RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 FGAP02671 866 aa17.66■□□□□ 0.42
COL17A1-202ENST00000369733 COPB1P53618 953 aaKnown RBP17.66■□□□□ 0.42
COL17A1-202ENST00000369733 LINC00301Q8NCQ3 95 aa17.66■□□□□ 0.42
COL17A1-202ENST00000369733 CABLES1Q8TDN4 633 aa17.66■□□□□ 0.42
COL17A1-202ENST00000369733 LPIN2Q92539 896 aa17.66■□□□□ 0.42
COL17A1-202ENST00000369733 IMPG2Q9BZV3 1241 aa17.66■□□□□ 0.42
COL17A1-202ENST00000369733 TBC1D7Q9P0N9 293 aa17.66■□□□□ 0.42
COL17A1-202ENST00000369733 CLASP1Q7Z460 1538 aa17.66■□□□□ 0.42
COL17A1-202ENST00000369733 MRPL12P52815 198 aaKnown RBP17.65■□□□□ 0.42
COL17A1-202ENST00000369733 RAB17Q9H0T7 212 aa17.65■□□□□ 0.42
COL17A1-202ENST00000369733 ZNF131P52739 623 aa17.65■□□□□ 0.42
COL17A1-202ENST00000369733 HERC4Q5GLZ8 1057 aaPredicted RBP17.65■□□□□ 0.42
COL17A1-202ENST00000369733 ZNF365Q70YC5 407 aa17.65■□□□□ 0.42
COL17A1-202ENST00000369733 VSTM4Q8IW00 320 aa17.65■□□□□ 0.42
COL17A1-202ENST00000369733 MRRFQ96E11 262 aaKnown RBP17.65■□□□□ 0.42
COL17A1-202ENST00000369733 CTTNBP2NLQ9P2B4 639 aa17.65■□□□□ 0.42
COL17A1-202ENST00000369733 ASIC3Q9UHC3 531 aa17.65■□□□□ 0.42
COL17A1-202ENST00000369733 RIPOR2Q9Y4F9 1068 aa17.65■□□□□ 0.42
COL17A1-202ENST00000369733 ADAMTS2O95450 1211 aa17.65■□□□□ 0.42
COL17A1-202ENST00000369733 UAP1Q16222 522 aaPredicted RBP17.65■□□□□ 0.42
COL17A1-202ENST00000369733 NELFCDQ8IXH7 590 aa17.65■□□□□ 0.42
COL17A1-202ENST00000369733 KCNK3O14649 394 aa17.65■□□□□ 0.42
COL17A1-202ENST00000369733 RGS16O15492 202 aaPredicted RBP17.65■□□□□ 0.42
COL17A1-202ENST00000369733 GTPBP6O43824 516 aaPredicted RBP17.65■□□□□ 0.42
COL17A1-202ENST00000369733 SARM1Q6SZW1 724 aa17.65■□□□□ 0.42
COL17A1-202ENST00000369733 ARHGEF2Q92974 986 aaKnown RBP17.65■□□□□ 0.42
COL17A1-202ENST00000369733 SAP30BPQ9UHR5 308 aaKnown RBP17.65■□□□□ 0.42
COL17A1-202ENST00000369733 HDAC9Q9UKV0 1011 aa17.65■□□□□ 0.42
COL17A1-202ENST00000369733 PCDH11XQ9BZA7 1347 aa17.64■□□□□ 0.42
COL17A1-202ENST00000369733 PCDH11YQ9BZA8 1340 aa17.64■□□□□ 0.42
COL17A1-202ENST00000369733 ERCC5P28715 1186 aaPredicted RBP17.64■□□□□ 0.41
COL17A1-202ENST00000369733 CLUL1Q15846 466 aa17.64■□□□□ 0.41
COL17A1-202ENST00000369733 LSM14BQ9BX40 385 aaKnown RBP17.64■□□□□ 0.41
COL17A1-202ENST00000369733 FEZ2Q9UHY8 353 aaPredicted RBP17.64■□□□□ 0.41
COL17A1-202ENST00000369733 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.64■□□□□ 0.41
COL17A1-202ENST00000369733 GKAP1Q5VSY0 366 aaPredicted RBP17.64■□□□□ 0.41
COL17A1-202ENST00000369733 KCTD16Q68DU8 428 aa17.64■□□□□ 0.41
COL17A1-202ENST00000369733 CSRNP2Q9H175 543 aa17.64■□□□□ 0.41
COL17A1-202ENST00000369733 STK38LQ9Y2H1 464 aa17.64■□□□□ 0.41
COL17A1-202ENST00000369733 BCORL1Q5H9F3 1711 aa17.64■□□□□ 0.41
COL17A1-202ENST00000369733 PDE8AO60658 829 aa17.64■□□□□ 0.41
COL17A1-202ENST00000369733 APBA1Q02410 837 aa17.64■□□□□ 0.41
COL17A1-202ENST00000369733 SYMPKQ92797 1274 aaKnown RBP17.64■□□□□ 0.41
COL17A1-202ENST00000369733 ZDHHC9Q9Y397 364 aa17.64■□□□□ 0.41
COL17A1-202ENST00000369733 ATP10AO60312 1499 aa17.64■□□□□ 0.41
COL17A1-202ENST00000369733 HAUS3Q68CZ6 603 aa17.64■□□□□ 0.41
COL17A1-202ENST00000369733 CCDC105Q8IYK2 499 aa17.64■□□□□ 0.41
COL17A1-202ENST00000369733 TACO1Q9BSH4 297 aaKnown RBP17.64■□□□□ 0.41
COL17A1-202ENST00000369733 A1BGP04217 495 aa17.63■□□□□ 0.41
COL17A1-202ENST00000369733 MGARPQ8TDB4 240 aa17.63■□□□□ 0.41
COL17A1-202ENST00000369733 MCUR1Q96AQ8 359 aa17.63■□□□□ 0.41
COL17A1-202ENST00000369733 GPCPD1Q9NPB8 672 aa17.63■□□□□ 0.41
COL17A1-202ENST00000369733 ZMYND10O75800 440 aa17.63■□□□□ 0.41
COL17A1-202ENST00000369733 RPN1P04843 607 aaKnown RBP17.63■□□□□ 0.41
COL17A1-202ENST00000369733 KRT5P13647 590 aa17.63■□□□□ 0.41
COL17A1-202ENST00000369733 ARID4AP29374 1257 aaPredicted RBP17.63■□□□□ 0.41
COL17A1-202ENST00000369733 SLC8A1P32418 973 aa17.63■□□□□ 0.41
COL17A1-202ENST00000369733 KIFAP3Q92845 792 aa17.63■□□□□ 0.41
COL17A1-202ENST00000369733 CEP170Q5SW79 1584 aa17.63■□□□□ 0.41
COL17A1-202ENST00000369733 A0A087WUV0 522 aaPredicted RBP17.63■□□□□ 0.41
COL17A1-202ENST00000369733 SOWAHDA6NJG2 315 aa17.63■□□□□ 0.41
COL17A1-202ENST00000369733 SNCBQ16143 134 aa17.63■□□□□ 0.41
COL17A1-202ENST00000369733 CALCRLQ16602 461 aa17.63■□□□□ 0.41
COL17A1-202ENST00000369733 APBB1IPQ7Z5R6 666 aaPredicted RBP17.63■□□□□ 0.41
COL17A1-202ENST00000369733 PPARAQ07869 468 aa17.63■□□□□ 0.41
COL17A1-202ENST00000369733 FANCBQ8NB91 859 aa17.63■□□□□ 0.41
COL17A1-202ENST00000369733 ZNF496Q96IT1 587 aaPredicted RBP17.63■□□□□ 0.41
COL17A1-202ENST00000369733 ANKRD2Q9GZV1 360 aa17.63■□□□□ 0.41
COL17A1-202ENST00000369733 C19orf44Q9H6X5 657 aa17.63■□□□□ 0.41
COL17A1-202ENST00000369733 KRIT1O00522 736 aa17.62■□□□□ 0.41
COL17A1-202ENST00000369733 RFC4P35249 363 aa17.62■□□□□ 0.41
COL17A1-202ENST00000369733 CADPS2Q86UW7 1296 aa17.62■□□□□ 0.41
COL17A1-202ENST00000369733 MICAL1Q8TDZ2 1067 aa17.62■□□□□ 0.41
COL17A1-202ENST00000369733 PLA2G4DQ86XP0 818 aa17.62■□□□□ 0.41
COL17A1-202ENST00000369733 ZNF219Q9P2Y4 722 aaPredicted RBP17.62■□□□□ 0.41
COL17A1-202ENST00000369733 COBLO75128 1261 aa17.62■□□□□ 0.41
COL17A1-202ENST00000369733 SLFNL1Q499Z3 407 aa17.62■□□□□ 0.41
COL17A1-202ENST00000369733 CERS3Q8IU89 383 aa17.62■□□□□ 0.41
COL17A1-202ENST00000369733 VCXQ9H320 206 aa17.62■□□□□ 0.41
COL17A1-202ENST00000369733 PPP1R1BQ9UD71 204 aaPredicted RBP17.62■□□□□ 0.41
COL17A1-202ENST00000369733 DBNLQ9UJU6 430 aaKnown RBP17.62■□□□□ 0.41
COL17A1-202ENST00000369733 GUCY2DQ02846 1103 aa17.62■□□□□ 0.41
COL17A1-202ENST00000369733 CCDC38Q502W7 563 aa17.62■□□□□ 0.41
COL17A1-202ENST00000369733 RNF10Q8N5U6 811 aaKnown RBP17.62■□□□□ 0.41
COL17A1-202ENST00000369733 AMFRQ9UKV5 643 aa17.62■□□□□ 0.41
COL17A1-202ENST00000369733 HHATQ5VTY9 493 aa17.61■□□□□ 0.41
COL17A1-202ENST00000369733 MAN1B1Q9UKM7 699 aa17.61■□□□□ 0.41
COL17A1-202ENST00000369733 GCKP35557 465 aa17.61■□□□□ 0.41
COL17A1-202ENST00000369733 KMT5BQ4FZB7 885 aa17.61■□□□□ 0.41
COL17A1-202ENST00000369733 ANKRD42Q8N9B4 389 aa17.61■□□□□ 0.41
COL17A1-202ENST00000369733 ACSBG1Q96GR2 724 aa17.61■□□□□ 0.41
COL17A1-202ENST00000369733 KIF23Q02241 960 aaPredicted RBP17.61■□□□□ 0.41
COL17A1-202ENST00000369733 NECTIN1Q15223 517 aa17.61■□□□□ 0.41
COL17A1-202ENST00000369733 IFNL3Q8IZI9 196 aa17.61■□□□□ 0.41
COL17A1-202ENST00000369733 ACRBPQ8NEB7 543 aa17.61■□□□□ 0.41
COL17A1-202ENST00000369733 GSDMAQ96QA5 445 aa17.61■□□□□ 0.41
COL17A1-202ENST00000369733 EFCC1Q9HA90 598 aa17.61■□□□□ 0.41
COL17A1-202ENST00000369733 PARP2Q9UGN5 583 aa17.61■□□□□ 0.41
COL17A1-202ENST00000369733 PI4K2BQ8TCG2 481 aa17.61■□□□□ 0.41
COL17A1-202ENST00000369733 AATKQ6ZMQ8 1374 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms