RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 OVOS2A0A0G2JMS6 1433 aa20.07■□□□□ 0.8
APP-202ENST00000348990 NFAT5O94916 1531 aa20.07■□□□□ 0.8
APP-202ENST00000348990 MAP3K12Q12852 859 aa20.07■□□□□ 0.8
APP-202ENST00000348990 PAK1Q13153 545 aa20.07■□□□□ 0.8
APP-202ENST00000348990 KIF6Q6ZMV9 814 aa20.07■□□□□ 0.8
APP-202ENST00000348990 BRMS1Q9HCU9 246 aa20.07■□□□□ 0.8
APP-202ENST00000348990 GOLGA6CA6NDK9 693 aa20.06■□□□□ 0.8
APP-202ENST00000348990 GOLGA6DP0CG33 693 aa20.06■□□□□ 0.8
APP-202ENST00000348990 APTXQ7Z2E3 356 aaKnown RBP20.06■□□□□ 0.8
APP-202ENST00000348990 ZNF654Q8IZM8 581 aa20.06■□□□□ 0.8
APP-202ENST00000348990 GSDMAQ96QA5 445 aa20.06■□□□□ 0.8
APP-202ENST00000348990 PSMB7Q99436 277 aa20.06■□□□□ 0.8
APP-202ENST00000348990 CNNM2Q9H8M5 875 aa20.06■□□□□ 0.8
APP-202ENST00000348990 GOLGA6AQ9NYA3 693 aa20.06■□□□□ 0.8
APP-202ENST00000348990 IQSEC3Q9UPP2 1182 aaPredicted RBP20.06■□□□□ 0.8
APP-202ENST00000348990 ANKRD18BA2A2Z9 1011 aa20.06■□□□□ 0.8
APP-202ENST00000348990 PATL2C9JE40 543 aaKnown RBP20.06■□□□□ 0.8
APP-202ENST00000348990 CUL4BQ13620 913 aa20.06■□□□□ 0.8
APP-202ENST00000348990 ZNF579Q8NAF0 562 aaKnown RBP20.06■□□□□ 0.8
APP-202ENST00000348990 PLIN2Q99541 437 aa20.06■□□□□ 0.8
APP-202ENST00000348990 PPP1R3GB7ZBB8 358 aa20.06■□□□□ 0.8
APP-202ENST00000348990 MCM3P25205 808 aa20.06■□□□□ 0.8
APP-202ENST00000348990 ARHGAP25P42331 645 aa20.06■□□□□ 0.8
APP-202ENST00000348990 DPYDQ12882 1025 aa20.06■□□□□ 0.8
APP-202ENST00000348990 RUFY1Q96T51 708 aa20.06■□□□□ 0.8
APP-202ENST00000348990 MCM7P33993 719 aa20.05■□□□□ 0.8
APP-202ENST00000348990 KRT2P35908 639 aa20.05■□□□□ 0.8
APP-202ENST00000348990 USP14P54578 494 aa20.05■□□□□ 0.8
APP-202ENST00000348990 UBE3CQ15386 1083 aa20.05■□□□□ 0.8
APP-202ENST00000348990 JAKMIP2Q96AA8 810 aa20.05■□□□□ 0.8
APP-202ENST00000348990 ZNHIT6Q9NWK9 470 aaKnown RBP20.05■□□□□ 0.8
APP-202ENST00000348990 EBAG9O00559 213 aa20.05■□□□□ 0.8
APP-202ENST00000348990 ZNF185O15231 689 aa20.05■□□□□ 0.8
APP-202ENST00000348990 CORO7P57737 925 aa20.05■□□□□ 0.8
APP-202ENST00000348990 SPAG1Q07617 926 aa20.05■□□□□ 0.8
APP-202ENST00000348990 TCIRG1Q13488 830 aa20.05■□□□□ 0.8
APP-202ENST00000348990 OR8K1Q8NGG5 319 aa20.05■□□□□ 0.8
APP-202ENST00000348990 LMO7Q8WWI1 1683 aa20.05■□□□□ 0.8
APP-202ENST00000348990 GOLGA6BA6NDN3 693 aa20.04■□□□□ 0.8
APP-202ENST00000348990 PTGDRQ13258 359 aa20.04■□□□□ 0.8
APP-202ENST00000348990 CDKAL1Q5VV42 579 aa20.04■□□□□ 0.8
APP-202ENST00000348990 EPB41L4AQ9HCS5 686 aaPredicted RBP20.04■□□□□ 0.8
APP-202ENST00000348990 MAGEC2Q9UBF1 373 aaPredicted RBP20.04■□□□□ 0.8
APP-202ENST00000348990 GDAQ9Y2T3 454 aa20.04■□□□□ 0.8
APP-202ENST00000348990 IDEP14735 1019 aa20.04■□□□□ 0.8
APP-202ENST00000348990 TRIM21P19474 475 aaKnown RBP20.04■□□□□ 0.8
APP-202ENST00000348990 EARS2Q5JPH6 523 aaKnown RBP20.04■□□□□ 0.8
APP-202ENST00000348990 SND1Q7KZF4 910 aaKnown RBP eCLIP20.04■□□□□ 0.84e-8■■■□□ 18.6
APP-202ENST00000348990 TTC26A0AVF1 554 aa20.04■□□□□ 0.8
APP-202ENST00000348990 PPARDQ03181 441 aa20.04■□□□□ 0.8
APP-202ENST00000348990 AATFQ9NY61 560 aaKnown RBP eCLIP20.04■□□□□ 0.8
APP-202ENST00000348990 LRP2BPQ9P2M1 347 aa20.04■□□□□ 0.8
APP-202ENST00000348990 MYO1AQ9UBC5 1043 aa20.04■□□□□ 0.8
APP-202ENST00000348990 HPCAL4Q9UM19 191 aa20.04■□□□□ 0.8
APP-202ENST00000348990 A0A0G2JS52 829 aa20.03■□□□□ 0.8
APP-202ENST00000348990 H0YHG0 523 aa20.03■□□□□ 0.8
APP-202ENST00000348990 MNAT1P51948 309 aa20.03■□□□□ 0.8
APP-202ENST00000348990 C2orf54Q08AI8 447 aa20.03■□□□□ 0.8
APP-202ENST00000348990 PAXIP1Q6ZW49 1069 aaPredicted RBP20.03■□□□□ 0.8
APP-202ENST00000348990 ELOA2Q8IYF1 753 aaPredicted RBP20.03■□□□□ 0.8
APP-202ENST00000348990 STK36Q9NRP7 1315 aa20.03■□□□□ 0.8
APP-202ENST00000348990 TRIM49BA6NDI0 452 aa20.03■□□□□ 0.8
APP-202ENST00000348990 KRT86O43790 486 aa20.03■□□□□ 0.8
APP-202ENST00000348990 CYP27A1Q02318 531 aa20.03■□□□□ 0.8
APP-202ENST00000348990 BCAS4Q8TDM0 211 aa20.03■□□□□ 0.8
APP-202ENST00000348990 TRIM47Q96LD4 638 aa20.03■□□□□ 0.8
APP-202ENST00000348990 ABCF2Q9UG63 623 aa20.03■□□□□ 0.8
APP-202ENST00000348990 SYF2O95926 243 aaKnown RBP20.03■□□□□ 0.8
APP-202ENST00000348990 PBX1P40424 430 aa20.03■□□□□ 0.8
APP-202ENST00000348990 DNA2P51530 1060 aa20.03■□□□□ 0.8
APP-202ENST00000348990 TCP11X2Q5H9J9 407 aa20.03■□□□□ 0.8
APP-202ENST00000348990 HAUS4Q9H6D7 363 aa20.03■□□□□ 0.8
APP-202ENST00000348990 SHTN1A0MZ66 631 aa20.02■□□□□ 0.8
APP-202ENST00000348990 TTC38Q5R3I4 469 aa20.02■□□□□ 0.8
APP-202ENST00000348990 PROSER2Q86WR7 435 aaPredicted RBP20.02■□□□□ 0.8
APP-202ENST00000348990 COG1Q8WTW3 980 aa20.02■□□□□ 0.8
APP-202ENST00000348990 EHD4Q9H223 541 aa20.02■□□□□ 0.8
APP-202ENST00000348990 TRMT112Q9UI30 125 aaKnown RBP20.02■□□□□ 0.8
APP-202ENST00000348990 SAMM50Q9Y512 469 aa20.02■□□□□ 0.8
APP-202ENST00000348990 CKAP4Q07065 602 aaKnown RBP20.02■□□□□ 0.8
APP-202ENST00000348990 TTLL11Q8NHH1 800 aa20.02■□□□□ 0.8
APP-202ENST00000348990 SELENOOQ9BVL4 669 aa20.02■□□□□ 0.8
APP-202ENST00000348990 ERLIN2O94905 339 aa20.01■□□□□ 0.79
APP-202ENST00000348990 PIK3AP1Q6ZUJ8 805 aa20.01■□□□□ 0.79
APP-202ENST00000348990 TOM1L2Q6ZVM7 507 aa20.01■□□□□ 0.79
APP-202ENST00000348990 TADA2BQ86TJ2 420 aa20.01■□□□□ 0.79
APP-202ENST00000348990 POLD4Q9HCU8 107 aa20.01■□□□□ 0.79
APP-202ENST00000348990 BAZ2BQ9UIF8 2168 aaKnown RBP20.01■□□□□ 0.79
APP-202ENST00000348990 NAP1L1P55209 391 aaKnown RBP20.01■□□□□ 0.79
APP-202ENST00000348990 EFCAB13Q8IY85 973 aa20.01■□□□□ 0.79
APP-202ENST00000348990 KAT14Q9H8E8 782 aa20.01■□□□□ 0.79
APP-202ENST00000348990 MTMR7Q9Y216 660 aa20.01■□□□□ 0.79
APP-202ENST00000348990 WDR93Q6P2C0 686 aa20.01■□□□□ 0.79
APP-202ENST00000348990 WNT7AO00755 349 aa20■□□□□ 0.79
APP-202ENST00000348990 NLRP5P59047 1200 aa20■□□□□ 0.79
APP-202ENST00000348990 CCDC96Q2M329 555 aa20■□□□□ 0.79
APP-202ENST00000348990 SPATA20Q8TB22 786 aa20■□□□□ 0.79
APP-202ENST00000348990 PARP1P09874 1014 aaKnown RBP20■□□□□ 0.79
APP-202ENST00000348990 GNGT1P63211 74 aa20■□□□□ 0.79
APP-202ENST00000348990 KRT83P78385 493 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms