RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 MKRN3Q13064 507 aaKnown RBP29.76■■■□□ 2.35
SSBP3-202ENST00000357475 MTMR2Q13614 643 aa29.76■■■□□ 2.35
SSBP3-202ENST00000357475 PNMA1Q8ND90 353 aa29.76■■■□□ 2.35
SSBP3-202ENST00000357475 UNCXA6NJT0 531 aa29.75■■■□□ 2.35
SSBP3-202ENST00000357475 PPATQ06203 517 aa29.75■■■□□ 2.35
SSBP3-202ENST00000357475 WNK4Q96J92 1243 aa29.75■■■□□ 2.35
SSBP3-202ENST00000357475 CCDC69A6NI79 296 aa29.74■■■□□ 2.35
SSBP3-202ENST00000357475 ST18O60284 1047 aa29.74■■■□□ 2.35
SSBP3-202ENST00000357475 ZNF654Q8IZM8 581 aa29.74■■■□□ 2.35
SSBP3-202ENST00000357475 AS3MTQ9HBK9 375 aa29.74■■■□□ 2.35
SSBP3-202ENST00000357475 RAD21O60216 631 aa29.73■■■□□ 2.35
SSBP3-202ENST00000357475 APLP1P51693 650 aa29.73■■■□□ 2.35
SSBP3-202ENST00000357475 PPIL2Q13356 520 aa29.73■■■□□ 2.35
SSBP3-202ENST00000357475 APOA5Q6Q788 366 aa29.73■■■□□ 2.35
SSBP3-202ENST00000357475 FEZ1Q99689 392 aa29.73■■■□□ 2.35
SSBP3-202ENST00000357475 NAP1L2Q9ULW6 460 aaPredicted RBP29.73■■■□□ 2.35
SSBP3-202ENST00000357475 USP17L10C9JJH3 530 aa29.72■■■□□ 2.35
SSBP3-202ENST00000357475 EVCP57679 992 aa29.72■■■□□ 2.35
SSBP3-202ENST00000357475 CCDC144CPQ8IYA2 1237 aa29.72■■■□□ 2.35
SSBP3-202ENST00000357475 SPICE1Q8N0Z3 855 aa29.72■■■□□ 2.35
SSBP3-202ENST00000357475 HPS5Q9UPZ3 1129 aa29.72■■■□□ 2.35
SSBP3-202ENST00000357475 F5H6K3 240 aa29.71■■■□□ 2.35
SSBP3-202ENST00000357475 NDUFB10O96000 172 aa29.71■■■□□ 2.35
SSBP3-202ENST00000357475 ZNF157P51786 506 aaPredicted RBP29.71■■■□□ 2.35
SSBP3-202ENST00000357475 BACE1P56817 501 aa29.71■■■□□ 2.35
SSBP3-202ENST00000357475 KLRC3Q07444 240 aa29.71■■■□□ 2.35
SSBP3-202ENST00000357475 TROAPQ12815 778 aa29.71■■■□□ 2.35
SSBP3-202ENST00000357475 PPP4R3BQ5MIZ7 849 aa29.71■■■□□ 2.35
SSBP3-202ENST00000357475 MICU3Q86XE3 530 aa29.71■■■□□ 2.35
SSBP3-202ENST00000357475 RASAL3Q86YV0 1011 aa29.71■■■□□ 2.35
SSBP3-202ENST00000357475 TMTC2Q8N394 836 aa29.71■■■□□ 2.35
SSBP3-202ENST00000357475 NUP88Q99567 741 aaPredicted RBP29.71■■■□□ 2.35
SSBP3-202ENST00000357475 KIAA1683Q9H0B3 1180 aa29.71■■■□□ 2.35
SSBP3-202ENST00000357475 EMILIN3Q9NT22 766 aa29.71■■■□□ 2.35
SSBP3-202ENST00000357475 SLC12A7Q9Y666 1083 aa29.71■■■□□ 2.35
SSBP3-202ENST00000357475 HMGCS2P54868 508 aa29.71■■■□□ 2.35
SSBP3-202ENST00000357475 HTRA3P83110 453 aa29.71■■■□□ 2.35
SSBP3-202ENST00000357475 STK3Q13188 491 aa29.71■■■□□ 2.35
SSBP3-202ENST00000357475 ANKRD1Q15327 319 aa29.71■■■□□ 2.35
SSBP3-202ENST00000357475 RGMBQ6NW40 437 aa29.71■■■□□ 2.35
SSBP3-202ENST00000357475 NUP133Q8WUM0 1156 aa29.71■■■□□ 2.35
SSBP3-202ENST00000357475 VCPKMTQ9H867 229 aa29.71■■■□□ 2.35
SSBP3-202ENST00000357475 LOC285556D6RIA3 1793 aa29.7■■■□□ 2.35
SSBP3-202ENST00000357475 GOLGA8BA8MQT2 603 aa29.7■■■□□ 2.34
SSBP3-202ENST00000357475 PDIA3P30101 505 aaKnown RBP29.7■■■□□ 2.34
SSBP3-202ENST00000357475 ME3Q16798 604 aa29.7■■■□□ 2.34
SSBP3-202ENST00000357475 SPRYD7Q5W111 196 aa29.7■■■□□ 2.34
SSBP3-202ENST00000357475 CATIPQ7Z7H3 387 aa29.7■■■□□ 2.34
SSBP3-202ENST00000357475 KCNH4Q9UQ05 1017 aa29.7■■■□□ 2.34
SSBP3-202ENST00000357475 PDHBP11177 359 aa29.69■■■□□ 2.34
SSBP3-202ENST00000357475 SLFN13Q68D06 897 aa29.69■■■□□ 2.34
SSBP3-202ENST00000357475 GMCL1P1Q8NEA9 526 aa29.69■■■□□ 2.34
SSBP3-202ENST00000357475 TBC1D2Q9BYX2 928 aa29.69■■■□□ 2.34
SSBP3-202ENST00000357475 CREBZFQ9NS37 354 aa29.69■■■□□ 2.34
SSBP3-202ENST00000357475 LIMCH1Q9UPQ0 1083 aa29.69■■■□□ 2.34
SSBP3-202ENST00000357475 USP17L2Q6R6M4 530 aa29.68■■■□□ 2.34
SSBP3-202ENST00000357475 SH2D4AQ9H788 454 aa29.68■■■□□ 2.34
SSBP3-202ENST00000357475 ZBTB43O43298 467 aa29.67■■■□□ 2.34
SSBP3-202ENST00000357475 DTNBO60941 627 aa29.67■■■□□ 2.34
SSBP3-202ENST00000357475 GOLGA8HP0CJ92 632 aa29.67■■■□□ 2.34
SSBP3-202ENST00000357475 ST3GAL1Q11201 340 aa29.67■■■□□ 2.34
SSBP3-202ENST00000357475 NECAB1Q8N987 351 aa29.67■■■□□ 2.34
SSBP3-202ENST00000357475 NCOA5Q9HCD5 579 aaKnown RBP29.67■■■□□ 2.34
SSBP3-202ENST00000357475 GOPCQ9HD26 462 aa29.67■■■□□ 2.34
SSBP3-202ENST00000357475 RBM19Q9Y4C8 960 aaKnown RBP29.67■■■□□ 2.34
SSBP3-202ENST00000357475 FRMPD2Q68DX3 1309 aaPredicted RBP29.67■■■□□ 2.34
SSBP3-202ENST00000357475 FAM155AB1AL88 458 aaPredicted RBP29.66■■■□□ 2.34
SSBP3-202ENST00000357475 DDAH1O94760 285 aa29.66■■■□□ 2.34
SSBP3-202ENST00000357475 SNHG28P0DPA3 235 aa29.66■■■□□ 2.34
SSBP3-202ENST00000357475 CCT2P78371 535 aaKnown RBP29.66■■■□□ 2.34
SSBP3-202ENST00000357475 ZNF274Q96GC6 653 aaPredicted RBP29.66■■■□□ 2.34
SSBP3-202ENST00000357475 SYNPO2Q9UMS6 1093 aa29.66■■■□□ 2.34
SSBP3-202ENST00000357475 A0A0G2JLL6 359 aaPredicted RBP29.66■■■□□ 2.34
SSBP3-202ENST00000357475 SLC10A3P09131 477 aa29.66■■■□□ 2.34
SSBP3-202ENST00000357475 MOGSQ13724 837 aa29.66■■■□□ 2.34
SSBP3-202ENST00000357475 SH3D19Q5HYK7 790 aa29.66■■■□□ 2.34
SSBP3-202ENST00000357475 KCTD1Q719H9 257 aa29.66■■■□□ 2.34
SSBP3-202ENST00000357475 PRRT2Q7Z6L0 340 aaPredicted RBP29.66■■■□□ 2.34
SSBP3-202ENST00000357475 STAG2Q8N3U4 1231 aa29.66■■■□□ 2.34
SSBP3-202ENST00000357475 MS4A4AQ96JQ5 239 aa29.66■■■□□ 2.34
SSBP3-202ENST00000357475 FAM217BQ9NTX9 383 aaPredicted RBP29.66■■■□□ 2.34
SSBP3-202ENST00000357475 CXCL11O14625 94 aa29.65■■■□□ 2.34
SSBP3-202ENST00000357475 CDC27P30260 824 aa29.65■■■□□ 2.34
SSBP3-202ENST00000357475 GRM4Q14833 912 aa29.65■■■□□ 2.34
SSBP3-202ENST00000357475 CYP4F22Q6NT55 531 aa29.65■■■□□ 2.34
SSBP3-202ENST00000357475 SYNE3Q6ZMZ3 975 aa29.65■■■□□ 2.34
SSBP3-202ENST00000357475 SNX21Q969T3 373 aa29.65■■■□□ 2.34
SSBP3-202ENST00000357475 MAD2L2Q9UI95 211 aa29.65■■■□□ 2.34
SSBP3-202ENST00000357475 GOLGA8AA7E2F4 631 aa29.64■■■□□ 2.34
SSBP3-202ENST00000357475 C19orf81C9J6K1 198 aa29.64■■■□□ 2.34
SSBP3-202ENST00000357475 VCAM1P19320 739 aa29.64■■■□□ 2.34
SSBP3-202ENST00000357475 USP14P54578 494 aa29.64■■■□□ 2.34
SSBP3-202ENST00000357475 FAM83BQ5T0W9 1011 aa29.64■■■□□ 2.34
SSBP3-202ENST00000357475 FANCBQ8NB91 859 aa29.64■■■□□ 2.34
SSBP3-202ENST00000357475 GMCL1Q96IK5 515 aa29.64■■■□□ 2.34
SSBP3-202ENST00000357475 TMX3Q96JJ7 454 aa29.64■■■□□ 2.34
SSBP3-202ENST00000357475 CPVLQ9H3G5 476 aa29.64■■■□□ 2.34
SSBP3-202ENST00000357475 PARP14Q460N5 1801 aa29.63■■■□□ 2.33
SSBP3-202ENST00000357475 ZBTB48P10074 688 aaPredicted RBP29.63■■■□□ 2.33
SSBP3-202ENST00000357475 METAP2P50579 478 aaKnown RBP eCLIP29.63■■■□□ 2.331e-6■■■□□ 15.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms