RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 ERCC3P19447 782 aa17.53■□□□□ 0.4
HDAC5-202ENST00000336057 PTGDRQ13258 359 aa17.53■□□□□ 0.4
HDAC5-202ENST00000336057 FMNL1O95466 1100 aaPredicted RBP17.53■□□□□ 0.4
HDAC5-202ENST00000336057 CALCOCO2Q13137 446 aa17.53■□□□□ 0.4
HDAC5-202ENST00000336057 PNMA1Q8ND90 353 aa17.53■□□□□ 0.4
HDAC5-202ENST00000336057 RASSF4Q9H2L5 321 aa17.53■□□□□ 0.4
HDAC5-202ENST00000336057 A2ML1A8K2U0 1454 aa17.52■□□□□ 0.4
HDAC5-202ENST00000336057 GOLGA6BA6NDN3 693 aa17.52■□□□□ 0.4
HDAC5-202ENST00000336057 SMIM23A6NLE4 172 aa17.52■□□□□ 0.4
HDAC5-202ENST00000336057 DNM2P50570 870 aa17.52■□□□□ 0.4
HDAC5-202ENST00000336057 ZBTB21Q9ULJ3 1066 aa17.52■□□□□ 0.4
HDAC5-202ENST00000336057 ZDHHC9Q9Y397 364 aa17.52■□□□□ 0.4
HDAC5-202ENST00000336057 UBAP1LF5GYI3 381 aa17.52■□□□□ 0.4
HDAC5-202ENST00000336057 PCP11498 1178 aaKnown RBP17.52■□□□□ 0.4
HDAC5-202ENST00000336057 TNFAIP3P21580 790 aa17.52■□□□□ 0.4
HDAC5-202ENST00000336057 GJC1P36383 396 aa17.52■□□□□ 0.4
HDAC5-202ENST00000336057 GSTA5Q7RTV2 222 aa17.52■□□□□ 0.4
HDAC5-202ENST00000336057 PSMB7Q99436 277 aa17.52■□□□□ 0.4
HDAC5-202ENST00000336057 PAIP2Q9BPZ3 127 aaKnown RBP17.52■□□□□ 0.4
HDAC5-202ENST00000336057 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.52■□□□□ 0.4
HDAC5-202ENST00000336057 PUS7LQ9H0K6 701 aaKnown RBP17.52■□□□□ 0.4
HDAC5-202ENST00000336057 ANKARQ7Z5J8 1434 aa17.52■□□□□ 0.4
HDAC5-202ENST00000336057 ALKQ9UM73 1620 aa17.52■□□□□ 0.4
HDAC5-202ENST00000336057 ATP2A1O14983 1001 aa17.52■□□□□ 0.39
HDAC5-202ENST00000336057 SLC1A4P43007 532 aa17.52■□□□□ 0.39
HDAC5-202ENST00000336057 TYW1BQ6NUM6 668 aa17.52■□□□□ 0.39
HDAC5-202ENST00000336057 TCHPQ9BT92 498 aa17.52■□□□□ 0.39
HDAC5-202ENST00000336057 NUCKS1Q9H1E3 243 aaKnown RBP17.52■□□□□ 0.39
HDAC5-202ENST00000336057 TSKSQ9UJT2 592 aa17.52■□□□□ 0.39
HDAC5-202ENST00000336057 ERCC5P28715 1186 aaPredicted RBP17.52■□□□□ 0.39
HDAC5-202ENST00000336057 KLHL30Q0D2K2 578 aa17.52■□□□□ 0.39
HDAC5-202ENST00000336057 TTC31Q49AM3 519 aaPredicted RBP17.52■□□□□ 0.39
HDAC5-202ENST00000336057 RRAGAQ7L523 313 aa17.52■□□□□ 0.39
HDAC5-202ENST00000336057 CCDC50Q8IVM0 306 aa17.52■□□□□ 0.39
HDAC5-202ENST00000336057 TTC14Q96N46 770 aa17.52■□□□□ 0.39
HDAC5-202ENST00000336057 GSDMAQ96QA5 445 aa17.52■□□□□ 0.39
HDAC5-202ENST00000336057 RNF26Q9BY78 433 aaPredicted RBP17.52■□□□□ 0.39
HDAC5-202ENST00000336057 ASAP1Q9ULH1 1129 aa17.52■□□□□ 0.39
HDAC5-202ENST00000336057 PARP3Q9Y6F1 533 aa17.52■□□□□ 0.39
HDAC5-202ENST00000336057 INF2Q27J81 1249 aa17.51■□□□□ 0.39
HDAC5-202ENST00000336057 C2CD5Q86YS7 1000 aa17.51■□□□□ 0.39
HDAC5-202ENST00000336057 IPO4Q8TEX9 1081 aaKnown RBP17.51■□□□□ 0.39
HDAC5-202ENST00000336057 CSRNP2Q9H175 543 aa17.51■□□□□ 0.39
HDAC5-202ENST00000336057 HOMER2Q9NSB8 354 aa17.51■□□□□ 0.39
HDAC5-202ENST00000336057 TBC1D7Q9P0N9 293 aa17.51■□□□□ 0.39
HDAC5-202ENST00000336057 PPP1R7Q15435 360 aa17.51■□□□□ 0.39
HDAC5-202ENST00000336057 SEL1L2Q5TEA6 688 aa17.51■□□□□ 0.39
HDAC5-202ENST00000336057 SFMBT2Q5VUG0 894 aa17.51■□□□□ 0.39
HDAC5-202ENST00000336057 NCAPH2Q6IBW4 605 aa17.51■□□□□ 0.39
HDAC5-202ENST00000336057 DNM3Q9UQ16 869 aa17.51■□□□□ 0.39
HDAC5-202ENST00000336057 A6NNZ2 444 aa17.51■□□□□ 0.39
HDAC5-202ENST00000336057 TOB2Q14106 344 aaPredicted RBP17.51■□□□□ 0.39
HDAC5-202ENST00000336057 TUBB8Q3ZCM7 444 aa17.51■□□□□ 0.39
HDAC5-202ENST00000336057 CFAP221Q4G0U5 840 aa17.51■□□□□ 0.39
HDAC5-202ENST00000336057 PI16Q6UXB8 463 aa17.51■□□□□ 0.39
HDAC5-202ENST00000336057 CCDC25Q86WR0 208 aa17.51■□□□□ 0.39
HDAC5-202ENST00000336057 GPIHBP1Q8IV16 184 aa17.51■□□□□ 0.39
HDAC5-202ENST00000336057 NELFCDQ8IXH7 590 aa17.51■□□□□ 0.39
HDAC5-202ENST00000336057 STK24Q9Y6E0 443 aa17.51■□□□□ 0.39
HDAC5-202ENST00000336057 MSL1Q68DK7 614 aa17.5■□□□□ 0.39
HDAC5-202ENST00000336057 BIN2Q9UBW5 565 aaPredicted RBP17.5■□□□□ 0.39
HDAC5-202ENST00000336057 CHMP2AO43633 222 aa17.5■□□□□ 0.39
HDAC5-202ENST00000336057 IGKV5-2P06315 115 aa17.5■□□□□ 0.39
HDAC5-202ENST00000336057 TBC1D22AQ8WUA7 517 aa17.5■□□□□ 0.39
HDAC5-202ENST00000336057 CARD10Q9BWT7 1032 aa17.5■□□□□ 0.39
HDAC5-202ENST00000336057 HAUS4Q9H6D7 363 aa17.5■□□□□ 0.39
HDAC5-202ENST00000336057 LRRIQ1Q96JM4 1722 aa17.5■□□□□ 0.39
HDAC5-202ENST00000336057 RPN1P04843 607 aaKnown RBP17.5■□□□□ 0.39
HDAC5-202ENST00000336057 PLCB3Q01970 1234 aa17.5■□□□□ 0.39
HDAC5-202ENST00000336057 TTLL12Q14166 644 aaPredicted RBP17.5■□□□□ 0.39
HDAC5-202ENST00000336057 GALNT17Q6IS24 598 aa17.5■□□□□ 0.39
HDAC5-202ENST00000336057 TICAM2Q86XR7 235 aa17.5■□□□□ 0.39
HDAC5-202ENST00000336057 NT5C3AQ9H0P0 336 aa17.5■□□□□ 0.39
HDAC5-202ENST00000336057 HEG1Q9ULI3 1381 aa17.5■□□□□ 0.39
HDAC5-202ENST00000336057 SH2B2O14492 632 aaPredicted RBP17.49■□□□□ 0.39
HDAC5-202ENST00000336057 NDUFAB1O14561 156 aa17.49■□□□□ 0.39
HDAC5-202ENST00000336057 LONP1P36776 959 aaKnown RBP17.49■□□□□ 0.39
HDAC5-202ENST00000336057 SND1Q7KZF4 910 aaKnown RBP eCLIP17.49■□□□□ 0.39
HDAC5-202ENST00000336057 MPHOSPH6Q99547 160 aaKnown RBP17.49■□□□□ 0.39
HDAC5-202ENST00000336057 HPDP32754 393 aaPredicted RBP17.49■□□□□ 0.39
HDAC5-202ENST00000336057 GTF2A1P52655 376 aaPredicted RBP17.49■□□□□ 0.39
HDAC5-202ENST00000336057 GPATCH11Q8N954 259 aa17.49■□□□□ 0.39
HDAC5-202ENST00000336057 TRIM58Q8NG06 486 aa17.49■□□□□ 0.39
HDAC5-202ENST00000336057 NLRC4Q9NPP4 1024 aa17.49■□□□□ 0.39
HDAC5-202ENST00000336057 NCAPD2Q15021 1401 aa17.49■□□□□ 0.39
HDAC5-202ENST00000336057 EPHA10Q5JZY3 1008 aa17.49■□□□□ 0.39
HDAC5-202ENST00000336057 LRRC45Q96CN5 670 aa17.49■□□□□ 0.39
HDAC5-202ENST00000336057 SH2D4AQ9H788 454 aa17.49■□□□□ 0.39
HDAC5-202ENST00000336057 H7C1W4 665 aa17.49■□□□□ 0.39
HDAC5-202ENST00000336057 RAD51AP2Q09MP3 1159 aa17.49■□□□□ 0.39
HDAC5-202ENST00000336057 PAK2Q13177 524 aa17.49■□□□□ 0.39
HDAC5-202ENST00000336057 B4GALNT4Q76KP1 1039 aa17.49■□□□□ 0.39
HDAC5-202ENST00000336057 GPKOWQ92917 476 aaPredicted RBP eCLIP17.49■□□□□ 0.39
HDAC5-202ENST00000336057 CCDC114Q96M63 670 aa17.49■□□□□ 0.39
HDAC5-202ENST00000336057 CEP104O60308 925 aa17.48■□□□□ 0.39
HDAC5-202ENST00000336057 FLOT1O75955 427 aa17.48■□□□□ 0.39
HDAC5-202ENST00000336057 OR52Z1P0C646 297 aa17.48■□□□□ 0.39
HDAC5-202ENST00000336057 IFNAR1P17181 557 aa17.48■□□□□ 0.39
HDAC5-202ENST00000336057 IL6STP40189 918 aaPredicted RBP17.48■□□□□ 0.39
HDAC5-202ENST00000336057 PDLIM2Q96JY6 352 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms