RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 EXOC6Q8TAG9 804 aa20.47■□□□□ 0.87
BRCC3-202ENST00000340647 TRIB2Q92519 343 aa20.47■□□□□ 0.87
BRCC3-202ENST00000340647 CCDC17Q96LX7 622 aa20.47■□□□□ 0.87
BRCC3-202ENST00000340647 BIN2Q9UBW5 565 aaPredicted RBP20.47■□□□□ 0.87
BRCC3-202ENST00000340647 RABGAP1Q9Y3P9 1069 aa20.47■□□□□ 0.87
BRCC3-202ENST00000340647 PDE1AP54750 535 aa20.46■□□□□ 0.87
BRCC3-202ENST00000340647 UBXN2AP68543 259 aa20.46■□□□□ 0.87
BRCC3-202ENST00000340647 GPR142Q7Z601 462 aa20.46■□□□□ 0.87
BRCC3-202ENST00000340647 SMC5Q8IY18 1101 aa20.46■□□□□ 0.87
BRCC3-202ENST00000340647 U2AF1L4Q8WU68 220 aaKnown RBP20.46■□□□□ 0.87
BRCC3-202ENST00000340647 ARPP21Q9UBL0 812 aaPredicted RBP20.46■□□□□ 0.87
BRCC3-202ENST00000340647 RANBP2P49792 3224 aaKnown RBP20.46■□□□□ 0.87
BRCC3-202ENST00000340647 ERC2O15083 957 aa20.45■□□□□ 0.86
BRCC3-202ENST00000340647 SGPL1O95470 568 aa20.45■□□□□ 0.86
BRCC3-202ENST00000340647 EEF2P13639 858 aaKnown RBP20.45■□□□□ 0.86
BRCC3-202ENST00000340647 CYP2B6P20813 491 aa20.45■□□□□ 0.86
BRCC3-202ENST00000340647 ICA1Q05084 483 aa20.45■□□□□ 0.86
BRCC3-202ENST00000340647 GTF3C2Q8WUA4 911 aaPredicted RBP20.45■□□□□ 0.86
BRCC3-202ENST00000340647 VCPKMTQ9H867 229 aa20.45■□□□□ 0.86
BRCC3-202ENST00000340647 FRMPD3Q5JV73 1810 aa20.45■□□□□ 0.86
BRCC3-202ENST00000340647 PATL2C9JE40 543 aaKnown RBP20.44■□□□□ 0.86
BRCC3-202ENST00000340647 MAPK4P31152 587 aa20.44■□□□□ 0.86
BRCC3-202ENST00000340647 CCL14Q16627 93 aa20.44■□□□□ 0.86
BRCC3-202ENST00000340647 MAP3K21Q5TCX8 1036 aa20.44■□□□□ 0.86
BRCC3-202ENST00000340647 IFNL3Q8IZI9 196 aa20.44■□□□□ 0.86
BRCC3-202ENST00000340647 SPICE1Q8N0Z3 855 aa20.44■□□□□ 0.86
BRCC3-202ENST00000340647 STK11IPQ8N1F8 1099 aa20.44■□□□□ 0.86
BRCC3-202ENST00000340647 CRISPLD2Q9H0B8 497 aa20.44■□□□□ 0.86
BRCC3-202ENST00000340647 IGKV6D-41A0A0C4DH26 115 aa20.43■□□□□ 0.86
BRCC3-202ENST00000340647 MINDY4BA8MYZ0 360 aa20.43■□□□□ 0.86
BRCC3-202ENST00000340647 IGHA2P01877 340 aa20.43■□□□□ 0.86
BRCC3-202ENST00000340647 HMGCRP04035 888 aa20.43■□□□□ 0.86
BRCC3-202ENST00000340647 XRCC5P13010 732 aaKnown RBP20.43■□□□□ 0.86
BRCC3-202ENST00000340647 CCDC129Q6ZRS4 1044 aa20.43■□□□□ 0.86
BRCC3-202ENST00000340647 DEFB118Q96PH6 123 aa20.43■□□□□ 0.86
BRCC3-202ENST00000340647 FSD1Q9BTV5 496 aa20.43■□□□□ 0.86
BRCC3-202ENST00000340647 TACC3Q9Y6A5 838 aa20.43■□□□□ 0.86
BRCC3-202ENST00000340647 ZNF236Q9UL36 1845 aa20.43■□□□□ 0.86
BRCC3-202ENST00000340647 TRIOBPQ9H2D6 2365 aa20.42■□□□□ 0.86
BRCC3-202ENST00000340647 H0YGN5 161 aa20.42■□□□□ 0.86
BRCC3-202ENST00000340647 MNX1P50219 401 aaPredicted RBP20.42■□□□□ 0.86
BRCC3-202ENST00000340647 COG2Q14746 738 aa20.42■□□□□ 0.86
BRCC3-202ENST00000340647 PLEKHH3Q7Z736 793 aa20.42■□□□□ 0.86
BRCC3-202ENST00000340647 NUDT12Q9BQG2 462 aa20.42■□□□□ 0.86
BRCC3-202ENST00000340647 KANSL2Q9H9L4 492 aa20.42■□□□□ 0.86
BRCC3-202ENST00000340647 FLRT1Q9NZU1 646 aa20.42■□□□□ 0.86
BRCC3-202ENST00000340647 DSG3P32926 999 aa20.41■□□□□ 0.86
BRCC3-202ENST00000340647 NKX2-3Q8TAU0 364 aa20.41■□□□□ 0.86
BRCC3-202ENST00000340647 LPAR1Q92633 364 aa20.41■□□□□ 0.86
BRCC3-202ENST00000340647 DDRGK1Q96HY6 314 aa20.41■□□□□ 0.86
BRCC3-202ENST00000340647 MOV10L1Q9BXT6 1211 aaKnown RBP20.41■□□□□ 0.86
BRCC3-202ENST00000340647 LNPKQ9C0E8 428 aa20.41■□□□□ 0.86
BRCC3-202ENST00000340647 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.41■□□□□ 0.86
BRCC3-202ENST00000340647 ARHGEF10LQ9HCE6 1279 aa20.41■□□□□ 0.86
BRCC3-202ENST00000340647 FBXO28Q9NVF7 368 aa20.41■□□□□ 0.86
BRCC3-202ENST00000340647 ADAMTS5Q9UNA0 930 aa20.41■□□□□ 0.86
BRCC3-202ENST00000340647 PRDM1O75626 825 aa20.4■□□□□ 0.86
BRCC3-202ENST00000340647 GNAT2P19087 354 aa20.4■□□□□ 0.86
BRCC3-202ENST00000340647 PTPREP23469 700 aa20.4■□□□□ 0.86
BRCC3-202ENST00000340647 AAMPQ13685 434 aa20.4■□□□□ 0.86
BRCC3-202ENST00000340647 VPS53Q5VIR6 699 aa20.4■□□□□ 0.86
BRCC3-202ENST00000340647 AMOTL1Q8IY63 956 aa20.4■□□□□ 0.86
BRCC3-202ENST00000340647 SOCS4Q8WXH5 440 aa20.4■□□□□ 0.86
BRCC3-202ENST00000340647 ATG4CQ96DT6 458 aa20.4■□□□□ 0.86
BRCC3-202ENST00000340647 RPTORQ8N122 1335 aa20.39■□□□□ 0.85
BRCC3-202ENST00000340647 CACNB2Q08289 660 aaPredicted RBP20.39■□□□□ 0.85
BRCC3-202ENST00000340647 GRB14Q14449 540 aa20.39■□□□□ 0.85
BRCC3-202ENST00000340647 NPLOC4Q8TAT6 608 aa20.39■□□□□ 0.85
BRCC3-202ENST00000340647 TANGO6Q9C0B7 1094 aa20.39■□□□□ 0.85
BRCC3-202ENST00000340647 INCENPQ9NQS7 918 aa20.39■□□□□ 0.85
BRCC3-202ENST00000340647 HOXC10Q9NYD6 342 aa20.39■□□□□ 0.85
BRCC3-202ENST00000340647 PLXNA1Q9UIW2 1896 aa20.39■□□□□ 0.85
BRCC3-202ENST00000340647 WDR46O15213 610 aaKnown RBP20.38■□□□□ 0.85
BRCC3-202ENST00000340647 TDO2P48775 406 aa20.38■□□□□ 0.85
BRCC3-202ENST00000340647 MAP2K5Q13163 448 aa20.38■□□□□ 0.85
BRCC3-202ENST00000340647 B4GALNT3Q6L9W6 998 aa20.38■□□□□ 0.85
BRCC3-202ENST00000340647 REPS2Q8NFH8 660 aa20.38■□□□□ 0.85
BRCC3-202ENST00000340647 DIS3LQ8TF46 1054 aaKnown RBP20.38■□□□□ 0.85
BRCC3-202ENST00000340647 EVI5LQ96CN4 794 aa20.38■□□□□ 0.85
BRCC3-202ENST00000340647 FAM227BQ96M60 508 aa20.38■□□□□ 0.85
BRCC3-202ENST00000340647 SPATC1LQ9H0A9 340 aa20.38■□□□□ 0.85
BRCC3-202ENST00000340647 SUPT16HQ9Y5B9 1047 aaKnown RBP20.38■□□□□ 0.85
BRCC3-202ENST00000340647 A0A0D9SFI3 127 aa20.37■□□□□ 0.85
BRCC3-202ENST00000340647 SLC15A5A6NIM6 579 aa20.37■□□□□ 0.85
BRCC3-202ENST00000340647 FLOT1O75955 427 aa20.37■□□□□ 0.85
BRCC3-202ENST00000340647 APPP05067 770 aa20.37■□□□□ 0.85
BRCC3-202ENST00000340647 HOXC6P09630 235 aa20.37■□□□□ 0.85
BRCC3-202ENST00000340647 PRKAR2AP13861 404 aaKnown RBP20.37■□□□□ 0.85
BRCC3-202ENST00000340647 RGS2P41220 211 aa20.37■□□□□ 0.85
BRCC3-202ENST00000340647 ATP2B2Q01814 1243 aa20.37■□□□□ 0.85
BRCC3-202ENST00000340647 NUCB1Q02818 461 aa20.37■□□□□ 0.85
BRCC3-202ENST00000340647 TMEM132BQ14DG7 1078 aa20.37■□□□□ 0.85
BRCC3-202ENST00000340647 PLEKHM2Q8IWE5 1019 aa20.37■□□□□ 0.85
BRCC3-202ENST00000340647 APBA2Q99767 749 aa20.37■□□□□ 0.85
BRCC3-202ENST00000340647 NYAP2Q9P242 653 aa20.37■□□□□ 0.85
BRCC3-202ENST00000340647 PLIN4Q96Q06 1357 aa20.36■□□□□ 0.85
BRCC3-202ENST00000340647 SMCHD1A6NHR9 2005 aa20.36■□□□□ 0.85
BRCC3-202ENST00000340647 FARP2O94887 1054 aaPredicted RBP20.36■□□□□ 0.85
BRCC3-202ENST00000340647 CCND3P30281 292 aaPredicted RBP20.36■□□□□ 0.85
BRCC3-202ENST00000340647 CCNA1P78396 465 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms