RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 PKNOX2Q96KN3 472 aa24.42■■□□□ 1.5
CCDC38-201ENST00000344280 MKRN1Q9UHC7 482 aaKnown RBP24.42■■□□□ 1.5
CCDC38-201ENST00000344280 NPHP1O15259 732 aa24.41■■□□□ 1.5
CCDC38-201ENST00000344280 SLFN14P0C7P3 912 aa24.41■■□□□ 1.5
CCDC38-201ENST00000344280 CD44P16070 742 aaKnown RBP24.41■■□□□ 1.5
CCDC38-201ENST00000344280 DIXDC1Q155Q3 683 aa24.41■■□□□ 1.5
CCDC38-201ENST00000344280 SH3RF1Q7Z6J0 888 aa24.41■■□□□ 1.5
CCDC38-201ENST00000344280 TMEM139Q8IV31 216 aa24.41■■□□□ 1.5
CCDC38-201ENST00000344280 ANKIB1Q9P2G1 1089 aa24.41■■□□□ 1.5
CCDC38-201ENST00000344280 CDK11BP21127 795 aaKnown RBP24.41■■□□□ 1.5
CCDC38-201ENST00000344280 SMYD4Q8IYR2 804 aaPredicted RBP24.41■■□□□ 1.5
CCDC38-201ENST00000344280 STAMQ92783 540 aa24.41■■□□□ 1.5
CCDC38-201ENST00000344280 PLCD1P51178 756 aa24.4■■□□□ 1.5
CCDC38-201ENST00000344280 NLRP5P59047 1200 aa24.4■■□□□ 1.5
CCDC38-201ENST00000344280 ATP2C1P98194 919 aaPredicted RBP24.4■■□□□ 1.5
CCDC38-201ENST00000344280 PFKFB3Q16875 520 aaPredicted RBP24.4■■□□□ 1.5
CCDC38-201ENST00000344280 SH3RF3Q8TEJ3 882 aaPredicted RBP24.4■■□□□ 1.5
CCDC38-201ENST00000344280 FERMT2Q96AC1 680 aa24.4■■□□□ 1.5
CCDC38-201ENST00000344280 CCDC88AQ3V6T2 1871 aa24.4■■□□□ 1.5
CCDC38-201ENST00000344280 NRDCO43847 1150 aa24.4■■□□□ 1.5
CCDC38-201ENST00000344280 TFAP4Q01664 338 aa24.4■■□□□ 1.5
CCDC38-201ENST00000344280 TBX2Q13207 712 aaPredicted RBP24.4■■□□□ 1.5
CCDC38-201ENST00000344280 DHX8Q14562 1220 aaKnown RBP24.4■■□□□ 1.5
CCDC38-201ENST00000344280 IL17AQ16552 155 aa24.4■■□□□ 1.5
CCDC38-201ENST00000344280 STAG2Q8N3U4 1231 aa24.4■■□□□ 1.5
CCDC38-201ENST00000344280 DACH1Q9UI36 760 aa24.4■■□□□ 1.5
CCDC38-201ENST00000344280 C12orf60Q5U649 245 aa24.39■■□□□ 1.5
CCDC38-201ENST00000344280 KLHL10Q6JEL2 608 aa24.39■■□□□ 1.5
CCDC38-201ENST00000344280 MCM7P33993 719 aa24.38■■□□□ 1.49
CCDC38-201ENST00000344280 STX17P56962 302 aa24.38■■□□□ 1.49
CCDC38-201ENST00000344280 GPKOWQ92917 476 aaPredicted RBP eCLIP24.38■■□□□ 1.49
CCDC38-201ENST00000344280 KIF2AO00139 706 aaPredicted RBP24.38■■□□□ 1.49
CCDC38-201ENST00000344280 DPYDQ12882 1025 aa24.38■■□□□ 1.49
CCDC38-201ENST00000344280 MAST2Q6P0Q8 1798 aa24.38■■□□□ 1.49
CCDC38-201ENST00000344280 USP17L3A6NCW0 530 aa24.37■■□□□ 1.49
CCDC38-201ENST00000344280 USP17L4A6NCW7 530 aa24.37■■□□□ 1.49
CCDC38-201ENST00000344280 SPDYE4A6NLX3 237 aa24.37■■□□□ 1.49
CCDC38-201ENST00000344280 FANCGO15287 622 aa24.37■■□□□ 1.49
CCDC38-201ENST00000344280 LDHBP07195 334 aaKnown RBP24.37■■□□□ 1.49
CCDC38-201ENST00000344280 ADKP55263 362 aaKnown RBP24.37■■□□□ 1.49
CCDC38-201ENST00000344280 CBX1P83916 185 aa24.37■■□□□ 1.49
CCDC38-201ENST00000344280 USP17L1Q7RTZ2 530 aa24.37■■□□□ 1.49
CCDC38-201ENST00000344280 SLC44A5Q8NCS7 719 aa24.37■■□□□ 1.49
CCDC38-201ENST00000344280 NOL10Q9BSC4 688 aaKnown RBP24.37■■□□□ 1.49
CCDC38-201ENST00000344280 FAM205AQ6ZU69 1335 aa24.37■■□□□ 1.49
CCDC38-201ENST00000344280 BMP15O95972 392 aa24.37■■□□□ 1.49
CCDC38-201ENST00000344280 USP5P45974 858 aa24.37■■□□□ 1.49
CCDC38-201ENST00000344280 LRRN4CLQ8ND94 238 aa24.37■■□□□ 1.49
CCDC38-201ENST00000344280 KAT14Q9H8E8 782 aa24.37■■□□□ 1.49
CCDC38-201ENST00000344280 ERCC5P28715 1186 aaPredicted RBP24.36■■□□□ 1.49
CCDC38-201ENST00000344280 CUL4BQ13620 913 aa24.36■■□□□ 1.49
CCDC38-201ENST00000344280 TYW1BQ6NUM6 668 aa24.36■■□□□ 1.49
CCDC38-201ENST00000344280 TC2NQ8N9U0 490 aa24.36■■□□□ 1.49
CCDC38-201ENST00000344280 RASGRP4Q8TDF6 673 aa24.36■■□□□ 1.49
CCDC38-201ENST00000344280 SBF2Q86WG5 1849 aa24.36■■□□□ 1.49
CCDC38-201ENST00000344280 COBLO75128 1261 aa24.36■■□□□ 1.49
CCDC38-201ENST00000344280 RFC4P35249 363 aa24.36■■□□□ 1.49
CCDC38-201ENST00000344280 E2F4Q16254 413 aa24.36■■□□□ 1.49
CCDC38-201ENST00000344280 SLC35G1Q2M3R5 365 aa24.36■■□□□ 1.49
CCDC38-201ENST00000344280 SPTY2D1Q68D10 685 aaPredicted RBP24.36■■□□□ 1.49
CCDC38-201ENST00000344280 SPECC1LQ69YQ0 1117 aa24.36■■□□□ 1.49
CCDC38-201ENST00000344280 APTXQ7Z2E3 356 aaKnown RBP24.36■■□□□ 1.49
CCDC38-201ENST00000344280 HOMER1Q86YM7 354 aa24.36■■□□□ 1.49
CCDC38-201ENST00000344280 REXO1L1PQ8IX06 675 aa24.36■■□□□ 1.49
CCDC38-201ENST00000344280 PNMA1Q8ND90 353 aa24.36■■□□□ 1.49
CCDC38-201ENST00000344280 BLZF1Q9H2G9 400 aa24.36■■□□□ 1.49
CCDC38-201ENST00000344280 EP400Q96L91 3159 aa24.36■■□□□ 1.49
CCDC38-201ENST00000344280 XDHP47989 1333 aa24.35■■□□□ 1.49
CCDC38-201ENST00000344280 TOM1O60784 492 aa24.35■■□□□ 1.49
CCDC38-201ENST00000344280 GRAPQ13588 217 aa24.35■■□□□ 1.49
CCDC38-201ENST00000344280 NR1I3Q14994 352 aa24.35■■□□□ 1.49
CCDC38-201ENST00000344280 TRIM65Q6PJ69 517 aa24.35■■□□□ 1.49
CCDC38-201ENST00000344280 GRAPLQ8TC17 118 aaPredicted RBP24.35■■□□□ 1.49
CCDC38-201ENST00000344280 MTRQ99707 1265 aa24.35■■□□□ 1.49
CCDC38-201ENST00000344280 L2HGDHQ9H9P8 463 aa24.35■■□□□ 1.49
CCDC38-201ENST00000344280 MTMR7Q9Y216 660 aa24.35■■□□□ 1.49
CCDC38-201ENST00000344280 CDC25AP30304 524 aa24.35■■□□□ 1.49
CCDC38-201ENST00000344280 TGFBRAP1Q8WUH2 860 aa24.35■■□□□ 1.49
CCDC38-201ENST00000344280 PPP1R3GB7ZBB8 358 aa24.34■■□□□ 1.49
CCDC38-201ENST00000344280 TEX33O43247 280 aa24.34■■□□□ 1.49
CCDC38-201ENST00000344280 SLU7O95391 586 aaKnown RBP24.33■■□□□ 1.49
CCDC38-201ENST00000344280 KIF5BP33176 963 aa24.33■■□□□ 1.49
CCDC38-201ENST00000344280 ELF2Q15723 593 aa24.33■■□□□ 1.49
CCDC38-201ENST00000344280 WDR66Q8TBY9 1149 aa24.33■■□□□ 1.49
CCDC38-201ENST00000344280 BAG1Q99933 345 aaPredicted RBP24.33■■□□□ 1.49
CCDC38-201ENST00000344280 MAD2L2Q9UI95 211 aa24.33■■□□□ 1.49
CCDC38-201ENST00000344280 A0A1B0GTH6 734 aa24.33■■□□□ 1.49
CCDC38-201ENST00000344280 ETF1P62495 437 aaKnown RBP24.33■■□□□ 1.49
CCDC38-201ENST00000344280 CCDC93Q567U6 631 aa24.33■■□□□ 1.49
CCDC38-201ENST00000344280 TRAPPC3LQ5T215 181 aa24.33■■□□□ 1.49
CCDC38-201ENST00000344280 RASGRP2Q7LDG7 609 aa24.33■■□□□ 1.49
CCDC38-201ENST00000344280 DGKHQ86XP1 1220 aa24.33■■□□□ 1.49
CCDC38-201ENST00000344280 FNBP4Q8N3X1 1017 aaPredicted RBP24.33■■□□□ 1.49
CCDC38-201ENST00000344280 ERO1AQ96HE7 468 aa24.33■■□□□ 1.49
CCDC38-201ENST00000344280 GSDMAQ96QA5 445 aa24.33■■□□□ 1.49
CCDC38-201ENST00000344280 SAP30BPQ9UHR5 308 aaKnown RBP24.33■■□□□ 1.49
CCDC38-201ENST00000344280 DNAI1Q9UI46 699 aa24.33■■□□□ 1.49
CCDC38-201ENST00000344280 SYNRGQ9UMZ2 1314 aa24.33■■□□□ 1.48
CCDC38-201ENST00000344280 FAM196AQ6ZSG2 479 aa24.32■■□□□ 1.48
CCDC38-201ENST00000344280 MKNK2Q9HBH9 465 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms