RNA–Protein interactions for RNA: ENST00000336937.8

ATF3-201, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-201ENST00000336937 NEDD1Q8NHV4 660 aa8.21□□□□□ -1.1
ATF3-201ENST00000336937 CD99L2Q8TCZ2 262 aa8.21□□□□□ -1.1
ATF3-201ENST00000336937 PXYLP1Q8TE99 480 aa8.21□□□□□ -1.1
ATF3-201ENST00000336937 ESR2Q92731 530 aa8.21□□□□□ -1.1
ATF3-201ENST00000336937 MKL1Q969V6 931 aa8.21□□□□□ -1.1
ATF3-201ENST00000336937 ABHD8Q96I13 439 aa8.21□□□□□ -1.1
ATF3-201ENST00000336937 FAM227BQ96M60 508 aa8.21□□□□□ -1.1
ATF3-201ENST00000336937 TTC14Q96N46 770 aa8.21□□□□□ -1.1
ATF3-201ENST00000336937 TCP11L1Q9NUJ3 509 aa8.21□□□□□ -1.1
ATF3-201ENST00000336937 PTPN22Q9Y2R2 807 aa8.21□□□□□ -1.1
ATF3-201ENST00000336937 IGKV6D-41A0A0C4DH26 115 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 EPB41L2O43491 1005 aaKnown RBP8.2□□□□□ -1.1
ATF3-201ENST00000336937 FMNL1O95466 1100 aaPredicted RBP8.2□□□□□ -1.1
ATF3-201ENST00000336937 SLC25A27O95847 323 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 FGAP02671 866 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 CYP2C8P10632 490 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 CYP2D6P10635 497 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 XRCC5P13010 732 aaKnown RBP8.2□□□□□ -1.1
ATF3-201ENST00000336937 AKR1B1P15121 316 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 GSPT1P15170 499 aaKnown RBP8.2□□□□□ -1.1
ATF3-201ENST00000336937 GUCY1A2P33402 732 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 PSMC4P43686 418 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 NOVP48745 357 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 OAZ1P54368 228 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 ERVK-9P63128 1117 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 ERVK-24P63145 666 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 UBXN2AP68543 259 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 IRX6P78412 446 aaPredicted RBP8.2□□□□□ -1.1
ATF3-201ENST00000336937 TRDNQ13061 729 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 SLC9C1Q4G0N8 1177 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 AKNAD1Q5T1N1 836 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 MFSD6Q6ZSS7 791 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 KIAA1211Q6ZU35 1233 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 SLC44A5Q8NCS7 719 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 SHCBP1Q8NEM2 672 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 NKX2-3Q8TAU0 364 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 RAET1EQ8TD07 263 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 ARMC5Q96C12 935 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 GMCL1Q96IK5 515 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 TRIM47Q96LD4 638 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 SEC62Q99442 399 aaKnown RBP8.2□□□□□ -1.1
ATF3-201ENST00000336937 MTA3Q9BTC8 594 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 KRT23Q9C075 422 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 TANGO6Q9C0B7 1094 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 MAF1Q9H063 256 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 RPAP3Q9H6T3 665 aaPredicted RBP8.2□□□□□ -1.1
ATF3-201ENST00000336937 EMILIN3Q9NT22 766 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 SLC5A4Q9NY91 659 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 MTMR4Q9NYA4 1195 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 SRRDQ9UH36 339 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 HPS5Q9UPZ3 1129 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.2□□□□□ -1.1
ATF3-201ENST00000336937 U3KPZ7 1027 aaPredicted RBP8.2□□□□□ -1.1
ATF3-201ENST00000336937 CENPFP49454 3210 aa8.2□□□□□ -1.1
ATF3-201ENST00000336937 PLXNB2O15031 1838 aa8.19□□□□□ -1.1
ATF3-201ENST00000336937 RLFQ13129 1914 aa8.19□□□□□ -1.1
ATF3-201ENST00000336937 FOXP2O15409 715 aa8.19□□□□□ -1.1
ATF3-201ENST00000336937 STRNO43815 780 aa8.19□□□□□ -1.1
ATF3-201ENST00000336937 PLA2G6O60733 806 aa8.19□□□□□ -1.1
ATF3-201ENST00000336937 EEF2P13639 858 aaKnown RBP8.19□□□□□ -1.1
ATF3-201ENST00000336937 PDE4AP27815 886 aa8.19□□□□□ -1.1
ATF3-201ENST00000336937 STAT2P52630 851 aa8.19□□□□□ -1.1
ATF3-201ENST00000336937 SART3Q15020 963 aaKnown RBP8.19□□□□□ -1.1
ATF3-201ENST00000336937 SLFNL1Q499Z3 407 aa8.19□□□□□ -1.1
ATF3-201ENST00000336937 RNF20Q5VTR2 975 aa8.19□□□□□ -1.1
ATF3-201ENST00000336937 ZNF589Q86UQ0 364 aaPredicted RBP8.19□□□□□ -1.1
ATF3-201ENST00000336937 FAM160B2Q86V87 743 aa8.19□□□□□ -1.1
ATF3-201ENST00000336937 ABRAQ8N0Z2 381 aa8.19□□□□□ -1.1
ATF3-201ENST00000336937 ANKRD13CQ8N6S4 541 aa8.19□□□□□ -1.1
ATF3-201ENST00000336937 DYNLL2Q96FJ2 89 aa8.19□□□□□ -1.1
ATF3-201ENST00000336937 CEP95Q96GE4 821 aa8.19□□□□□ -1.1
ATF3-201ENST00000336937 MROH8Q9H579 483 aa8.19□□□□□ -1.1
ATF3-201ENST00000336937 CWC22Q9HCG8 908 aaKnown RBP8.19□□□□□ -1.1
ATF3-201ENST00000336937 CPA4Q9UI42 421 aa8.19□□□□□ -1.1
ATF3-201ENST00000336937 FEM1BQ9UK73 627 aa8.19□□□□□ -1.1
ATF3-201ENST00000336937 IVNS1ABPQ9Y6Y0 642 aa8.19□□□□□ -1.1
ATF3-201ENST00000336937 SPDYE16A6NNV3 312 aaPredicted RBP8.18□□□□□ -1.1
ATF3-201ENST00000336937 ATP2A1O14983 1001 aa8.18□□□□□ -1.1
ATF3-201ENST00000336937 SGSM2O43147 1006 aa8.18□□□□□ -1.1
ATF3-201ENST00000336937 FLOT1O75955 427 aa8.18□□□□□ -1.1
ATF3-201ENST00000336937 CHGBP05060 677 aa8.18□□□□□ -1.1
ATF3-201ENST00000336937 CHMLP26374 656 aa8.18□□□□□ -1.1
ATF3-201ENST00000336937 TFAP4Q01664 338 aa8.18□□□□□ -1.1
ATF3-201ENST00000336937 ZYXQ15942 572 aaKnown RBP8.18□□□□□ -1.1
ATF3-201ENST00000336937 GPATCH4Q5T3I0 446 aaKnown RBP8.18□□□□□ -1.1
ATF3-201ENST00000336937 CCDC84Q86UT8 332 aaPredicted RBP8.18□□□□□ -1.1
ATF3-201ENST00000336937 DGKHQ86XP1 1220 aa8.18□□□□□ -1.1
ATF3-201ENST00000336937 PRPF38AQ8NAV1 312 aaKnown RBP8.18□□□□□ -1.1
ATF3-201ENST00000336937 CHURC1Q8WUH1 139 aa8.18□□□□□ -1.1
ATF3-201ENST00000336937 DCAF4Q8WV16 495 aa8.18□□□□□ -1.1
ATF3-201ENST00000336937 APBA2Q99767 749 aa8.18□□□□□ -1.1
ATF3-201ENST00000336937 NUDT12Q9BQG2 462 aa8.18□□□□□ -1.1
ATF3-201ENST00000336937 PPP4R2Q9NY27 417 aa8.18□□□□□ -1.1
ATF3-201ENST00000336937 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.18□□□□□ -1.1
ATF3-201ENST00000336937 PPP1R9AQ9ULJ8 1098 aa8.18□□□□□ -1.1
ATF3-201ENST00000336937 STX8Q9UNK0 236 aa8.18□□□□□ -1.1
ATF3-201ENST00000336937 BRCA2P51587 3418 aa8.18□□□□□ -1.1
ATF3-201ENST00000336937 COL11A1P12107 1806 aaPredicted RBP8.17□□□□□ -1.1
ATF3-201ENST00000336937 CYP2D7A0A087X1C5 515 aa8.17□□□□□ -1.1
ATF3-201ENST00000336937 A0A1W2PRG0 241 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms