RNA–Protein interactions for RNA: ENST00000349995.9

COG3-201, Transcript of component of oligomeric golgi complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COG3, Length 4,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-201ENST00000349995 RFC1P35251 1148 aaPredicted RBP16.81■□□□□ 0.28
COG3-201ENST00000349995 STAMQ92783 540 aa16.81■□□□□ 0.28
COG3-201ENST00000349995 SMC6Q96SB8 1091 aa16.81■□□□□ 0.28
COG3-201ENST00000349995 NAP1L3Q99457 506 aaPredicted RBP16.81■□□□□ 0.28
COG3-201ENST00000349995 TLR7Q9NYK1 1049 aaKnown RBP16.81■□□□□ 0.28
COG3-201ENST00000349995 AOX1Q06278 1338 aa16.81■□□□□ 0.28
COG3-201ENST00000349995 UBAP1LF5GYI3 381 aa16.81■□□□□ 0.28
COG3-201ENST00000349995 ITGA6P23229 1130 aa16.81■□□□□ 0.28
COG3-201ENST00000349995 DZIP1Q86YF9 867 aaKnown RBP16.81■□□□□ 0.28
COG3-201ENST00000349995 RIN2Q8WYP3 895 aaPredicted RBP16.81■□□□□ 0.28
COG3-201ENST00000349995 A0A0D9SFI3 127 aa16.81■□□□□ 0.28
COG3-201ENST00000349995 SKAP2O75563 359 aaPredicted RBP16.81■□□□□ 0.28
COG3-201ENST00000349995 KLHL29Q96CT2 875 aa16.81■□□□□ 0.28
COG3-201ENST00000349995 TCHPQ9BT92 498 aa16.81■□□□□ 0.28
COG3-201ENST00000349995 ACTR5Q9H9F9 607 aaPredicted RBP16.81■□□□□ 0.28
COG3-201ENST00000349995 SYNRGQ9UMZ2 1314 aa16.81■□□□□ 0.28
COG3-201ENST00000349995 USP5P45974 858 aa16.8■□□□□ 0.28
COG3-201ENST00000349995 COG7P83436 770 aa16.8■□□□□ 0.28
COG3-201ENST00000349995 E4F1Q66K89 784 aaPredicted RBP16.8■□□□□ 0.28
COG3-201ENST00000349995 NBPF5PQ86XG9 351 aaPredicted RBP16.8■□□□□ 0.28
COG3-201ENST00000349995 MCUR1Q96AQ8 359 aa16.8■□□□□ 0.28
COG3-201ENST00000349995 KDRP35968 1356 aa16.8■□□□□ 0.28
COG3-201ENST00000349995 PRC1O43663 620 aa16.8■□□□□ 0.28
COG3-201ENST00000349995 SH2D4BQ5SQS7 431 aa16.8■□□□□ 0.28
COG3-201ENST00000349995 MIGA1Q8NAN2 632 aa16.8■□□□□ 0.28
COG3-201ENST00000349995 ACRBPQ8NEB7 543 aa16.8■□□□□ 0.28
COG3-201ENST00000349995 SUGCTQ9HAC7 445 aa16.8■□□□□ 0.28
COG3-201ENST00000349995 RMND1Q9NWS8 449 aa16.8■□□□□ 0.28
COG3-201ENST00000349995 NKIRAS1Q9NYS0 192 aa16.8■□□□□ 0.28
COG3-201ENST00000349995 UQCRFS1P1P0C7P4 283 aa16.8■□□□□ 0.28
COG3-201ENST00000349995 GUCY2DQ02846 1103 aa16.8■□□□□ 0.28
COG3-201ENST00000349995 MFSD6Q6ZSS7 791 aa16.8■□□□□ 0.28
COG3-201ENST00000349995 CCDC197Q8NCU1 140 aa16.8■□□□□ 0.28
COG3-201ENST00000349995 NOP53Q9NZM5 478 aaKnown RBP16.8■□□□□ 0.28
COG3-201ENST00000349995 CPS1P31327 1500 aa16.8■□□□□ 0.28
COG3-201ENST00000349995 ZBTB43O43298 467 aa16.8■□□□□ 0.28
COG3-201ENST00000349995 GCFC2P16383 781 aaKnown RBP16.8■□□□□ 0.28
COG3-201ENST00000349995 IFI16Q16666 785 aaKnown RBP16.8■□□□□ 0.28
COG3-201ENST00000349995 WDR24Q96S15 920 aa16.8■□□□□ 0.28
COG3-201ENST00000349995 UBA5Q9GZZ9 404 aa16.8■□□□□ 0.28
COG3-201ENST00000349995 CLTCQ00610 1675 aaKnown RBP16.79■□□□□ 0.28
COG3-201ENST00000349995 NLRP5P59047 1200 aa16.79■□□□□ 0.28
COG3-201ENST00000349995 XAGE2Q96GT9 111 aa16.79■□□□□ 0.28
COG3-201ENST00000349995 hCG_2014768A0A024R1R8 64 aa16.79■□□□□ 0.28
COG3-201ENST00000349995 CYP7A1P22680 504 aa16.79■□□□□ 0.28
COG3-201ENST00000349995 MAGEA1P43355 309 aa16.79■□□□□ 0.28
COG3-201ENST00000349995 CFAP221Q4G0U5 840 aa16.79■□□□□ 0.28
COG3-201ENST00000349995 SARM1Q6SZW1 724 aa16.79■□□□□ 0.28
COG3-201ENST00000349995 PARP9Q8IXQ6 854 aa16.79■□□□□ 0.28
COG3-201ENST00000349995 MORC4Q8TE76 937 aa16.79■□□□□ 0.28
COG3-201ENST00000349995 OSBPL3Q9H4L5 887 aa16.79■□□□□ 0.28
COG3-201ENST00000349995 MKNK2Q9HBH9 465 aa16.79■□□□□ 0.28
COG3-201ENST00000349995 OPHN1O60890 802 aa16.79■□□□□ 0.28
COG3-201ENST00000349995 ANKRD42Q8N9B4 389 aa16.79■□□□□ 0.28
COG3-201ENST00000349995 UHMK1Q8TAS1 419 aaKnown RBP16.79■□□□□ 0.28
COG3-201ENST00000349995 JAG2Q9Y219 1238 aa16.79■□□□□ 0.28
COG3-201ENST00000349995 MED14O60244 1454 aa16.79■□□□□ 0.28
COG3-201ENST00000349995 CUTAO60888 179 aa16.78■□□□□ 0.28
COG3-201ENST00000349995 TBC1D8O95759 1140 aa16.78■□□□□ 0.28
COG3-201ENST00000349995 PDHA1P08559 390 aa16.78■□□□□ 0.28
COG3-201ENST00000349995 NR1D1P20393 614 aa16.78■□□□□ 0.28
COG3-201ENST00000349995 CASP14P31944 242 aa16.78■□□□□ 0.28
COG3-201ENST00000349995 STAT6P42226 847 aa16.78■□□□□ 0.28
COG3-201ENST00000349995 VSNL1P62760 191 aa16.78■□□□□ 0.28
COG3-201ENST00000349995 SCRN1Q12765 414 aa16.78■□□□□ 0.28
COG3-201ENST00000349995 KBTBD3Q8NAB2 608 aa16.78■□□□□ 0.28
COG3-201ENST00000349995 CD2APQ9Y5K6 639 aa16.78■□□□□ 0.28
COG3-201ENST00000349995 CEP104O60308 925 aa16.78■□□□□ 0.28
COG3-201ENST00000349995 TSGA10Q9BZW7 698 aa16.78■□□□□ 0.28
COG3-201ENST00000349995 STAP2Q9UGK3 403 aa16.78■□□□□ 0.28
COG3-201ENST00000349995 ASAP1Q9ULH1 1129 aa16.78■□□□□ 0.28
COG3-201ENST00000349995 TRIM75PA6NK02 468 aa16.78■□□□□ 0.28
COG3-201ENST00000349995 PRR29P0C7W0 189 aa16.78■□□□□ 0.28
COG3-201ENST00000349995 NAA16Q6N069 864 aaPredicted RBP16.78■□□□□ 0.28
COG3-201ENST00000349995 IRX2Q9BZI1 471 aaPredicted RBP16.78■□□□□ 0.28
COG3-201ENST00000349995 H2AFXP16104 143 aaPredicted RBP16.78■□□□□ 0.28
COG3-201ENST00000349995 PAX7P23759 505 aa16.78■□□□□ 0.28
COG3-201ENST00000349995 DDIT3P35638 169 aa16.78■□□□□ 0.28
COG3-201ENST00000349995 RBM5P52756 815 aaKnown RBP eCLIP16.78■□□□□ 0.28
COG3-201ENST00000349995 SLC7A5Q01650 507 aa16.78■□□□□ 0.28
COG3-201ENST00000349995 LRRC24Q50LG9 513 aa16.78■□□□□ 0.28
COG3-201ENST00000349995 KIF9Q9HAQ2 790 aa16.78■□□□□ 0.28
COG3-201ENST00000349995 PSD3Q9NYI0 1048 aa16.78■□□□□ 0.28
COG3-201ENST00000349995 SLC4A4Q9Y6R1 1079 aa16.78■□□□□ 0.28
COG3-201ENST00000349995 TAF5LO75529 589 aa16.77■□□□□ 0.28
COG3-201ENST00000349995 POSTNQ15063 836 aa16.77■□□□□ 0.28
COG3-201ENST00000349995 ANKRD13CQ8N6S4 541 aa16.77■□□□□ 0.28
COG3-201ENST00000349995 CCDC77Q9BR77 488 aa16.77■□□□□ 0.28
COG3-201ENST00000349995 VCX3BQ9H321 246 aa16.77■□□□□ 0.28
COG3-201ENST00000349995 VCX3AQ9NNX9 186 aa16.77■□□□□ 0.28
COG3-201ENST00000349995 RASAL2Q9UJF2 1139 aa16.77■□□□□ 0.28
COG3-201ENST00000349995 EPN1Q9Y6I3 576 aaPredicted RBP16.77■□□□□ 0.28
COG3-201ENST00000349995 TOGARAM2Q6ZUX3 1019 aa16.77■□□□□ 0.28
COG3-201ENST00000349995 VPS52Q8N1B4 723 aa16.77■□□□□ 0.28
COG3-201ENST00000349995 CCDC24Q8N4L8 307 aa16.77■□□□□ 0.28
COG3-201ENST00000349995 KCNV2Q8TDN2 545 aa16.77■□□□□ 0.28
COG3-201ENST00000349995 TM6SF1Q9BZW5 370 aa16.77■□□□□ 0.28
COG3-201ENST00000349995 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.77■□□□□ 0.285e-12■■■■■ 96.1
COG3-201ENST00000349995 MTRF1LQ9UGC7 380 aaKnown RBP16.77■□□□□ 0.28
COG3-201ENST00000349995 CREB3O43889 395 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms