RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 ZNF654Q8IZM8 581 aa11.05□□□□□ -0.64
C11orf54-201ENST00000331239 GTF3C6Q969F1 213 aa11.05□□□□□ -0.64
C11orf54-201ENST00000331239 CEP95Q96GE4 821 aa11.05□□□□□ -0.64
C11orf54-201ENST00000331239 GMCL1Q96IK5 515 aa11.05□□□□□ -0.64
C11orf54-201ENST00000331239 PICK1Q9NRD5 415 aa11.05□□□□□ -0.64
C11orf54-201ENST00000331239 TMX2Q9Y320 296 aa11.05□□□□□ -0.64
C11orf54-201ENST00000331239 ZDHHC9Q9Y397 364 aa11.05□□□□□ -0.64
C11orf54-201ENST00000331239 GUCY1A2P33402 732 aa11.04□□□□□ -0.64
C11orf54-201ENST00000331239 HMGN5P82970 282 aaKnown RBP11.04□□□□□ -0.64
C11orf54-201ENST00000331239 ICA1Q05084 483 aa11.04□□□□□ -0.64
C11orf54-201ENST00000331239 TROAPQ12815 778 aa11.04□□□□□ -0.64
C11orf54-201ENST00000331239 ASPRV1Q53RT3 343 aa11.04□□□□□ -0.64
C11orf54-201ENST00000331239 GPATCH4Q5T3I0 446 aaKnown RBP11.04□□□□□ -0.64
C11orf54-201ENST00000331239 HOMEZQ8IX15 550 aa11.04□□□□□ -0.64
C11orf54-201ENST00000331239 SMC1BQ8NDV3 1235 aa11.04□□□□□ -0.64
C11orf54-201ENST00000331239 LPAR1Q92633 364 aa11.04□□□□□ -0.64
C11orf54-201ENST00000331239 TMEM47Q9BQJ4 181 aa11.04□□□□□ -0.64
C11orf54-201ENST00000331239 GOPCQ9HD26 462 aa11.04□□□□□ -0.64
C11orf54-201ENST00000331239 PNMA2Q9UL42 364 aa11.04□□□□□ -0.64
C11orf54-201ENST00000331239 TPCN1Q9ULQ1 816 aa11.04□□□□□ -0.64
C11orf54-201ENST00000331239 KLF18A0A0U1RQI7 1052 aa11.04□□□□□ -0.64
C11orf54-201ENST00000331239 GRM4Q14833 912 aa11.04□□□□□ -0.64
C11orf54-201ENST00000331239 PNMA1Q8ND90 353 aa11.04□□□□□ -0.64
C11orf54-201ENST00000331239 KIAA1683Q9H0B3 1180 aa11.04□□□□□ -0.64
C11orf54-201ENST00000331239 NMRK2Q9NPI5 230 aa11.04□□□□□ -0.64
C11orf54-201ENST00000331239 CSADQ9Y600 493 aa11.04□□□□□ -0.64
C11orf54-201ENST00000331239 SMIM22K7EJ46 135 aa11.03□□□□□ -0.64
C11orf54-201ENST00000331239 MPHOSPH10O00566 681 aaKnown RBP11.03□□□□□ -0.64
C11orf54-201ENST00000331239 ITGBL1O95965 494 aaPredicted RBP11.03□□□□□ -0.64
C11orf54-201ENST00000331239 GH2P01242 217 aa11.03□□□□□ -0.64
C11orf54-201ENST00000331239 CPA1P15085 419 aa11.03□□□□□ -0.64
C11orf54-201ENST00000331239 ZNF445P59923 1031 aa11.03□□□□□ -0.64
C11orf54-201ENST00000331239 EVX2Q03828 476 aa11.03□□□□□ -0.64
C11orf54-201ENST00000331239 PPATQ06203 517 aa11.03□□□□□ -0.64
C11orf54-201ENST00000331239 FANCBQ8NB91 859 aa11.03□□□□□ -0.64
C11orf54-201ENST00000331239 CTCFLQ8NI51 663 aaPredicted RBP11.03□□□□□ -0.64
C11orf54-201ENST00000331239 C12orf42Q96LP6 360 aa11.03□□□□□ -0.64
C11orf54-201ENST00000331239 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.03□□□□□ -0.64
C11orf54-201ENST00000331239 PHIPQ8WWQ0 1821 aa11.03□□□□□ -0.64
C11orf54-201ENST00000331239 STK36Q9NRP7 1315 aa11.03□□□□□ -0.64
C11orf54-201ENST00000331239 ADM5C9JUS6 153 aa11.03□□□□□ -0.64
C11orf54-201ENST00000331239 CXCL11O14625 94 aa11.03□□□□□ -0.64
C11orf54-201ENST00000331239 FDX1P10109 184 aa11.03□□□□□ -0.64
C11orf54-201ENST00000331239 METAP2P50579 478 aaKnown RBP eCLIP11.03□□□□□ -0.64
C11orf54-201ENST00000331239 TRAF1Q13077 416 aa11.03□□□□□ -0.64
C11orf54-201ENST00000331239 ME3Q16798 604 aa11.03□□□□□ -0.64
C11orf54-201ENST00000331239 CAVIN1Q6NZI2 390 aaKnown RBP11.03□□□□□ -0.64
C11orf54-201ENST00000331239 MIGA2Q7L4E1 593 aa11.03□□□□□ -0.64
C11orf54-201ENST00000331239 C2orf69Q8N8R5 385 aa11.03□□□□□ -0.64
C11orf54-201ENST00000331239 HHIPL1Q96JK4 782 aa11.03□□□□□ -0.64
C11orf54-201ENST00000331239 WRNIP1Q96S55 665 aa11.03□□□□□ -0.64
C11orf54-201ENST00000331239 MAF1Q9H063 256 aa11.03□□□□□ -0.64
C11orf54-201ENST00000331239 EEF2P13639 858 aaKnown RBP11.02□□□□□ -0.64
C11orf54-201ENST00000331239 CLCN1P35523 988 aa11.02□□□□□ -0.64
C11orf54-201ENST00000331239 NASPP49321 788 aaPredicted RBP11.02□□□□□ -0.64
C11orf54-201ENST00000331239 APOBRQ0VD83 1088 aa11.02□□□□□ -0.64
C11orf54-201ENST00000331239 SEPT2Q15019 361 aa11.02□□□□□ -0.64
C11orf54-201ENST00000331239 SH3D19Q5HYK7 790 aa11.02□□□□□ -0.64
C11orf54-201ENST00000331239 ERO1BQ86YB8 467 aa11.02□□□□□ -0.64
C11orf54-201ENST00000331239 WASF1Q92558 559 aa11.02□□□□□ -0.64
C11orf54-201ENST00000331239 GLIS2Q9BZE0 524 aaPredicted RBP11.02□□□□□ -0.64
C11orf54-201ENST00000331239 STX8Q9UNK0 236 aa11.02□□□□□ -0.64
C11orf54-201ENST00000331239 HPS5Q9UPZ3 1129 aa11.02□□□□□ -0.64
C11orf54-201ENST00000331239 PASKQ96RG2 1323 aa11.02□□□□□ -0.65
C11orf54-201ENST00000331239 OTOFQ9HC10 1997 aa11.02□□□□□ -0.65
C11orf54-201ENST00000331239 PALM3A6NDB9 673 aaPredicted RBP11.02□□□□□ -0.65
C11orf54-201ENST00000331239 GOLGA8BA8MQT2 603 aa11.02□□□□□ -0.65
C11orf54-201ENST00000331239 TOMM70O94826 608 aa11.02□□□□□ -0.65
C11orf54-201ENST00000331239 IFNAR1P17181 557 aa11.02□□□□□ -0.65
C11orf54-201ENST00000331239 PTPRAP18433 802 aa11.02□□□□□ -0.65
C11orf54-201ENST00000331239 NCLP19338 710 aaKnown RBP11.02□□□□□ -0.65
C11orf54-201ENST00000331239 PDCP20941 246 aa11.02□□□□□ -0.65
C11orf54-201ENST00000331239 RRP1BQ14684 758 aaKnown RBP11.02□□□□□ -0.65
C11orf54-201ENST00000331239 RTN1Q16799 776 aa11.02□□□□□ -0.65
C11orf54-201ENST00000331239 ZSCAN23Q3MJ62 389 aa11.02□□□□□ -0.65
C11orf54-201ENST00000331239 USP17L2Q6R6M4 530 aa11.02□□□□□ -0.65
C11orf54-201ENST00000331239 SIAH1Q8IUQ4 282 aa11.02□□□□□ -0.65
C11orf54-201ENST00000331239 TRIM44Q96DX7 344 aaPredicted RBP11.02□□□□□ -0.65
C11orf54-201ENST00000331239 CLIP2Q9UDT6 1046 aa11.02□□□□□ -0.65
C11orf54-201ENST00000331239 SPDYE5A6NIY4 337 aa11.01□□□□□ -0.65
C11orf54-201ENST00000331239 GOLGA8AA7E2F4 631 aa11.01□□□□□ -0.65
C11orf54-201ENST00000331239 hCG_1984214I3L0E3 225 aa11.01□□□□□ -0.65
C11orf54-201ENST00000331239 TULP1O00294 542 aaPredicted RBP11.01□□□□□ -0.65
C11orf54-201ENST00000331239 KIF3CO14782 793 aa11.01□□□□□ -0.65
C11orf54-201ENST00000331239 PRPF40AO75400 957 aaKnown RBP11.01□□□□□ -0.65
C11orf54-201ENST00000331239 BRD1O95696 1058 aa11.01□□□□□ -0.65
C11orf54-201ENST00000331239 PPIL2Q13356 520 aa11.01□□□□□ -0.65
C11orf54-201ENST00000331239 BTNL9Q6UXG8 535 aa11.01□□□□□ -0.65
C11orf54-201ENST00000331239 NOL8Q76FK4 1167 aaKnown RBP11.01□□□□□ -0.65
C11orf54-201ENST00000331239 CHST3Q7LGC8 479 aa11.01□□□□□ -0.65
C11orf54-201ENST00000331239 ZNF713Q8N859 430 aaPredicted RBP11.01□□□□□ -0.65
C11orf54-201ENST00000331239 ZNF280CQ8ND82 737 aa11.01□□□□□ -0.65
C11orf54-201ENST00000331239 SMARCC2Q8TAQ2 1214 aa11.01□□□□□ -0.65
C11orf54-201ENST00000331239 SPZ1Q9BXG8 430 aa11.01□□□□□ -0.65
C11orf54-201ENST00000331239 VCPKMTQ9H867 229 aa11.01□□□□□ -0.65
C11orf54-201ENST00000331239 USP17L10C9JJH3 530 aa11.01□□□□□ -0.65
C11orf54-201ENST00000331239 PARP1P09874 1014 aaKnown RBP11.01□□□□□ -0.65
C11orf54-201ENST00000331239 CCDC173Q0VFZ6 552 aa11.01□□□□□ -0.65
C11orf54-201ENST00000331239 SLC4A8Q2Y0W8 1093 aa11.01□□□□□ -0.65
C11orf54-201ENST00000331239 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms