RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 KDRP35968 1356 aa6.4□□□□□ -1.39
BRCA1-203ENST00000357654 CADPSQ9ULU8 1353 aa6.4□□□□□ -1.39
BRCA1-203ENST00000357654 GTPBP10A4D1E9 387 aaKnown RBP6.39□□□□□ -1.39
BRCA1-203ENST00000357654 VWA3AA6NCI4 1184 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 WDR64B1ANS9 1081 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 PTPREP23469 700 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 PPP2R1AP30153 589 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 C16orf72Q14CZ0 275 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 ASIC2Q16515 512 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 LONRF3Q496Y0 759 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 CCDC183Q5T5S1 534 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 PRR23CQ6ZRP0 262 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 ADAT2Q7Z6V5 191 aaKnown RBP6.39□□□□□ -1.39
BRCA1-203ENST00000357654 FRMPD2Q68DX3 1309 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-203ENST00000357654 CTAGE15A4D2H0 777 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 CTAGE8P0CG41 777 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 SLC1A4P43007 532 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 CHMP1BQ7LBR1 199 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 CTAGE4Q8IX94 777 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 XAGE3Q8WTP9 111 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 DDX21Q9NR30 783 aaKnown RBP eCLIP6.39□□□□□ -1.39
BRCA1-203ENST00000357654 MAN1C1Q9NR34 630 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 CTTNBP2NLQ9P2B4 639 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 NDUFB9Q9Y6M9 179 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 ANKRD30BQ9BXX2 1392 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 KRT15P19012 456 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 PCK1P35558 622 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 BEND3Q5T5X7 828 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 FAM186BQ8IYM0 893 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 ZCWPW1Q9H0M4 648 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 GRPEL1Q9HAV7 217 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 DBF4Q9UBU7 674 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-203ENST00000357654 ZNF263O14978 683 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 ZMYND10O75800 440 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 HCLS1P14317 486 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-203ENST00000357654 GNA11P29992 359 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 RECQLP46063 649 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-203ENST00000357654 LIG3P49916 1009 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 ATP11AP98196 1134 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 TYRO3Q06418 890 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 TTBK2Q6IQ55 1244 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 BBS5Q8N3I7 341 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 SMAD5Q99717 465 aaKnown RBP6.39□□□□□ -1.39
BRCA1-203ENST00000357654 MBIPQ9NS73 344 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 GEMIN8Q9NWZ8 242 aaKnown RBP6.39□□□□□ -1.39
BRCA1-203ENST00000357654 ZKSCAN5Q9Y2L8 839 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 MAD1L1Q9Y6D9 718 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 NCKAP5LQ9HCH0 1330 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 LRRIQ4A6NIV6 560 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 EXOC3O60645 756 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 DKC1O60832 514 aaKnown RBP eCLIP6.39□□□□□ -1.39
BRCA1-203ENST00000357654 ARHGDIAP52565 204 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 OSTNP61366 133 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 KCTD2Q14681 263 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 CCDC38Q502W7 563 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 LMBR1LQ6UX01 489 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 ANKRD13DQ6ZTN6 518 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 CNGA4Q8IV77 575 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 MAPKAPK5Q8IW41 473 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 SNX25Q9H3E2 840 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 CNNM2Q9H8M5 875 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 CALCOCO1Q9P1Z2 691 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 SLC12A6Q9UHW9 1150 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 BRPF3Q9ULD4 1205 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 RTL9Q8NET4 1388 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 TNIKQ9UKE5 1360 aa6.39□□□□□ -1.39
BRCA1-203ENST00000357654 CFAP69A5D8W1 941 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 BUB1BO60566 1050 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-203ENST00000357654 PPFIA4O75335 1185 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 TMOD1P28289 359 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 CYP2J2P51589 502 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 DAB2P98082 770 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 MIER3Q7Z3K6 550 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 PBXIP1Q96AQ6 731 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 LRGUKQ96M69 825 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 KRT12Q99456 494 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 CDV3Q9UKY7 258 aaKnown RBP6.38□□□□□ -1.39
BRCA1-203ENST00000357654 PRR23AA6NEV1 266 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 UPP2O95045 317 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 BAG2O95816 211 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 DLATP10515 647 aaKnown RBP6.38□□□□□ -1.39
BRCA1-203ENST00000357654 MARK3P27448 753 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 MXD4Q14582 209 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-203ENST00000357654 CCDC93Q567U6 631 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 OTUD6AQ7L8S5 288 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 RAB44Q7Z6P3 723 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-203ENST00000357654 RBSNQ9H1K0 784 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 FLOT1O75955 427 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 VPS41P49754 854 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 POLGP54098 1239 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-203ENST00000357654 RALGDSQ12967 914 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 SLMAPQ14BN4 828 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 C7orf31Q8N865 590 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 BRF1Q92994 677 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 ZFYVE1Q9HBF4 777 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 TRPC7Q9HCX4 862 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 DYRK4Q9NR20 520 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 IFNB1P01574 187 aa6.38□□□□□ -1.39
BRCA1-203ENST00000357654 LACTBP83111 547 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-203ENST00000357654 YWHAHQ04917 246 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms