RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 TMTC3Q6ZXV5 915 aa20.97■□□□□ 0.95
CCDC7-203ENST00000362006 WASF1Q92558 559 aa20.97■□□□□ 0.95
CCDC7-203ENST00000362006 WDR33Q9C0J8 1336 aaKnown RBP20.97■□□□□ 0.95
CCDC7-203ENST00000362006 UTRNP46939 3433 aa20.96■□□□□ 0.95
CCDC7-203ENST00000362006 STX6O43752 255 aa20.96■□□□□ 0.95
CCDC7-203ENST00000362006 FMNL1O95466 1100 aaPredicted RBP20.96■□□□□ 0.95
CCDC7-203ENST00000362006 PARP1P09874 1014 aaKnown RBP20.96■□□□□ 0.95
CCDC7-203ENST00000362006 EAPPQ56P03 285 aaPredicted RBP20.96■□□□□ 0.95
CCDC7-203ENST00000362006 SMARCA1P28370 1054 aa20.96■□□□□ 0.95
CCDC7-203ENST00000362006 JAG1P78504 1218 aa20.96■□□□□ 0.95
CCDC7-203ENST00000362006 USP48Q86UV5 1035 aa20.96■□□□□ 0.95
CCDC7-203ENST00000362006 RNF26Q9BY78 433 aaPredicted RBP20.96■□□□□ 0.95
CCDC7-203ENST00000362006 SH2D4AQ9H788 454 aa20.96■□□□□ 0.95
CCDC7-203ENST00000362006 RBM27Q9P2N5 1060 aaKnown RBP20.96■□□□□ 0.95
CCDC7-203ENST00000362006 PALM3A6NDB9 673 aaPredicted RBP20.95■□□□□ 0.94
CCDC7-203ENST00000362006 FDPSP14324 419 aaKnown RBP20.95■□□□□ 0.94
CCDC7-203ENST00000362006 AKAP17AQ02040 695 aaKnown RBP20.95■□□□□ 0.94
CCDC7-203ENST00000362006 ASPRV1Q53RT3 343 aa20.95■□□□□ 0.94
CCDC7-203ENST00000362006 CDC37L1Q7L3B6 337 aa20.95■□□□□ 0.94
CCDC7-203ENST00000362006 SIAH1Q8IUQ4 282 aa20.95■□□□□ 0.94
CCDC7-203ENST00000362006 MAD2L2Q9UI95 211 aa20.95■□□□□ 0.94
CCDC7-203ENST00000362006 ATAD5Q96QE3 1844 aa20.95■□□□□ 0.94
CCDC7-203ENST00000362006 BRD1O95696 1058 aa20.95■□□□□ 0.94
CCDC7-203ENST00000362006 SNHG28P0DPA3 235 aa20.95■□□□□ 0.94
CCDC7-203ENST00000362006 NF2P35240 595 aa20.95■□□□□ 0.94
CCDC7-203ENST00000362006 CLEC10AQ8IUN9 316 aa20.95■□□□□ 0.94
CCDC7-203ENST00000362006 LRRC47Q8N1G4 583 aaKnown RBP20.95■□□□□ 0.94
CCDC7-203ENST00000362006 GMCL1P1Q8NEA9 526 aa20.95■□□□□ 0.94
CCDC7-203ENST00000362006 PDHBP11177 359 aa20.94■□□□□ 0.94
CCDC7-203ENST00000362006 SHROOM1Q2M3G4 852 aaPredicted RBP20.94■□□□□ 0.94
CCDC7-203ENST00000362006 PRAMEF18Q5VWM3 479 aa20.94■□□□□ 0.94
CCDC7-203ENST00000362006 NBPF11Q86T75 865 aa20.94■□□□□ 0.94
CCDC7-203ENST00000362006 SLC26A6Q9BXS9 759 aa20.94■□□□□ 0.94
CCDC7-203ENST00000362006 PRPF3O43395 683 aaKnown RBP20.93■□□□□ 0.94
CCDC7-203ENST00000362006 DEXIO95424 95 aa20.93■□□□□ 0.94
CCDC7-203ENST00000362006 GPATCH4Q5T3I0 446 aaKnown RBP20.93■□□□□ 0.94
CCDC7-203ENST00000362006 DCAF4Q8WV16 495 aa20.93■□□□□ 0.94
CCDC7-203ENST00000362006 PHKBQ93100 1093 aa20.93■□□□□ 0.94
CCDC7-203ENST00000362006 ADM5C9JUS6 153 aa20.93■□□□□ 0.94
CCDC7-203ENST00000362006 PPP1R12BO60237 982 aaPredicted RBP20.93■□□□□ 0.94
CCDC7-203ENST00000362006 FUT2Q10981 343 aa20.93■□□□□ 0.94
CCDC7-203ENST00000362006 KLRG1Q96E93 195 aa20.93■□□□□ 0.94
CCDC7-203ENST00000362006 TMX2Q9Y320 296 aa20.93■□□□□ 0.94
CCDC7-203ENST00000362006 PLEKHA8P1O95397 391 aa20.92■□□□□ 0.94
CCDC7-203ENST00000362006 SCYL3Q8IZE3 742 aa20.92■□□□□ 0.94
CCDC7-203ENST00000362006 WRNIP1Q96S55 665 aa20.92■□□□□ 0.94
CCDC7-203ENST00000362006 RRAGCQ9HB90 399 aa20.92■□□□□ 0.94
CCDC7-203ENST00000362006 CLEC11AQ9Y240 323 aa20.92■□□□□ 0.94
CCDC7-203ENST00000362006 MYH6P13533 1939 aa20.92■□□□□ 0.94
CCDC7-203ENST00000362006 DOCK1Q14185 1865 aa20.92■□□□□ 0.94
CCDC7-203ENST00000362006 USP17L5A8MUK1 530 aa20.92■□□□□ 0.94
CCDC7-203ENST00000362006 KLRF2D3W0D1 207 aa20.92■□□□□ 0.94
CCDC7-203ENST00000362006 H3BQV1 296 aa20.92■□□□□ 0.94
CCDC7-203ENST00000362006 IFFO2Q5TF58 517 aa20.92■□□□□ 0.94
CCDC7-203ENST00000362006 SRBD1Q8N5C6 995 aaKnown RBP20.92■□□□□ 0.94
CCDC7-203ENST00000362006 GOPCQ9HD26 462 aa20.92■□□□□ 0.94
CCDC7-203ENST00000362006 MTMR7Q9Y216 660 aa20.92■□□□□ 0.94
CCDC7-203ENST00000362006 SSC5DA1L4H1 1573 aa20.91■□□□□ 0.94
CCDC7-203ENST00000362006 ZSCAN22P10073 491 aaPredicted RBP20.91■□□□□ 0.94
CCDC7-203ENST00000362006 NOL9Q5SY16 702 aaKnown RBP20.91■□□□□ 0.94
CCDC7-203ENST00000362006 SLFN13Q68D06 897 aa20.91■□□□□ 0.94
CCDC7-203ENST00000362006 USP17L2Q6R6M4 530 aa20.91■□□□□ 0.94
CCDC7-203ENST00000362006 STAG2Q8N3U4 1231 aa20.91■□□□□ 0.94
CCDC7-203ENST00000362006 CDCA5Q96FF9 252 aa20.91■□□□□ 0.94
CCDC7-203ENST00000362006 GMCL1Q96IK5 515 aa20.91■□□□□ 0.94
CCDC7-203ENST00000362006 SPZ1Q9BXG8 430 aa20.91■□□□□ 0.94
CCDC7-203ENST00000362006 PICK1Q9NRD5 415 aa20.91■□□□□ 0.94
CCDC7-203ENST00000362006 F5H6K3 240 aa20.9■□□□□ 0.94
CCDC7-203ENST00000362006 DTNBO60941 627 aa20.9■□□□□ 0.94
CCDC7-203ENST00000362006 KLRC3Q07444 240 aa20.9■□□□□ 0.94
CCDC7-203ENST00000362006 ZNF543Q08ER8 600 aa20.9■□□□□ 0.94
CCDC7-203ENST00000362006 PKP1Q13835 747 aa20.9■□□□□ 0.94
CCDC7-203ENST00000362006 CCDC82Q8N4S0 544 aa20.9■□□□□ 0.94
CCDC7-203ENST00000362006 C8orf76Q96K31 380 aa20.9■□□□□ 0.94
CCDC7-203ENST00000362006 ALG1Q9BT22 464 aa20.9■□□□□ 0.94
CCDC7-203ENST00000362006 MTMR6Q9Y217 621 aa20.9■□□□□ 0.94
CCDC7-203ENST00000362006 ZDHHC9Q9Y397 364 aa20.9■□□□□ 0.94
CCDC7-203ENST00000362006 CNTNAP5Q8WYK1 1306 aa20.9■□□□□ 0.94
CCDC7-203ENST00000362006 USP2O75604 605 aaPredicted RBP20.9■□□□□ 0.94
CCDC7-203ENST00000362006 INPP5BP32019 993 aa20.9■□□□□ 0.94
CCDC7-203ENST00000362006 CMTR1Q8N1G2 835 aaKnown RBP20.9■□□□□ 0.94
CCDC7-203ENST00000362006 AS3MTQ9HBK9 375 aa20.9■□□□□ 0.94
CCDC7-203ENST00000362006 V9GY48 417 aaPredicted RBP20.9■□□□□ 0.94
CCDC7-203ENST00000362006 VPS37CA5D8V6 355 aaPredicted RBP20.89■□□□□ 0.94
CCDC7-203ENST00000362006 XBP1P17861 261 aa20.89■□□□□ 0.94
CCDC7-203ENST00000362006 SLC1A4P43007 532 aa20.89■□□□□ 0.94
CCDC7-203ENST00000362006 IREB2P48200 963 aaKnown RBP20.89■□□□□ 0.94
CCDC7-203ENST00000362006 TRIM29Q14134 588 aa20.89■□□□□ 0.94
CCDC7-203ENST00000362006 LDHDQ86WU2 507 aa20.89■□□□□ 0.94
CCDC7-203ENST00000362006 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.89■□□□□ 0.94
CCDC7-203ENST00000362006 ATP6V1DQ9Y5K8 247 aa20.89■□□□□ 0.94
CCDC7-203ENST00000362006 A0A1W2PRG0 241 aa20.89■□□□□ 0.93
CCDC7-203ENST00000362006 PPFIA3O75145 1194 aa20.89■□□□□ 0.93
CCDC7-203ENST00000362006 MAP3K9P80192 1104 aa20.89■□□□□ 0.93
CCDC7-203ENST00000362006 GOLGA8HP0CJ92 632 aa20.88■□□□□ 0.93
CCDC7-203ENST00000362006 CCDC96Q2M329 555 aa20.88■□□□□ 0.93
CCDC7-203ENST00000362006 FBXO18Q8NFZ0 1043 aa20.88■□□□□ 0.93
CCDC7-203ENST00000362006 TNPO1Q92973 898 aaKnown RBP20.88■□□□□ 0.93
CCDC7-203ENST00000362006 WDR18Q9BV38 432 aa20.88■□□□□ 0.93
CCDC7-203ENST00000362006 GLIS2Q9BZE0 524 aaPredicted RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms