60216 631 aa18.21■□□□□ 0.51
PRPF38B-202ENST00000370022 OSBPP22059 807 aa18.21■□□□□ 0.51
PRPF38B-202ENST00000370022 RPS6KB1P23443 525 aa18.21■□□□□ 0.51
PRPF38B-202ENST00000370022 USP17L24Q0WX57 530 aa18.21■□□□□ 0.51
PRPF38B-202ENST00000370022 SPICE1Q8N0Z3 855 aa18.21■□□□□ 0.51
PRPF38B-202ENST00000370022 FBXL16Q8N461 479 aa18.21■□□□□ 0.51
PRPF38B-202ENST00000370022 PNMA1Q8ND90 353 aa18.21■□□□□ 0.51
PRPF38B-202ENST00000370022 MYH4Q9Y623 1939 aa18.21■□□□□ 0.51
PRPF38B-202ENST00000370022 PCNTO95613 3336 aa18.21■□□□□ 0.51
PRPF38B-202ENST00000370022 KIAA1755Q5JYT7 1200 aa18.21■□□□□ 0.51
PRPF38B-202ENST00000370022 DCAF4Q8WV16 495 aa18.21■□□□□ 0.51
PRPF38B-202ENST00000370022 PARK7Q99497 189 aaKnown RBP18.21■□□□□ 0.51
PRPF38B-202ENST00000370022 CFHR5Q9BXR6 569 aa18.21■□□□□ 0.51
PRPF38B-202ENST00000370022 RPAP3Q9H6T3 665 aaPredicted RBP18.21■□□□□ 0.51
PRPF38B-202ENST00000370022 LY9Q9HBG7 655 aa18.21■□□□□ 0.51
PRPF38B-202ENST00000370022 BMP3P12645 472 aa18.2■□□□□ 0.5
PRPF38B-202ENST00000370022 SLC1A4P43007 532 aa18.2■□□□□ 0.5
PRPF38B-202ENST00000370022 COL9A3Q14050 684 aaPredicted RBP18.2■□□□□ 0.5
PRPF38B-202ENST00000370022 CATSPERGQ6ZRH7 1159 aa18.2■□□□□ 0.5
PRPF38B-202ENST00000370022 WBP1LQ9NX94 342 aa18.2■□□□□ 0.5
PRPF38B-202ENST00000370022 SNHG28P0DPA3 235 aa18.19■□□□□ 0.5
PRPF38B-202ENST00000370022 IRX3P78415 501 aaPredicted RBP18.19■□□□□ 0.5
PRPF38B-202ENST00000370022 FGD1P98174 961 aa18.19■□□□□ 0.5
PRPF38B-202ENST00000370022 TAF1CQ15572 869 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms