RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 TULP4Q9NRJ4 1543 aa10.98□□□□□ -0.65
SCAF11-202ENST00000369367 DDX39AO00148 427 aaKnown RBP10.98□□□□□ -0.65
SCAF11-202ENST00000369367 GSTA5Q7RTV2 222 aa10.98□□□□□ -0.65
SCAF11-202ENST00000369367 RETREG2Q8NC44 543 aa10.98□□□□□ -0.65
SCAF11-202ENST00000369367 PODXL2Q9NZ53 605 aa10.98□□□□□ -0.65
SCAF11-202ENST00000369367 LARSQ9P2J5 1176 aaKnown RBP10.98□□□□□ -0.65
SCAF11-202ENST00000369367 ERCC6L2Q5T890 1561 aa10.98□□□□□ -0.65
SCAF11-202ENST00000369367 NDC80O14777 642 aa10.98□□□□□ -0.65
SCAF11-202ENST00000369367 MYL5Q02045 173 aa10.98□□□□□ -0.65
SCAF11-202ENST00000369367 FAM47AQ5JRC9 791 aa10.98□□□□□ -0.65
SCAF11-202ENST00000369367 EXOC3O60645 756 aa10.98□□□□□ -0.65
SCAF11-202ENST00000369367 BLIDQ8IZY5 108 aa10.98□□□□□ -0.65
SCAF11-202ENST00000369367 MLKLQ8NB16 471 aa10.98□□□□□ -0.65
SCAF11-202ENST00000369367 NUCKS1Q9H1E3 243 aaKnown RBP10.98□□□□□ -0.65
SCAF11-202ENST00000369367 SNX14Q9Y5W7 946 aa10.98□□□□□ -0.65
SCAF11-202ENST00000369367 RAD17O75943 681 aa10.97□□□□□ -0.65
SCAF11-202ENST00000369367 COPB2P35606 906 aa10.97□□□□□ -0.65
SCAF11-202ENST00000369367 CCDC50Q8IVM0 306 aa10.97□□□□□ -0.65
SCAF11-202ENST00000369367 ABI1Q8IZP0 508 aa10.97□□□□□ -0.65
SCAF11-202ENST00000369367 PLCD3Q8N3E9 789 aa10.97□□□□□ -0.65
SCAF11-202ENST00000369367 FBXO40Q9UH90 709 aa10.97□□□□□ -0.65
SCAF11-202ENST00000369367 PTCH1Q13635 1447 aa10.97□□□□□ -0.65
SCAF11-202ENST00000369367 SHTN1A0MZ66 631 aa10.97□□□□□ -0.65
SCAF11-202ENST00000369367 GNG11P61952 73 aa10.97□□□□□ -0.65
SCAF11-202ENST00000369367 CLUL1Q15846 466 aa10.97□□□□□ -0.65
SCAF11-202ENST00000369367 GIMAP6Q6P9H5 292 aa10.97□□□□□ -0.65
SCAF11-202ENST00000369367 METTL13Q8N6R0 699 aa10.97□□□□□ -0.65
SCAF11-202ENST00000369367 SLC16A10Q8TF71 515 aa10.97□□□□□ -0.65
SCAF11-202ENST00000369367 KDM2BQ8NHM5 1336 aa10.97□□□□□ -0.65
SCAF11-202ENST00000369367 N4BP1O75113 896 aaKnown RBP10.97□□□□□ -0.65
SCAF11-202ENST00000369367 TNFAIP3P21580 790 aa10.97□□□□□ -0.65
SCAF11-202ENST00000369367 TXNRD1Q16881 649 aa10.97□□□□□ -0.65
SCAF11-202ENST00000369367 KRT40Q6A162 431 aa10.97□□□□□ -0.65
SCAF11-202ENST00000369367 NOC4LQ9BVI4 516 aaKnown RBP10.97□□□□□ -0.65
SCAF11-202ENST00000369367 CABP7Q86V35 215 aa10.97□□□□□ -0.65
SCAF11-202ENST00000369367 AOPEPQ8N6M6 819 aa10.97□□□□□ -0.65
SCAF11-202ENST00000369367 FANCBQ8NB91 859 aa10.97□□□□□ -0.65
SCAF11-202ENST00000369367 CCDC94Q9BW85 323 aaPredicted RBP10.97□□□□□ -0.65
SCAF11-202ENST00000369367 MRPL44Q9H9J2 332 aaKnown RBP10.97□□□□□ -0.65
SCAF11-202ENST00000369367 TNKSO95271 1327 aa10.97□□□□□ -0.65
SCAF11-202ENST00000369367 RIOK1Q9BRS2 568 aaKnown RBP10.97□□□□□ -0.65
SCAF11-202ENST00000369367 ZNF215Q9UL58 517 aaPredicted RBP10.97□□□□□ -0.65
SCAF11-202ENST00000369367 CLRN2A0PK11 232 aa10.97□□□□□ -0.65
SCAF11-202ENST00000369367 SYT1P21579 422 aa10.97□□□□□ -0.65
SCAF11-202ENST00000369367 CCDC84Q86UT8 332 aaPredicted RBP10.97□□□□□ -0.65
SCAF11-202ENST00000369367 STIM2Q9P246 746 aa10.97□□□□□ -0.65
SCAF11-202ENST00000369367 COL15A1P39059 1388 aa10.96□□□□□ -0.65
SCAF11-202ENST00000369367 GCFC2P16383 781 aaKnown RBP10.96□□□□□ -0.65
SCAF11-202ENST00000369367 RAPGEF1Q13905 1077 aa10.96□□□□□ -0.65
SCAF11-202ENST00000369367 NEK8Q86SG6 692 aa10.96□□□□□ -0.65
SCAF11-202ENST00000369367 EAF2Q96CJ1 260 aaPredicted RBP10.96□□□□□ -0.65
SCAF11-202ENST00000369367 PCDHA12Q9UN75 941 aa10.96□□□□□ -0.65
SCAF11-202ENST00000369367 PCDHA1Q9Y5I3 950 aa10.96□□□□□ -0.65
SCAF11-202ENST00000369367 SLU7O95391 586 aaKnown RBP10.96□□□□□ -0.65
SCAF11-202ENST00000369367 PHKA1P46020 1223 aa10.96□□□□□ -0.65
SCAF11-202ENST00000369367 LRRC24Q50LG9 513 aa10.96□□□□□ -0.65
SCAF11-202ENST00000369367 AGLP35573 1532 aa10.96□□□□□ -0.65
SCAF11-202ENST00000369367 FAM182BQ5T319 152 aa10.96□□□□□ -0.65
SCAF11-202ENST00000369367 TPH2Q8IWU9 490 aa10.96□□□□□ -0.65
SCAF11-202ENST00000369367 PAXBP1Q9Y5B6 917 aa10.96□□□□□ -0.65
SCAF11-202ENST00000369367 LAD1O00515 517 aa10.96□□□□□ -0.66
SCAF11-202ENST00000369367 SCG2P13521 617 aa10.96□□□□□ -0.66
SCAF11-202ENST00000369367 HSPA4P34932 840 aa10.96□□□□□ -0.66
SCAF11-202ENST00000369367 PLA2G4DQ86XP0 818 aa10.96□□□□□ -0.66
SCAF11-202ENST00000369367 GCNT3O95395 438 aa10.96□□□□□ -0.66
SCAF11-202ENST00000369367 TNNC2P02585 160 aa10.96□□□□□ -0.66
SCAF11-202ENST00000369367 TUBBP07437 444 aa10.96□□□□□ -0.66
SCAF11-202ENST00000369367 BMP3P12645 472 aa10.96□□□□□ -0.66
SCAF11-202ENST00000369367 HOXA7P31268 230 aaPredicted RBP10.96□□□□□ -0.66
SCAF11-202ENST00000369367 TBC1D8BQ0IIM8 1120 aa10.96□□□□□ -0.66
SCAF11-202ENST00000369367 SEL1L2Q5TEA6 688 aa10.96□□□□□ -0.66
SCAF11-202ENST00000369367 CEP112Q8N8E3 955 aa10.96□□□□□ -0.66
SCAF11-202ENST00000369367 ZNF830Q96NB3 372 aaPredicted RBP10.96□□□□□ -0.66
SCAF11-202ENST00000369367 WDR11Q9BZH6 1224 aa10.96□□□□□ -0.66
SCAF11-202ENST00000369367 MAGEF1Q9HAY2 307 aa10.96□□□□□ -0.66
SCAF11-202ENST00000369367 RC3H1Q5TC82 1133 aaKnown RBP10.96□□□□□ -0.66
SCAF11-202ENST00000369367 RPS6KC1Q96S38 1066 aa10.96□□□□□ -0.66
SCAF11-202ENST00000369367 PLIN2Q99541 437 aa10.96□□□□□ -0.66
SCAF11-202ENST00000369367 TNNQ9UQP3 1299 aa10.96□□□□□ -0.66
SCAF11-202ENST00000369367 DAPK3O43293 454 aa10.95□□□□□ -0.66
SCAF11-202ENST00000369367 KIF11P52732 1056 aa10.95□□□□□ -0.66
SCAF11-202ENST00000369367 ARID5AQ03989 594 aa10.95□□□□□ -0.66
SCAF11-202ENST00000369367 BRIP1Q9BX63 1249 aa10.95□□□□□ -0.66
SCAF11-202ENST00000369367 SRRTQ9BXP5 876 aaKnown RBP10.95□□□□□ -0.66
SCAF11-202ENST00000369367 CGNQ9P2M7 1197 aaKnown RBP10.95□□□□□ -0.66
SCAF11-202ENST00000369367 FAM169AQ9Y6X4 670 aa10.95□□□□□ -0.66
SCAF11-202ENST00000369367 TYRO3Q06418 890 aa10.95□□□□□ -0.66
SCAF11-202ENST00000369367 CSGALNACT2Q8N6G5 542 aa10.95□□□□□ -0.66
SCAF11-202ENST00000369367 IPO4Q8TEX9 1081 aaKnown RBP10.95□□□□□ -0.66
SCAF11-202ENST00000369367 PPM1EQ8WY54 764 aa10.95□□□□□ -0.66
SCAF11-202ENST00000369367 ZNF341Q9BYN7 854 aa10.95□□□□□ -0.66
SCAF11-202ENST00000369367 STAT2P52630 851 aa10.95□□□□□ -0.66
SCAF11-202ENST00000369367 LRRC47Q8N1G4 583 aaKnown RBP10.95□□□□□ -0.66
SCAF11-202ENST00000369367 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.95□□□□□ -0.66
SCAF11-202ENST00000369367 SOS2Q07890 1332 aaPredicted RBP10.95□□□□□ -0.66
SCAF11-202ENST00000369367 LAMC1P11047 1609 aa10.95□□□□□ -0.66
SCAF11-202ENST00000369367 RNF17Q9BXT8 1623 aaKnown RBP10.95□□□□□ -0.66
SCAF11-202ENST00000369367 HSPD1P10809 573 aaKnown RBP10.95□□□□□ -0.66
SCAF11-202ENST00000369367 PLEKHF1Q96S99 279 aa10.95□□□□□ -0.66
SCAF11-202ENST00000369367 ZMYM6O95789 1325 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms