RNA–Protein interactions for RNA: ENST00000369459.6

BRCC3-203, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5 BASIC

Gene BRCC3, Length 2,641 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-203ENST00000369459 BICDL1Q6ZP65 573 aa8.57□□□□□ -1.04
BRCC3-203ENST00000369459 C15orf52Q6ZUT6 534 aaKnown RBP8.57□□□□□ -1.04
BRCC3-203ENST00000369459 GRAPLQ8TC17 118 aaPredicted RBP8.57□□□□□ -1.04
BRCC3-203ENST00000369459 PLEKHG4BQ96PX9 1271 aa8.57□□□□□ -1.04
BRCC3-203ENST00000369459 TBC1D2Q9BYX2 928 aa8.57□□□□□ -1.04
BRCC3-203ENST00000369459 CCDC8Q9H0W5 538 aaPredicted RBP8.57□□□□□ -1.04
BRCC3-203ENST00000369459 DEF6Q9H4E7 631 aa8.57□□□□□ -1.04
BRCC3-203ENST00000369459 KMT5AQ9NQR1 393 aa8.57□□□□□ -1.04
BRCC3-203ENST00000369459 CACNA1SQ13698 1873 aa8.56□□□□□ -1.04
BRCC3-203ENST00000369459 IFIT1P09914 478 aaKnown RBP8.56□□□□□ -1.04
BRCC3-203ENST00000369459 DDR1Q08345 913 aa8.56□□□□□ -1.04
BRCC3-203ENST00000369459 TRIM42Q8IWZ5 723 aa8.56□□□□□ -1.04
BRCC3-203ENST00000369459 CCDC102AQ96A19 550 aa8.56□□□□□ -1.04
BRCC3-203ENST00000369459 XAGE2Q96GT9 111 aa8.56□□□□□ -1.04
BRCC3-203ENST00000369459 SLC39A13Q96H72 371 aa8.56□□□□□ -1.04
BRCC3-203ENST00000369459 CDHR1Q96JP9 859 aa8.56□□□□□ -1.04
BRCC3-203ENST00000369459 DBNDD2Q9BQY9 259 aa8.56□□□□□ -1.04
BRCC3-203ENST00000369459 AS3MTQ9HBK9 375 aa8.56□□□□□ -1.04
BRCC3-203ENST00000369459 HDAC9Q9UKV0 1011 aa8.56□□□□□ -1.04
BRCC3-203ENST00000369459 PARP3Q9Y6F1 533 aa8.56□□□□□ -1.04
BRCC3-203ENST00000369459 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.56□□□□□ -1.04
BRCC3-203ENST00000369459 EN1Q05925 392 aaPredicted RBP8.56□□□□□ -1.04
BRCC3-203ENST00000369459 TTF1Q15361 905 aaPredicted RBP8.56□□□□□ -1.04
BRCC3-203ENST00000369459 CCDC144BQ3MJ40 725 aa8.56□□□□□ -1.04
BRCC3-203ENST00000369459 KCNN1Q92952 543 aa8.56□□□□□ -1.04
BRCC3-203ENST00000369459 RNF25Q96BH1 459 aaPredicted RBP8.56□□□□□ -1.04
BRCC3-203ENST00000369459 ESYT1Q9BSJ8 1104 aa8.56□□□□□ -1.04
BRCC3-203ENST00000369459 CWC15Q9P013 229 aaKnown RBP8.56□□□□□ -1.04
BRCC3-203ENST00000369459 ACAD8Q9UKU7 415 aa8.56□□□□□ -1.04
BRCC3-203ENST00000369459 MORC2Q9Y6X9 1032 aaPredicted RBP8.56□□□□□ -1.04
BRCC3-203ENST00000369459 LAMA4Q16363 1823 aa8.55□□□□□ -1.04
BRCC3-203ENST00000369459 MYO5AQ9Y4I1 1855 aaKnown RBP8.55□□□□□ -1.04
BRCC3-203ENST00000369459 ZFYP08048 801 aaPredicted RBP8.55□□□□□ -1.04
BRCC3-203ENST00000369459 PIK3CAP42336 1068 aa8.55□□□□□ -1.04
BRCC3-203ENST00000369459 RWDD2BP57060 319 aa8.55□□□□□ -1.04
BRCC3-203ENST00000369459 CHRNDQ07001 517 aa8.55□□□□□ -1.04
BRCC3-203ENST00000369459 DRAXINQ8NBI3 349 aaPredicted RBP8.55□□□□□ -1.04
BRCC3-203ENST00000369459 NELL1Q92832 810 aa8.55□□□□□ -1.04
BRCC3-203ENST00000369459 NAP1L4Q99733 375 aaKnown RBP8.55□□□□□ -1.04
BRCC3-203ENST00000369459 SEC31BQ9NQW1 1179 aa8.55□□□□□ -1.04
BRCC3-203ENST00000369459 TLR7Q9NYK1 1049 aaKnown RBP8.55□□□□□ -1.04
BRCC3-203ENST00000369459 LEMD3Q9Y2U8 911 aa8.55□□□□□ -1.04
BRCC3-203ENST00000369459 IKBKGQ9Y6K9 419 aa8.55□□□□□ -1.04
BRCC3-203ENST00000369459 FAM177BA6PVY3 158 aa8.55□□□□□ -1.04
BRCC3-203ENST00000369459 FMNL1O95466 1100 aaPredicted RBP8.55□□□□□ -1.04
BRCC3-203ENST00000369459 MAN1A1P33908 653 aa8.55□□□□□ -1.04
BRCC3-203ENST00000369459 GJA8P48165 433 aa8.55□□□□□ -1.04
BRCC3-203ENST00000369459 TRIM29Q14134 588 aa8.55□□□□□ -1.04
BRCC3-203ENST00000369459 ENOX2Q16206 610 aaKnown RBP8.55□□□□□ -1.04
BRCC3-203ENST00000369459 SLC5A9Q2M3M2 681 aa8.55□□□□□ -1.04
BRCC3-203ENST00000369459 TTC39AQ5SRH9 613 aa8.55□□□□□ -1.04
BRCC3-203ENST00000369459 PDXDC1Q6P996 788 aa8.55□□□□□ -1.04
BRCC3-203ENST00000369459 ARHGAP27Q6ZUM4 889 aa8.55□□□□□ -1.04
BRCC3-203ENST00000369459 NOP9Q86U38 636 aaKnown RBP8.55□□□□□ -1.04
BRCC3-203ENST00000369459 KBTBD3Q8NAB2 608 aa8.55□□□□□ -1.04
BRCC3-203ENST00000369459 FRS2Q8WU20 508 aa8.55□□□□□ -1.04
BRCC3-203ENST00000369459 RPGRQ92834 1020 aaKnown RBP8.55□□□□□ -1.04
BRCC3-203ENST00000369459 FAXDC2Q96IV6 333 aa8.55□□□□□ -1.04
BRCC3-203ENST00000369459 SLC39A3Q9BRY0 314 aa8.55□□□□□ -1.04
BRCC3-203ENST00000369459 ZNF804BA4D1E1 1349 aa8.55□□□□□ -1.04
BRCC3-203ENST00000369459 BRCA1P38398 1863 aaKnown RBP8.55□□□□□ -1.04
BRCC3-203ENST00000369459 PSME4Q14997 1843 aa8.54□□□□□ -1.04
BRCC3-203ENST00000369459 C10orf71Q711Q0 1435 aa8.54□□□□□ -1.04
BRCC3-203ENST00000369459 NPHP1O15259 732 aa8.54□□□□□ -1.04
BRCC3-203ENST00000369459 NPR1P16066 1061 aa8.54□□□□□ -1.04
BRCC3-203ENST00000369459 MAP2K2P36507 400 aa8.54□□□□□ -1.04
BRCC3-203ENST00000369459 RPS6KA3P51812 740 aa8.54□□□□□ -1.04
BRCC3-203ENST00000369459 PDCD2Q16342 344 aaPredicted RBP8.54□□□□□ -1.04
BRCC3-203ENST00000369459 IQCEQ6IPM2 695 aa8.54□□□□□ -1.04
BRCC3-203ENST00000369459 ZSCAN25Q6NSZ9 544 aa8.54□□□□□ -1.04
BRCC3-203ENST00000369459 CCBE1Q6UXH8 406 aaPredicted RBP8.54□□□□□ -1.04
BRCC3-203ENST00000369459 C3orf67Q6ZVT6 689 aa8.54□□□□□ -1.04
BRCC3-203ENST00000369459 HELQQ8TDG4 1101 aa8.54□□□□□ -1.04
BRCC3-203ENST00000369459 RILPL2Q969X0 211 aa8.54□□□□□ -1.04
BRCC3-203ENST00000369459 GBP4Q96PP9 640 aa8.54□□□□□ -1.04
BRCC3-203ENST00000369459 RPAP3Q9H6T3 665 aaPredicted RBP8.54□□□□□ -1.04
BRCC3-203ENST00000369459 SPATA7Q9P0W8 599 aa8.54□□□□□ -1.04
BRCC3-203ENST00000369459 MINPP1Q9UNW1 487 aa8.54□□□□□ -1.04
BRCC3-203ENST00000369459 SGSM2O43147 1006 aa8.54□□□□□ -1.04
BRCC3-203ENST00000369459 RNASEH2AO75792 299 aaKnown RBP8.54□□□□□ -1.04
BRCC3-203ENST00000369459 TIMM10P62072 90 aa8.54□□□□□ -1.04
BRCC3-203ENST00000369459 STYK1Q6J9G0 422 aa8.54□□□□□ -1.04
BRCC3-203ENST00000369459 USP26Q9BXU7 913 aa8.54□□□□□ -1.04
BRCC3-203ENST00000369459 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.54□□□□□ -1.04
BRCC3-203ENST00000369459 XPO4Q9C0E2 1151 aaKnown RBP8.54□□□□□ -1.04
BRCC3-203ENST00000369459 CASS4Q9NQ75 786 aa8.54□□□□□ -1.04
BRCC3-203ENST00000369459 HELLSQ9NRZ9 838 aa8.54□□□□□ -1.04
BRCC3-203ENST00000369459 PAG1Q9NWQ8 432 aa8.54□□□□□ -1.04
BRCC3-203ENST00000369459 TFIP11Q9UBB9 837 aaKnown RBP8.54□□□□□ -1.04
BRCC3-203ENST00000369459 TBK1Q9UHD2 729 aa8.54□□□□□ -1.04
BRCC3-203ENST00000369459 ZSCAN9O15535 394 aaPredicted RBP8.53□□□□□ -1.04
BRCC3-203ENST00000369459 SEC24BO95487 1268 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 CYP11B2P19099 503 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 TSPAN7P41732 249 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 PACS1Q6VY07 963 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 SMIM5Q71RC9 77 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 ZFPM2Q8WW38 1151 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 MAP3K14Q99558 947 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 CRACR2AQ9BSW2 395 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 TMEM165Q9HC07 324 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms