RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 FRMPD3Q5JV73 1810 aa9.79□□□□□ -0.84
CD44-205ENST00000352818 CACNA1HO95180 2353 aa9.79□□□□□ -0.84
CD44-205ENST00000352818 NCOR2Q9Y618 2525 aa9.79□□□□□ -0.84
CD44-205ENST00000352818 TRIM75PA6NK02 468 aa9.79□□□□□ -0.84
CD44-205ENST00000352818 EYA2O00167 538 aa9.79□□□□□ -0.84
CD44-205ENST00000352818 IGHA2P01877 340 aa9.79□□□□□ -0.84
CD44-205ENST00000352818 CSF1RP07333 972 aa9.79□□□□□ -0.84
CD44-205ENST00000352818 GCLCP48506 637 aaPredicted RBP9.79□□□□□ -0.84
CD44-205ENST00000352818 HDLBPQ00341 1268 aaKnown RBP9.79□□□□□ -0.84
CD44-205ENST00000352818 FPGSQ05932 587 aa9.79□□□□□ -0.84
CD44-205ENST00000352818 TFCP2Q12800 502 aa9.79□□□□□ -0.84
CD44-205ENST00000352818 RAB3GAP1Q15042 981 aa9.79□□□□□ -0.84
CD44-205ENST00000352818 C1orf53Q5VUE5 145 aa9.79□□□□□ -0.84
CD44-205ENST00000352818 KLHDC4Q8TBB5 520 aa9.79□□□□□ -0.84
CD44-205ENST00000352818 FAM151AQ8WW52 585 aa9.79□□□□□ -0.84
CD44-205ENST00000352818 HERVK_113Q902F9 699 aa9.79□□□□□ -0.84
CD44-205ENST00000352818 NUDT12Q9BQG2 462 aa9.79□□□□□ -0.84
CD44-205ENST00000352818 CCDC8Q9H0W5 538 aaPredicted RBP9.79□□□□□ -0.84
CD44-205ENST00000352818 NKX2-4Q9H2Z4 354 aa9.79□□□□□ -0.84
CD44-205ENST00000352818 DBNLQ9UJU6 430 aaKnown RBP9.79□□□□□ -0.84
CD44-205ENST00000352818 PTPRFP10586 1907 aa9.78□□□□□ -0.84
CD44-205ENST00000352818 MAP4K4O95819 1239 aaPredicted RBP9.78□□□□□ -0.84
CD44-205ENST00000352818 PTMSP20962 102 aa9.78□□□□□ -0.84
CD44-205ENST00000352818 TCP10Q12799 353 aa9.78□□□□□ -0.84
CD44-205ENST00000352818 CUL4AQ13619 759 aa9.78□□□□□ -0.84
CD44-205ENST00000352818 TMEM240Q5SV17 173 aa9.78□□□□□ -0.84
CD44-205ENST00000352818 KRT40Q6A162 431 aa9.78□□□□□ -0.84
CD44-205ENST00000352818 CLEC17AQ6ZS10 378 aa9.78□□□□□ -0.84
CD44-205ENST00000352818 KIAA1211Q6ZU35 1233 aa9.78□□□□□ -0.84
CD44-205ENST00000352818 PRSS33Q8NF86 280 aa9.78□□□□□ -0.84
CD44-205ENST00000352818 SOCS4Q8WXH5 440 aa9.78□□□□□ -0.84
CD44-205ENST00000352818 HAUS7Q99871 368 aa9.78□□□□□ -0.84
CD44-205ENST00000352818 ASCC2Q9H1I8 757 aaPredicted RBP9.78□□□□□ -0.84
CD44-205ENST00000352818 PORCNQ9H237 461 aa9.78□□□□□ -0.84
CD44-205ENST00000352818 FAM198AQ9UFP1 575 aa9.78□□□□□ -0.84
CD44-205ENST00000352818 PALD1Q9ULE6 856 aa9.78□□□□□ -0.84
CD44-205ENST00000352818 BRWD1Q9NSI6 2320 aa9.78□□□□□ -0.84
CD44-205ENST00000352818 CCDC171Q6TFL3 1326 aa9.78□□□□□ -0.84
CD44-205ENST00000352818 CHD6Q8TD26 2715 aa9.77□□□□□ -0.84
CD44-205ENST00000352818 PLXNA1Q9UIW2 1896 aa9.77□□□□□ -0.85
CD44-205ENST00000352818 DDX11L8A8MPP1 907 aa9.77□□□□□ -0.85
CD44-205ENST00000352818 RFXAPO00287 272 aa9.77□□□□□ -0.85
CD44-205ENST00000352818 HSP90AA1P07900 732 aaKnown RBP9.77□□□□□ -0.85
CD44-205ENST00000352818 MCM4P33991 863 aa9.77□□□□□ -0.85
CD44-205ENST00000352818 GYG1P46976 350 aa9.77□□□□□ -0.85
CD44-205ENST00000352818 SKIV2LQ15477 1246 aaKnown RBP9.77□□□□□ -0.85
CD44-205ENST00000352818 CWC27Q6UX04 472 aaKnown RBP9.77□□□□□ -0.85
CD44-205ENST00000352818 CCDC129Q6ZRS4 1044 aa9.77□□□□□ -0.85
CD44-205ENST00000352818 TRMT44Q8IYL2 757 aaKnown RBP9.77□□□□□ -0.85
CD44-205ENST00000352818 TEKT1Q969V4 418 aa9.77□□□□□ -0.85
CD44-205ENST00000352818 INTS4Q96HW7 963 aaKnown RBP9.77□□□□□ -0.85
CD44-205ENST00000352818 FAM84BQ96KN1 310 aaPredicted RBP9.77□□□□□ -0.85
CD44-205ENST00000352818 MPHOSPH8Q99549 860 aa9.77□□□□□ -0.85
CD44-205ENST00000352818 TM6SF1Q9BZW5 370 aa9.77□□□□□ -0.85
CD44-205ENST00000352818 MTCH2Q9Y6C9 303 aa9.77□□□□□ -0.85
CD44-205ENST00000352818 TPRP12270 2363 aaKnown RBP9.77□□□□□ -0.85
CD44-205ENST00000352818 ATRXP46100 2492 aa9.76□□□□□ -0.85
CD44-205ENST00000352818 RIF1Q5UIP0 2472 aaKnown RBP9.76□□□□□ -0.85
CD44-205ENST00000352818 CLTBP09497 229 aa9.76□□□□□ -0.85
CD44-205ENST00000352818 POU3F3P20264 500 aaPredicted RBP9.76□□□□□ -0.85
CD44-205ENST00000352818 ADCYAP1R1P41586 468 aa9.76□□□□□ -0.85
CD44-205ENST00000352818 NEK4P51957 841 aa9.76□□□□□ -0.85
CD44-205ENST00000352818 NUCB2P80303 420 aa9.76□□□□□ -0.85
CD44-205ENST00000352818 MAP3K10Q02779 954 aa9.76□□□□□ -0.85
CD44-205ENST00000352818 CCDC57Q2TAC2 916 aa9.76□□□□□ -0.85
CD44-205ENST00000352818 Q3C1V9 767 aa9.76□□□□□ -0.85
CD44-205ENST00000352818 SH3BP5LQ7L8J4 393 aa9.76□□□□□ -0.85
CD44-205ENST00000352818 SPRYD3Q8NCJ5 442 aa9.76□□□□□ -0.85
CD44-205ENST00000352818 FERMT2Q96AC1 680 aa9.76□□□□□ -0.85
CD44-205ENST00000352818 APBA2Q99767 749 aa9.76□□□□□ -0.85
CD44-205ENST00000352818 DBNDD2Q9BQY9 259 aa9.76□□□□□ -0.85
CD44-205ENST00000352818 FSD1Q9BTV5 496 aa9.76□□□□□ -0.85
CD44-205ENST00000352818 MRIQ9BWK5 157 aa9.76□□□□□ -0.85
CD44-205ENST00000352818 BOLA2Q9H3K6 86 aa9.76□□□□□ -0.85
CD44-205ENST00000352818 PICK1Q9NRD5 415 aa9.76□□□□□ -0.85
CD44-205ENST00000352818 PNMA3Q9UL41 463 aa9.76□□□□□ -0.85
CD44-205ENST00000352818 AKAP2Q9Y2D5 859 aa9.76□□□□□ -0.85
CD44-205ENST00000352818 SNX14Q9Y5W7 946 aa9.76□□□□□ -0.85
CD44-205ENST00000352818 TACC3Q9Y6A5 838 aa9.76□□□□□ -0.85
CD44-205ENST00000352818 PHIPQ8WWQ0 1821 aa9.75□□□□□ -0.85
CD44-205ENST00000352818 POTEB3A0JP26 581 aa9.75□□□□□ -0.85
CD44-205ENST00000352818 EPOPA6NHQ4 379 aa9.75□□□□□ -0.85
CD44-205ENST00000352818 CYP2E1P05181 493 aaPredicted RBP9.75□□□□□ -0.85
CD44-205ENST00000352818 RAG1P15918 1043 aa9.75□□□□□ -0.85
CD44-205ENST00000352818 DEKP35659 375 aaKnown RBP9.75□□□□□ -0.85
CD44-205ENST00000352818 RGS2P41220 211 aa9.75□□□□□ -0.85
CD44-205ENST00000352818 NMIQ13287 307 aaPredicted RBP9.75□□□□□ -0.85
CD44-205ENST00000352818 ANO1Q5XXA6 986 aa9.75□□□□□ -0.85
CD44-205ENST00000352818 POTEBQ6S5H4 581 aa9.75□□□□□ -0.85
CD44-205ENST00000352818 HFE2Q6ZVN8 426 aa9.75□□□□□ -0.85
CD44-205ENST00000352818 GPR142Q7Z601 462 aa9.75□□□□□ -0.85
CD44-205ENST00000352818 PROCA1Q8NCQ7 364 aaPredicted RBP9.75□□□□□ -0.85
CD44-205ENST00000352818 MAP4K1Q92918 833 aa9.75□□□□□ -0.85
CD44-205ENST00000352818 GBP4Q96PP9 640 aa9.75□□□□□ -0.85
CD44-205ENST00000352818 ALG13Q9NP73 1137 aaKnown RBP9.75□□□□□ -0.85
CD44-205ENST00000352818 TMOD2Q9NZR1 351 aa9.75□□□□□ -0.85
CD44-205ENST00000352818 RBPJLQ9UBG7 517 aa9.75□□□□□ -0.85
CD44-205ENST00000352818 COG5Q9UP83 839 aa9.75□□□□□ -0.85
CD44-205ENST00000352818 CHMP3Q9Y3E7 222 aa9.75□□□□□ -0.85
CD44-205ENST00000352818 MYH7P12883 1935 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms