RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 SGO2Q562F6 1265 aa6.79□□□□□ -1.32
ECHDC1-204ENST00000368292 PRSS36Q5K4E3 855 aa6.79□□□□□ -1.32
ECHDC1-204ENST00000368292 ANKRD13AQ8IZ07 590 aa6.79□□□□□ -1.32
ECHDC1-204ENST00000368292 GPBAR1Q8TDU6 330 aa6.79□□□□□ -1.32
ECHDC1-204ENST00000368292 CAMKK2Q96RR4 588 aa6.79□□□□□ -1.32
ECHDC1-204ENST00000368292 CBX8Q9HC52 389 aa6.79□□□□□ -1.32
ECHDC1-204ENST00000368292 HIF3AQ9Y2N7 669 aa6.79□□□□□ -1.32
ECHDC1-204ENST00000368292 CCDC18Q5T9S5 1454 aa6.79□□□□□ -1.32
ECHDC1-204ENST00000368292 XRN1Q8IZH2 1706 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-204ENST00000368292 HMX2A2RU54 273 aa6.78□□□□□ -1.32
ECHDC1-204ENST00000368292 TMPRSS2O15393 492 aa6.78□□□□□ -1.32
ECHDC1-204ENST00000368292 MAFGO15525 162 aa6.78□□□□□ -1.32
ECHDC1-204ENST00000368292 KCNQ2O43526 872 aa6.78□□□□□ -1.32
ECHDC1-204ENST00000368292 GAS2O43903 313 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-204ENST00000368292 CENPBP07199 599 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-204ENST00000368292 IDI1Q13907 227 aa6.78□□□□□ -1.32
ECHDC1-204ENST00000368292 CCDC85BQ15834 202 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-204ENST00000368292 CLEC10AQ8IUN9 316 aa6.78□□□□□ -1.32
ECHDC1-204ENST00000368292 UNC5CLQ8IV45 518 aa6.78□□□□□ -1.32
ECHDC1-204ENST00000368292 TRIM42Q8IWZ5 723 aa6.78□□□□□ -1.32
ECHDC1-204ENST00000368292 FAM83CQ9BQN1 747 aa6.78□□□□□ -1.32
ECHDC1-204ENST00000368292 TGIF2Q9GZN2 237 aa6.78□□□□□ -1.32
ECHDC1-204ENST00000368292 C7orf69Q9H7B7 122 aa6.78□□□□□ -1.32
ECHDC1-204ENST00000368292 SPON1Q9HCB6 807 aa6.78□□□□□ -1.32
ECHDC1-204ENST00000368292 FAM105AQ9NUU6 356 aa6.78□□□□□ -1.32
ECHDC1-204ENST00000368292 CRIM1Q9NZV1 1036 aa6.78□□□□□ -1.32
ECHDC1-204ENST00000368292 STOML1Q9UBI4 398 aa6.78□□□□□ -1.32
ECHDC1-204ENST00000368292 CYP8B1Q9UNU6 501 aa6.78□□□□□ -1.32
ECHDC1-204ENST00000368292 SAMM50Q9Y512 469 aa6.78□□□□□ -1.32
ECHDC1-204ENST00000368292 CCDC141Q6ZP82 1450 aa6.78□□□□□ -1.32
ECHDC1-204ENST00000368292 TRIM37O94972 964 aa6.77□□□□□ -1.33
ECHDC1-204ENST00000368292 MAP4P27816 1152 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-204ENST00000368292 ANAPC15P60006 121 aa6.77□□□□□ -1.33
ECHDC1-204ENST00000368292 PTPN11Q06124 597 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-204ENST00000368292 TTBK2Q6IQ55 1244 aa6.77□□□□□ -1.33
ECHDC1-204ENST00000368292 LLGL2Q6P1M3 1020 aa6.77□□□□□ -1.33
ECHDC1-204ENST00000368292 BEND4Q6ZU67 534 aa6.77□□□□□ -1.33
ECHDC1-204ENST00000368292 DYMQ7RTS9 669 aa6.77□□□□□ -1.33
ECHDC1-204ENST00000368292 EXOC8Q8IYI6 725 aa6.77□□□□□ -1.33
ECHDC1-204ENST00000368292 FBLIM1Q8WUP2 373 aa6.77□□□□□ -1.33
ECHDC1-204ENST00000368292 EZH1Q92800 747 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-204ENST00000368292 NOC4LQ9BVI4 516 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-204ENST00000368292 DISC1Q9NRI5 854 aa6.77□□□□□ -1.33
ECHDC1-204ENST00000368292 SLFN14P0C7P3 912 aa6.76□□□□□ -1.33
ECHDC1-204ENST00000368292 HSPA6P17066 643 aa6.76□□□□□ -1.33
ECHDC1-204ENST00000368292 FSTP19883 344 aa6.76□□□□□ -1.33
ECHDC1-204ENST00000368292 USP11P51784 963 aa6.76□□□□□ -1.33
ECHDC1-204ENST00000368292 ID3Q02535 119 aa6.76□□□□□ -1.33
ECHDC1-204ENST00000368292 LRRC14Q15048 493 aa6.76□□□□□ -1.33
ECHDC1-204ENST00000368292 ZC3H12AQ5D1E8 599 aaKnown RBP6.76□□□□□ -1.33
ECHDC1-204ENST00000368292 SCARA3Q6AZY7 606 aa6.76□□□□□ -1.33
ECHDC1-204ENST00000368292 SREK1Q8WXA9 508 aaKnown RBP6.76□□□□□ -1.33
ECHDC1-204ENST00000368292 FANCD2OSQ96PS1 177 aa6.76□□□□□ -1.33
ECHDC1-204ENST00000368292 TINF2Q9BSI4 451 aa6.76□□□□□ -1.33
ECHDC1-204ENST00000368292 KCNF1Q9H3M0 494 aa6.76□□□□□ -1.33
ECHDC1-204ENST00000368292 ACBD3Q9H3P7 528 aa6.76□□□□□ -1.33
ECHDC1-204ENST00000368292 ACSS3Q9H6R3 686 aa6.76□□□□□ -1.33
ECHDC1-204ENST00000368292 PRDM10Q9NQV6 1147 aa6.76□□□□□ -1.33
ECHDC1-204ENST00000368292 AP4E1Q9UPM8 1137 aa6.76□□□□□ -1.33
ECHDC1-204ENST00000368292 TBX22Q9Y458 520 aa6.76□□□□□ -1.33
ECHDC1-204ENST00000368292 C1orf167Q5SNV9 1468 aa6.76□□□□□ -1.33
ECHDC1-204ENST00000368292 PLCH1Q4KWH8 1693 aa6.76□□□□□ -1.33
ECHDC1-204ENST00000368292 TMEM131LA2VDJ0 1609 aa6.76□□□□□ -1.33
ECHDC1-204ENST00000368292 EHBP1L1Q8N3D4 1523 aa6.76□□□□□ -1.33
ECHDC1-204ENST00000368292 CLSPNQ9HAW4 1339 aa6.76□□□□□ -1.33
ECHDC1-204ENST00000368292 ADGRB2O60241 1585 aa6.75□□□□□ -1.33
ECHDC1-204ENST00000368292 CCNB3Q8WWL7 1395 aa6.75□□□□□ -1.33
ECHDC1-204ENST00000368292 LOC102724159A0A0B4J2E5 919 aa6.75□□□□□ -1.33
ECHDC1-204ENST00000368292 ASPAP45381 313 aa6.75□□□□□ -1.33
ECHDC1-204ENST00000368292 LIG3P49916 1009 aa6.75□□□□□ -1.33
ECHDC1-204ENST00000368292 RPS26P62854 115 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-204ENST00000368292 RACK1P63244 317 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-204ENST00000368292 PWP2Q15269 919 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-204ENST00000368292 MAP3K11Q16584 847 aa6.75□□□□□ -1.33
ECHDC1-204ENST00000368292 ZNF394Q53GI3 561 aa6.75□□□□□ -1.33
ECHDC1-204ENST00000368292 AGMOQ6ZNB7 445 aa6.75□□□□□ -1.33
ECHDC1-204ENST00000368292 NOL8Q76FK4 1167 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-204ENST00000368292 GAL3ST3Q96A11 431 aa6.75□□□□□ -1.33
ECHDC1-204ENST00000368292 DRC1Q96MC2 740 aa6.75□□□□□ -1.33
ECHDC1-204ENST00000368292 SEMA6CQ9H3T2 930 aa6.75□□□□□ -1.33
ECHDC1-204ENST00000368292 DDX41Q9UJV9 622 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-204ENST00000368292 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.75□□□□□ -1.33
ECHDC1-204ENST00000368292 PCDHB5Q9Y5E4 795 aa6.75□□□□□ -1.33
ECHDC1-204ENST00000368292 USP32Q8NFA0 1604 aa6.75□□□□□ -1.33
ECHDC1-204ENST00000368292 PTPN23Q9H3S7 1636 aa6.75□□□□□ -1.33
ECHDC1-204ENST00000368292 NOS1P29475 1434 aa6.75□□□□□ -1.33
ECHDC1-204ENST00000368292 CASKIN1Q8WXD9 1431 aa6.75□□□□□ -1.33
ECHDC1-204ENST00000368292 ADGRL3Q9HAR2 1447 aa6.75□□□□□ -1.33
ECHDC1-204ENST00000368292 GCC2Q8IWJ2 1684 aa6.74□□□□□ -1.33
ECHDC1-204ENST00000368292 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-204ENST00000368292 SMARCA5O60264 1052 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-204ENST00000368292 NFICP08651 508 aa6.74□□□□□ -1.33
ECHDC1-204ENST00000368292 HSP90AB4PQ58FF6 505 aa6.74□□□□□ -1.33
ECHDC1-204ENST00000368292 RNF43Q68DV7 783 aa6.74□□□□□ -1.33
ECHDC1-204ENST00000368292 SPATA32Q96LK8 384 aa6.74□□□□□ -1.33
ECHDC1-204ENST00000368292 CCSER2Q9H7U1 834 aa6.74□□□□□ -1.33
ECHDC1-204ENST00000368292 PCDHGB7Q9Y5F8 929 aa6.74□□□□□ -1.33
ECHDC1-204ENST00000368292 PXDNQ92626 1479 aa6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 NRAPQ86VF7 1730 aa6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 NWD2Q9ULI1 1742 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms