RNA–Protein interactions for RNA: ENST00000338372.6

VSTM1-201, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSTM1, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-201ENST00000338372 PCDH10Q9P2E7 1040 aa20.57■□□□□ 0.88
VSTM1-201ENST00000338372 ZNF236Q9UL36 1845 aa20.56■□□□□ 0.88
VSTM1-201ENST00000338372 LHX8Q68G74 356 aa20.56■□□□□ 0.88
VSTM1-201ENST00000338372 ANKLE1Q8NAG6 615 aa20.56■□□□□ 0.88
VSTM1-201ENST00000338372 HTATIP2Q9BUP3 242 aa20.56■□□□□ 0.88
VSTM1-201ENST00000338372 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.56■□□□□ 0.88
VSTM1-201ENST00000338372 FLRT1Q9NZU1 646 aa20.56■□□□□ 0.88
VSTM1-201ENST00000338372 TMX2Q9Y320 296 aa20.56■□□□□ 0.88
VSTM1-201ENST00000338372 PRKAR2AP13861 404 aaKnown RBP20.55■□□□□ 0.88
VSTM1-201ENST00000338372 PTPREP23469 700 aa20.55■□□□□ 0.88
VSTM1-201ENST00000338372 KBTBD3Q8NAB2 608 aa20.55■□□□□ 0.88
VSTM1-201ENST00000338372 OSBP2Q969R2 916 aa20.55■□□□□ 0.88
VSTM1-201ENST00000338372 GSG1L2A8MUP6 293 aa20.54■□□□□ 0.88
VSTM1-201ENST00000338372 HOXC6P09630 235 aa20.54■□□□□ 0.88
VSTM1-201ENST00000338372 RGS2P41220 211 aa20.54■□□□□ 0.88
VSTM1-201ENST00000338372 MAP2K5Q13163 448 aa20.54■□□□□ 0.88
VSTM1-201ENST00000338372 COG2Q14746 738 aa20.54■□□□□ 0.88
VSTM1-201ENST00000338372 TSHZ3Q63HK5 1081 aa20.54■□□□□ 0.88
VSTM1-201ENST00000338372 TRMT44Q8IYL2 757 aaKnown RBP20.54■□□□□ 0.88
VSTM1-201ENST00000338372 SLC4A4Q9Y6R1 1079 aa20.54■□□□□ 0.88
VSTM1-201ENST00000338372 SLC15A5A6NIM6 579 aa20.53■□□□□ 0.88
VSTM1-201ENST00000338372 MPHOSPH10O00566 681 aaKnown RBP20.53■□□□□ 0.88
VSTM1-201ENST00000338372 CCND3P30281 292 aaPredicted RBP20.53■□□□□ 0.88
VSTM1-201ENST00000338372 GRB14Q14449 540 aa20.53■□□□□ 0.88
VSTM1-201ENST00000338372 SBK1Q52WX2 424 aa20.53■□□□□ 0.88
VSTM1-201ENST00000338372 CHRDL2Q6WN34 429 aa20.53■□□□□ 0.88
VSTM1-201ENST00000338372 NPLOC4Q8TAT6 608 aa20.53■□□□□ 0.88
VSTM1-201ENST00000338372 CCDC17Q96LX7 622 aa20.53■□□□□ 0.88
VSTM1-201ENST00000338372 APBA2Q99767 749 aa20.53■□□□□ 0.88
VSTM1-201ENST00000338372 RBM27Q9P2N5 1060 aaKnown RBP20.53■□□□□ 0.88
VSTM1-201ENST00000338372 ADAMTS5Q9UNA0 930 aa20.53■□□□□ 0.88
VSTM1-201ENST00000338372 DNAH12Q6ZR08 3092 aa20.52■□□□□ 0.88
VSTM1-201ENST00000338372 DSG3P32926 999 aa20.52■□□□□ 0.88
VSTM1-201ENST00000338372 PI4K2BQ8TCG2 481 aa20.52■□□□□ 0.88
VSTM1-201ENST00000338372 MOV10L1Q9BXT6 1211 aaKnown RBP20.52■□□□□ 0.88
VSTM1-201ENST00000338372 VCPKMTQ9H867 229 aa20.52■□□□□ 0.88
VSTM1-201ENST00000338372 HOXC10Q9NYD6 342 aa20.52■□□□□ 0.88
VSTM1-201ENST00000338372 SALL3Q9BXA9 1300 aa20.52■□□□□ 0.87
VSTM1-201ENST00000338372 COL6A1P12109 1028 aa20.51■□□□□ 0.87
VSTM1-201ENST00000338372 ZKSCAN1P17029 563 aaPredicted RBP20.51■□□□□ 0.87
VSTM1-201ENST00000338372 CCNA1P78396 465 aa20.51■□□□□ 0.87
VSTM1-201ENST00000338372 ZSCAN25Q6NSZ9 544 aa20.51■□□□□ 0.87
VSTM1-201ENST00000338372 NECAB2Q7Z6G3 386 aa20.51■□□□□ 0.87
VSTM1-201ENST00000338372 OTUD7AQ8TE49 926 aaPredicted RBP20.51■□□□□ 0.87
VSTM1-201ENST00000338372 LPAR1Q92633 364 aa20.51■□□□□ 0.87
VSTM1-201ENST00000338372 PFASO15067 1338 aa20.51■□□□□ 0.87
VSTM1-201ENST00000338372 ICA1Q05084 483 aa20.5■□□□□ 0.87
VSTM1-201ENST00000338372 GIMAP6Q6P9H5 292 aa20.5■□□□□ 0.87
VSTM1-201ENST00000338372 APPBP2Q92624 585 aa20.5■□□□□ 0.87
VSTM1-201ENST00000338372 EPB41L4AQ9HCS5 686 aaPredicted RBP20.5■□□□□ 0.87
VSTM1-201ENST00000338372 ROBO3Q96MS0 1386 aa20.49■□□□□ 0.87
VSTM1-201ENST00000338372 RNF113AO15541 343 aaKnown RBP20.49■□□□□ 0.87
VSTM1-201ENST00000338372 EEF2P13639 858 aaKnown RBP20.49■□□□□ 0.87
VSTM1-201ENST00000338372 RASA1P20936 1047 aa20.49■□□□□ 0.87
VSTM1-201ENST00000338372 SHCBP1Q8NEM2 672 aa20.49■□□□□ 0.87
VSTM1-201ENST00000338372 TRPV1Q8NER1 839 aa20.49■□□□□ 0.87
VSTM1-201ENST00000338372 SPATC1LQ9H0A9 340 aa20.49■□□□□ 0.87
VSTM1-201ENST00000338372 NR2E3Q9Y5X4 410 aa20.49■□□□□ 0.87
VSTM1-201ENST00000338372 SMCHD1A6NHR9 2005 aa20.49■□□□□ 0.87
VSTM1-201ENST00000338372 MYH4Q9Y623 1939 aa20.49■□□□□ 0.87
VSTM1-201ENST00000338372 M0R2C6 588 aa20.48■□□□□ 0.87
VSTM1-201ENST00000338372 COBLO75128 1261 aa20.48■□□□□ 0.87
VSTM1-201ENST00000338372 SPICE1Q8N0Z3 855 aa20.48■□□□□ 0.87
VSTM1-201ENST00000338372 ATG4CQ96DT6 458 aa20.48■□□□□ 0.87
VSTM1-201ENST00000338372 NBPF3Q9H094 633 aa20.48■□□□□ 0.87
VSTM1-201ENST00000338372 ARPP21Q9UBL0 812 aaPredicted RBP20.48■□□□□ 0.87
VSTM1-201ENST00000338372 IGKV6D-41A0A0C4DH26 115 aa20.47■□□□□ 0.87
VSTM1-201ENST00000338372 WDR46O15213 610 aaKnown RBP20.47■□□□□ 0.87
VSTM1-201ENST00000338372 EVI5O60447 810 aa20.47■□□□□ 0.87
VSTM1-201ENST00000338372 CCAR1Q8IX12 1150 aaKnown RBP20.47■□□□□ 0.87
VSTM1-201ENST00000338372 REPS2Q8NFH8 660 aa20.47■□□□□ 0.87
VSTM1-201ENST00000338372 TANGO6Q9C0B7 1094 aa20.47■□□□□ 0.87
VSTM1-201ENST00000338372 KANSL2Q9H9L4 492 aa20.47■□□□□ 0.87
VSTM1-201ENST00000338372 ARHGEF10LQ9HCE6 1279 aa20.47■□□□□ 0.87
VSTM1-201ENST00000338372 PLXNA1Q9UIW2 1896 aa20.47■□□□□ 0.87
VSTM1-201ENST00000338372 TTC41PQ6P2S7 1318 aa20.47■□□□□ 0.87
VSTM1-201ENST00000338372 LAMA3Q16787 3333 aa20.47■□□□□ 0.87
VSTM1-201ENST00000338372 GPAA1O43292 621 aa20.46■□□□□ 0.87
VSTM1-201ENST00000338372 STRNO43815 780 aa20.46■□□□□ 0.87
VSTM1-201ENST00000338372 GLRX3O76003 335 aaKnown RBP20.46■□□□□ 0.87
VSTM1-201ENST00000338372 ERCC3P19447 782 aa20.46■□□□□ 0.87
VSTM1-201ENST00000338372 RRP1P56182 461 aaKnown RBP20.46■□□□□ 0.87
VSTM1-201ENST00000338372 TMEM132BQ14DG7 1078 aa20.46■□□□□ 0.87
VSTM1-201ENST00000338372 MB21D1Q8N884 522 aa20.46■□□□□ 0.87
VSTM1-201ENST00000338372 SEC62Q99442 399 aaKnown RBP20.46■□□□□ 0.87
VSTM1-201ENST00000338372 C11orf49Q9H6J7 331 aa20.46■□□□□ 0.87
VSTM1-201ENST00000338372 FBXO28Q9NVF7 368 aa20.46■□□□□ 0.87
VSTM1-201ENST00000338372 FOXP2O15409 715 aa20.45■□□□□ 0.86
VSTM1-201ENST00000338372 ADORA2AP29274 412 aa20.45■□□□□ 0.86
VSTM1-201ENST00000338372 GDF15Q99988 308 aa20.45■□□□□ 0.86
VSTM1-201ENST00000338372 FLOT1O75955 427 aa20.44■□□□□ 0.86
VSTM1-201ENST00000338372 ZFYP08048 801 aaPredicted RBP20.44■□□□□ 0.86
VSTM1-201ENST00000338372 CYBAP13498 195 aa20.44■□□□□ 0.86
VSTM1-201ENST00000338372 CYP2C19P33261 490 aa20.44■□□□□ 0.86
VSTM1-201ENST00000338372 WDR78Q5VTH9 848 aa20.44■□□□□ 0.86
VSTM1-201ENST00000338372 OLFML2BQ68BL8 750 aa20.44■□□□□ 0.86
VSTM1-201ENST00000338372 SH2D4AQ9H788 454 aa20.44■□□□□ 0.86
VSTM1-201ENST00000338372 NYAP2Q9P242 653 aa20.44■□□□□ 0.86
VSTM1-201ENST00000338372 ZMYM1Q5SVZ6 1142 aa20.43■□□□□ 0.86
VSTM1-201ENST00000338372 AMOTL1Q8IY63 956 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms