RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 RANBP6O60518 1105 aaKnown RBP22.73■■□□□ 1.23
SYNE4-202ENST00000340477 PSMC4P43686 418 aa22.73■■□□□ 1.23
SYNE4-202ENST00000340477 PRMT2P55345 433 aa22.73■■□□□ 1.23
SYNE4-202ENST00000340477 HAND2P61296 217 aa22.73■■□□□ 1.23
SYNE4-202ENST00000340477 TFAP4Q01664 338 aa22.73■■□□□ 1.23
SYNE4-202ENST00000340477 BMP2KLQ5H9B9 411 aa22.73■■□□□ 1.23
SYNE4-202ENST00000340477 NEDD1Q8NHV4 660 aa22.73■■□□□ 1.23
SYNE4-202ENST00000340477 P2RX7Q99572 595 aaKnown RBP22.73■■□□□ 1.23
SYNE4-202ENST00000340477 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.73■■□□□ 1.23
SYNE4-202ENST00000340477 ZSWIM8A7E2V4 1837 aa22.73■■□□□ 1.23
SYNE4-202ENST00000340477 WDR46O15213 610 aaKnown RBP22.72■■□□□ 1.23
SYNE4-202ENST00000340477 ORC4O43929 436 aa22.72■■□□□ 1.23
SYNE4-202ENST00000340477 ECM2O94769 699 aaPredicted RBP22.72■■□□□ 1.23
SYNE4-202ENST00000340477 TTLL1O95922 423 aa22.72■■□□□ 1.23
SYNE4-202ENST00000340477 IMMTQ16891 758 aaKnown RBP22.72■■□□□ 1.23
SYNE4-202ENST00000340477 FAM47AQ5JRC9 791 aa22.72■■□□□ 1.23
SYNE4-202ENST00000340477 RRP12Q5JTH9 1297 aaKnown RBP22.72■■□□□ 1.23
SYNE4-202ENST00000340477 CATSPERGQ6ZRH7 1159 aa22.72■■□□□ 1.23
SYNE4-202ENST00000340477 MFSD6Q6ZSS7 791 aa22.72■■□□□ 1.23
SYNE4-202ENST00000340477 CASC1Q6TDU7 716 aa22.71■■□□□ 1.23
SYNE4-202ENST00000340477 CCAR1Q8IX12 1150 aaKnown RBP22.71■■□□□ 1.23
SYNE4-202ENST00000340477 SPICE1Q8N0Z3 855 aa22.71■■□□□ 1.23
SYNE4-202ENST00000340477 CEP95Q96GE4 821 aa22.71■■□□□ 1.23
SYNE4-202ENST00000340477 PAGR1Q9BTK6 254 aa22.71■■□□□ 1.23
SYNE4-202ENST00000340477 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.71■■□□□ 1.23
SYNE4-202ENST00000340477 ARHGAP39Q9C0H5 1083 aa22.71■■□□□ 1.23
SYNE4-202ENST00000340477 MTMR4Q9NYA4 1195 aa22.71■■□□□ 1.23
SYNE4-202ENST00000340477 SYNPO2Q9UMS6 1093 aa22.71■■□□□ 1.23
SYNE4-202ENST00000340477 PTPN22Q9Y2R2 807 aa22.71■■□□□ 1.23
SYNE4-202ENST00000340477 IGKV6D-41A0A0C4DH26 115 aa22.7■■□□□ 1.22
SYNE4-202ENST00000340477 TNPO2O14787 897 aaKnown RBP22.7■■□□□ 1.22
SYNE4-202ENST00000340477 CAPN15O75808 1086 aa22.7■■□□□ 1.22
SYNE4-202ENST00000340477 NT5C2P49902 561 aa22.7■■□□□ 1.22
SYNE4-202ENST00000340477 AKNAD1Q5T1N1 836 aa22.7■■□□□ 1.22
SYNE4-202ENST00000340477 IFFO2Q5TF58 517 aa22.7■■□□□ 1.22
SYNE4-202ENST00000340477 SIAH1Q8IUQ4 282 aa22.7■■□□□ 1.22
SYNE4-202ENST00000340477 GPRC5AQ8NFJ5 357 aa22.7■■□□□ 1.22
SYNE4-202ENST00000340477 STAG1Q8WVM7 1258 aa22.7■■□□□ 1.22
SYNE4-202ENST00000340477 TRIM47Q96LD4 638 aa22.7■■□□□ 1.22
SYNE4-202ENST00000340477 MORF4L1Q9UBU8 362 aa22.7■■□□□ 1.22
SYNE4-202ENST00000340477 CLIP2Q9UDT6 1046 aa22.7■■□□□ 1.22
SYNE4-202ENST00000340477 HPS5Q9UPZ3 1129 aa22.7■■□□□ 1.22
SYNE4-202ENST00000340477 FLOT1O75955 427 aa22.69■■□□□ 1.22
SYNE4-202ENST00000340477 COG2Q14746 738 aa22.69■■□□□ 1.22
SYNE4-202ENST00000340477 KIAA1211Q6ZU35 1233 aa22.69■■□□□ 1.22
SYNE4-202ENST00000340477 COA7Q96BR5 231 aa22.69■■□□□ 1.22
SYNE4-202ENST00000340477 CWC22Q9HCG8 908 aaKnown RBP22.69■■□□□ 1.22
SYNE4-202ENST00000340477 HOXC10Q9NYD6 342 aa22.69■■□□□ 1.22
SYNE4-202ENST00000340477 STX8Q9UNK0 236 aa22.69■■□□□ 1.22
SYNE4-202ENST00000340477 MYPNQ86TC9 1320 aa22.68■■□□□ 1.22
SYNE4-202ENST00000340477 CCDC85CA6NKD9 419 aa22.68■■□□□ 1.22
SYNE4-202ENST00000340477 FGRP09769 529 aa22.68■■□□□ 1.22
SYNE4-202ENST00000340477 CCNA1P78396 465 aa22.68■■□□□ 1.22
SYNE4-202ENST00000340477 ESR2Q92731 530 aa22.68■■□□□ 1.22
SYNE4-202ENST00000340477 SRRDQ9UH36 339 aa22.68■■□□□ 1.22
SYNE4-202ENST00000340477 RABGAP1Q9Y3P9 1069 aa22.68■■□□□ 1.22
SYNE4-202ENST00000340477 SGSM2O43147 1006 aa22.67■■□□□ 1.22
SYNE4-202ENST00000340477 ERVK-9P63128 1117 aa22.67■■□□□ 1.22
SYNE4-202ENST00000340477 ERVK-24P63145 666 aa22.67■■□□□ 1.22
SYNE4-202ENST00000340477 SKAP1Q86WV1 359 aa22.67■■□□□ 1.22
SYNE4-202ENST00000340477 RAET1EQ8TD07 263 aa22.67■■□□□ 1.22
SYNE4-202ENST00000340477 U3KPZ7 1027 aaPredicted RBP22.67■■□□□ 1.22
SYNE4-202ENST00000340477 SPDYE16A6NNV3 312 aaPredicted RBP22.66■■□□□ 1.22
SYNE4-202ENST00000340477 SAMD1Q6SPF0 538 aaPredicted RBP22.66■■□□□ 1.22
SYNE4-202ENST00000340477 LBX2Q6XYB7 198 aa22.66■■□□□ 1.22
SYNE4-202ENST00000340477 TBC1D10CQ8IV04 446 aa22.66■■□□□ 1.22
SYNE4-202ENST00000340477 LRRC47Q8N1G4 583 aaKnown RBP22.66■■□□□ 1.22
SYNE4-202ENST00000340477 MB21D1Q8N884 522 aa22.66■■□□□ 1.22
SYNE4-202ENST00000340477 MKL1Q969V6 931 aa22.66■■□□□ 1.22
SYNE4-202ENST00000340477 IL25Q9H293 177 aa22.66■■□□□ 1.22
SYNE4-202ENST00000340477 INCENPQ9NQS7 918 aa22.66■■□□□ 1.22
SYNE4-202ENST00000340477 ISY1Q9ULR0 285 aaKnown RBP22.66■■□□□ 1.22
SYNE4-202ENST00000340477 PTCH2Q9Y6C5 1203 aa22.66■■□□□ 1.22
SYNE4-202ENST00000340477 F5H6K3 240 aa22.65■■□□□ 1.22
SYNE4-202ENST00000340477 MAPK4P31152 587 aa22.65■■□□□ 1.22
SYNE4-202ENST00000340477 CAP1Q01518 475 aa22.65■■□□□ 1.22
SYNE4-202ENST00000340477 KLRC3Q07444 240 aa22.65■■□□□ 1.22
SYNE4-202ENST00000340477 SLC9C1Q4G0N8 1177 aa22.65■■□□□ 1.22
SYNE4-202ENST00000340477 KIAA1755Q5JYT7 1200 aa22.65■■□□□ 1.22
SYNE4-202ENST00000340477 FAM83BQ5T0W9 1011 aa22.65■■□□□ 1.22
SYNE4-202ENST00000340477 NBPF11Q86T75 865 aa22.65■■□□□ 1.22
SYNE4-202ENST00000340477 GMCL1P1Q8NEA9 526 aa22.65■■□□□ 1.22
SYNE4-202ENST00000340477 CNNM2Q9H8M5 875 aa22.65■■□□□ 1.22
SYNE4-202ENST00000340477 RBPJLQ9UBG7 517 aa22.65■■□□□ 1.22
SYNE4-202ENST00000340477 PARP14Q460N5 1801 aa22.65■■□□□ 1.22
SYNE4-202ENST00000340477 A0A0G2JMZ2 1700 aa22.65■■□□□ 1.22
SYNE4-202ENST00000340477 NDUFB10O96000 172 aa22.64■■□□□ 1.21
SYNE4-202ENST00000340477 CTGFP29279 349 aa22.64■■□□□ 1.21
SYNE4-202ENST00000340477 KRT23Q9C075 422 aa22.64■■□□□ 1.21
SYNE4-202ENST00000340477 NBPF3Q9H094 633 aa22.64■■□□□ 1.21
SYNE4-202ENST00000340477 TXNRD2Q9NNW7 524 aa22.64■■□□□ 1.21
SYNE4-202ENST00000340477 NEDD4P46934 1319 aa22.63■■□□□ 1.21
SYNE4-202ENST00000340477 CDC45O75419 566 aa22.63■■□□□ 1.21
SYNE4-202ENST00000340477 DSG3P32926 999 aa22.63■■□□□ 1.21
SYNE4-202ENST00000340477 PRKCZQ05513 592 aa22.63■■□□□ 1.21
SYNE4-202ENST00000340477 TRDNQ13061 729 aa22.63■■□□□ 1.21
SYNE4-202ENST00000340477 CCDC178Q5BJE1 867 aa22.63■■□□□ 1.21
SYNE4-202ENST00000340477 SLFN13Q68D06 897 aa22.63■■□□□ 1.21
SYNE4-202ENST00000340477 IQCA1Q86XH1 822 aa22.63■■□□□ 1.21
SYNE4-202ENST00000340477 WDR78Q5VTH9 848 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms