RNA–Protein interactions for RNA: ENST00000335503.3

CCT6A-202, Transcript of chaperonin containing TCP1 subunit 6A, humanhuman

TSL 5 BASIC

Gene CCT6A, Length 2,529 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6A-202ENST00000335503 IGKV6D-41A0A0C4DH26 115 aa19.42■□□□□ 0.7
CCT6A-202ENST00000335503 WNT10BO00744 389 aa19.42■□□□□ 0.7
CCT6A-202ENST00000335503 TOP1P11387 765 aaKnown RBP19.42■□□□□ 0.7
CCT6A-202ENST00000335503 OTUD7BQ6GQQ9 843 aa19.42■□□□□ 0.7
CCT6A-202ENST00000335503 FAM151AQ8WW52 585 aa19.42■□□□□ 0.7
CCT6A-202ENST00000335503 DPF2Q92785 391 aa19.42■□□□□ 0.7
CCT6A-202ENST00000335503 CSRNP1Q96S65 589 aa19.42■□□□□ 0.7
CCT6A-202ENST00000335503 GDPD2Q9HCC8 539 aa19.42■□□□□ 0.7
CCT6A-202ENST00000335503 MTMR4Q9NYA4 1195 aa19.42■□□□□ 0.7
CCT6A-202ENST00000335503 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.42■□□□□ 0.7
CCT6A-202ENST00000335503 FAM196BA6NMK8 535 aa19.41■□□□□ 0.7
CCT6A-202ENST00000335503 SLURP2P0DP57 97 aa19.41■□□□□ 0.7
CCT6A-202ENST00000335503 KRT85P78386 507 aa19.41■□□□□ 0.7
CCT6A-202ENST00000335503 FUT2Q10981 343 aa19.41■□□□□ 0.7
CCT6A-202ENST00000335503 TRIM29Q14134 588 aa19.41■□□□□ 0.7
CCT6A-202ENST00000335503 GRM4Q14833 912 aa19.41■□□□□ 0.7
CCT6A-202ENST00000335503 FAM173BQ6P4H8 233 aa19.41■□□□□ 0.7
CCT6A-202ENST00000335503 METTL16Q86W50 562 aaKnown RBP19.41■□□□□ 0.7
CCT6A-202ENST00000335503 TMEM87AQ8NBN3 555 aa19.41■□□□□ 0.7
CCT6A-202ENST00000335503 GJB4Q9NTQ9 266 aa19.41■□□□□ 0.7
CCT6A-202ENST00000335503 AKAP17AQ02040 695 aaKnown RBP19.41■□□□□ 0.7
CCT6A-202ENST00000335503 PDLIM2Q96JY6 352 aa19.41■□□□□ 0.7
CCT6A-202ENST00000335503 CNTNAP5Q8WYK1 1306 aa19.4■□□□□ 0.7
CCT6A-202ENST00000335503 UBE2Q2LH0YL09 131 aa19.4■□□□□ 0.7
CCT6A-202ENST00000335503 MPHOSPH10O00566 681 aaKnown RBP19.4■□□□□ 0.7
CCT6A-202ENST00000335503 FIBPO43427 364 aa19.4■□□□□ 0.7
CCT6A-202ENST00000335503 NBPF9Q3BBW0 867 aa19.4■□□□□ 0.7
CCT6A-202ENST00000335503 MICALL2Q8IY33 904 aa19.4■□□□□ 0.7
CCT6A-202ENST00000335503 GUCY1A2P33402 732 aa19.4■□□□□ 0.7
CCT6A-202ENST00000335503 CSPP1Q1MSJ5 1256 aa19.4■□□□□ 0.7
CCT6A-202ENST00000335503 KRT40Q6A162 431 aa19.4■□□□□ 0.7
CCT6A-202ENST00000335503 TATDN1Q6P1N9 297 aa19.4■□□□□ 0.7
CCT6A-202ENST00000335503 PRPF3O43395 683 aaKnown RBP19.39■□□□□ 0.69
CCT6A-202ENST00000335503 ZNF500O60304 480 aaPredicted RBP19.39■□□□□ 0.69
CCT6A-202ENST00000335503 CERKLQ49MI3 558 aaPredicted RBP19.39■□□□□ 0.69
CCT6A-202ENST00000335503 USP48Q86UV5 1035 aa19.39■□□□□ 0.69
CCT6A-202ENST00000335503 FAM83AQ86UY5 434 aa19.39■□□□□ 0.69
CCT6A-202ENST00000335503 SRBD1Q8N5C6 995 aaKnown RBP19.39■□□□□ 0.69
CCT6A-202ENST00000335503 RBM27Q9P2N5 1060 aaKnown RBP19.39■□□□□ 0.69
CCT6A-202ENST00000335503 HERC5Q9UII4 1024 aaKnown RBP19.39■□□□□ 0.69
CCT6A-202ENST00000335503 TTLL1O95922 423 aa19.38■□□□□ 0.69
CCT6A-202ENST00000335503 GNAQP50148 359 aa19.38■□□□□ 0.69
CCT6A-202ENST00000335503 PPP4R3BQ5MIZ7 849 aa19.38■□□□□ 0.69
CCT6A-202ENST00000335503 MAD2L2Q9UI95 211 aa19.38■□□□□ 0.69
CCT6A-202ENST00000335503 CNOT7Q9UIV1 285 aaKnown RBP19.38■□□□□ 0.69
CCT6A-202ENST00000335503 MTMR7Q9Y216 660 aa19.38■□□□□ 0.69
CCT6A-202ENST00000335503 BAZ2BQ9UIF8 2168 aaKnown RBP19.38■□□□□ 0.69
CCT6A-202ENST00000335503 RBM26Q5T8P6 1007 aaKnown RBP19.38■□□□□ 0.69
CCT6A-202ENST00000335503 CLEC10AQ8IUN9 316 aa19.38■□□□□ 0.69
CCT6A-202ENST00000335503 KIF23Q02241 960 aaPredicted RBP19.37■□□□□ 0.69
CCT6A-202ENST00000335503 V9GY48 417 aaPredicted RBP19.37■□□□□ 0.69
CCT6A-202ENST00000335503 UQCRHLA0A096LP55 91 aa19.36■□□□□ 0.69
CCT6A-202ENST00000335503 EGFRP00533 1210 aa19.36■□□□□ 0.69
CCT6A-202ENST00000335503 UQCRHP07919 91 aa19.36■□□□□ 0.69
CCT6A-202ENST00000335503 TNNI2P48788 182 aa19.36■□□□□ 0.69
CCT6A-202ENST00000335503 BRAPQ7Z569 592 aa19.36■□□□□ 0.69
CCT6A-202ENST00000335503 STAG2Q8N3U4 1231 aa19.36■□□□□ 0.69
CCT6A-202ENST00000335503 GPT2Q8TD30 523 aa19.36■□□□□ 0.69
CCT6A-202ENST00000335503 PKN1Q16512 942 aa19.36■□□□□ 0.69
CCT6A-202ENST00000335503 LRRC47Q8N1G4 583 aaKnown RBP19.36■□□□□ 0.69
CCT6A-202ENST00000335503 TMEM39BQ9GZU3 492 aa19.36■□□□□ 0.69
CCT6A-202ENST00000335503 SCAND2PQ9GZW5 306 aaPredicted RBP19.36■□□□□ 0.69
CCT6A-202ENST00000335503 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.36■□□□□ 0.69
CCT6A-202ENST00000335503 CLIP2Q9UDT6 1046 aa19.36■□□□□ 0.69
CCT6A-202ENST00000335503 PALM3A6NDB9 673 aaPredicted RBP19.35■□□□□ 0.69
CCT6A-202ENST00000335503 PARP1P09874 1014 aaKnown RBP19.35■□□□□ 0.69
CCT6A-202ENST00000335503 SAMD7Q7Z3H4 446 aa19.35■□□□□ 0.69
CCT6A-202ENST00000335503 hCG_1642624A0A1W2PR95 340 aa19.35■□□□□ 0.69
CCT6A-202ENST00000335503 YBX3P16989 372 aaKnown RBP eCLIP19.35■□□□□ 0.697e-8■■□□□ 12.7
CCT6A-202ENST00000335503 XBP1P17861 261 aa19.35■□□□□ 0.69
CCT6A-202ENST00000335503 ABCB5Q2M3G0 1257 aa19.35■□□□□ 0.69
CCT6A-202ENST00000335503 KIF4BQ2VIQ3 1234 aa19.35■□□□□ 0.69
CCT6A-202ENST00000335503 TBC1D10BQ4KMP7 808 aaPredicted RBP19.35■□□□□ 0.69
CCT6A-202ENST00000335503 TMEM179Q6ZVK1 233 aa19.35■□□□□ 0.69
CCT6A-202ENST00000335503 GPC2Q8N158 579 aa19.35■□□□□ 0.69
CCT6A-202ENST00000335503 LZTS2Q9BRK4 669 aa19.35■□□□□ 0.69
CCT6A-202ENST00000335503 TFIP11Q9UBB9 837 aaKnown RBP19.35■□□□□ 0.69
CCT6A-202ENST00000335503 ZKSCAN5Q9Y2L8 839 aa19.35■□□□□ 0.69
CCT6A-202ENST00000335503 KIF28PB7ZC32 967 aa19.34■□□□□ 0.69
CCT6A-202ENST00000335503 MBD3O95983 291 aa19.34■□□□□ 0.69
CCT6A-202ENST00000335503 MMP1P03956 469 aa19.34■□□□□ 0.69
CCT6A-202ENST00000335503 GNL2Q13823 731 aaKnown RBP19.34■□□□□ 0.69
CCT6A-202ENST00000335503 TNFAIP1Q13829 316 aa19.34■□□□□ 0.69
CCT6A-202ENST00000335503 ATL3Q6DD88 541 aa19.34■□□□□ 0.69
CCT6A-202ENST00000335503 RASGRP2Q7LDG7 609 aa19.34■□□□□ 0.69
CCT6A-202ENST00000335503 ZNF396Q96N95 335 aaPredicted RBP19.34■□□□□ 0.69
CCT6A-202ENST00000335503 CFAP45Q9UL16 551 aa19.34■□□□□ 0.69
CCT6A-202ENST00000335503 GDF11O95390 407 aa19.34■□□□□ 0.69
CCT6A-202ENST00000335503 SHROOM1Q2M3G4 852 aaPredicted RBP19.34■□□□□ 0.69
CCT6A-202ENST00000335503 MAP7D2Q96T17 732 aa19.34■□□□□ 0.69
CCT6A-202ENST00000335503 KANSL2Q9H9L4 492 aa19.34■□□□□ 0.69
CCT6A-202ENST00000335503 ELP1O95163 1332 aa19.34■□□□□ 0.69
CCT6A-202ENST00000335503 ATAD5Q96QE3 1844 aa19.34■□□□□ 0.69
CCT6A-202ENST00000335503 H7C1D1 291 aa19.33■□□□□ 0.69
CCT6A-202ENST00000335503 GADD45BO75293 160 aaPredicted RBP19.33■□□□□ 0.69
CCT6A-202ENST00000335503 PDHBP11177 359 aa19.33■□□□□ 0.69
CCT6A-202ENST00000335503 ATP2B2Q01814 1243 aa19.33■□□□□ 0.69
CCT6A-202ENST00000335503 SAFBQ15424 915 aaKnown RBP eCLIP19.33■□□□□ 0.69
CCT6A-202ENST00000335503 SPATA32Q96LK8 384 aa19.33■□□□□ 0.69
CCT6A-202ENST00000335503 KLRF2D3W0D1 207 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms