RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 ADGRG1Q9Y653 693 aa19.73■□□□□ 0.75
PTP4A3-201ENST00000329397 BCORQ6W2J9 1755 aa19.73■□□□□ 0.75
PTP4A3-201ENST00000329397 SPATA1Q5VX52 437 aa19.72■□□□□ 0.75
PTP4A3-201ENST00000329397 C3orf67Q6ZVT6 689 aa19.72■□□□□ 0.75
PTP4A3-201ENST00000329397 CDC5LQ99459 802 aaKnown RBP19.72■□□□□ 0.75
PTP4A3-201ENST00000329397 VPS16Q9H269 839 aa19.72■□□□□ 0.75
PTP4A3-201ENST00000329397 AATFQ9NY61 560 aaKnown RBP eCLIP19.72■□□□□ 0.756e-8■■■■□ 22.8
PTP4A3-201ENST00000329397 LRP5O75197 1615 aa19.72■□□□□ 0.75
PTP4A3-201ENST00000329397 PPP1R3GB7ZBB8 358 aa19.72■□□□□ 0.75
PTP4A3-201ENST00000329397 RSRC2Q7L4I2 434 aaKnown RBP19.72■□□□□ 0.75
PTP4A3-201ENST00000329397 ARAP2Q8WZ64 1704 aa19.72■□□□□ 0.75
PTP4A3-201ENST00000329397 GYPCP04921 128 aa19.72■□□□□ 0.75
PTP4A3-201ENST00000329397 ERCC5P28715 1186 aaPredicted RBP19.72■□□□□ 0.75
PTP4A3-201ENST00000329397 OAS2P29728 719 aaKnown RBP19.72■□□□□ 0.75
PTP4A3-201ENST00000329397 MCM7P33993 719 aa19.72■□□□□ 0.75
PTP4A3-201ENST00000329397 IRX3P78415 501 aaPredicted RBP19.72■□□□□ 0.75
PTP4A3-201ENST00000329397 NPY5RQ15761 445 aa19.72■□□□□ 0.75
PTP4A3-201ENST00000329397 CCDC152Q4G0S7 254 aa19.72■□□□□ 0.75
PTP4A3-201ENST00000329397 ZNF569Q5MCW4 686 aa19.72■□□□□ 0.75
PTP4A3-201ENST00000329397 PIK3AP1Q6ZUJ8 805 aa19.72■□□□□ 0.75
PTP4A3-201ENST00000329397 ELOA2Q8IYF1 753 aaPredicted RBP19.72■□□□□ 0.75
PTP4A3-201ENST00000329397 TMTC2Q8N394 836 aa19.72■□□□□ 0.75
PTP4A3-201ENST00000329397 ZNF384Q8TF68 577 aa19.72■□□□□ 0.75
PTP4A3-201ENST00000329397 COL1A1P02452 1464 aaPredicted RBP19.72■□□□□ 0.75
PTP4A3-201ENST00000329397 XDHP47989 1333 aa19.71■□□□□ 0.75
PTP4A3-201ENST00000329397 KANK3Q6NY19 840 aa19.71■□□□□ 0.75
PTP4A3-201ENST00000329397 INTS5Q6P9B9 1019 aaKnown RBP19.71■□□□□ 0.75
PTP4A3-201ENST00000329397 KLRK1P26718 216 aa19.71■□□□□ 0.75
PTP4A3-201ENST00000329397 CRKLP46109 303 aaKnown RBP19.71■□□□□ 0.75
PTP4A3-201ENST00000329397 EIF5P55010 431 aaKnown RBP19.71■□□□□ 0.75
PTP4A3-201ENST00000329397 TTC38Q5R3I4 469 aa19.71■□□□□ 0.75
PTP4A3-201ENST00000329397 CATIPQ7Z7H3 387 aa19.71■□□□□ 0.75
PTP4A3-201ENST00000329397 GOLGA6L9A6NEM1 432 aa19.7■□□□□ 0.74
PTP4A3-201ENST00000329397 ATP6V1AP38606 617 aa19.7■□□□□ 0.74
PTP4A3-201ENST00000329397 EEF2KMTQ96G04 330 aa19.7■□□□□ 0.74
PTP4A3-201ENST00000329397 MTRQ99707 1265 aa19.7■□□□□ 0.74
PTP4A3-201ENST00000329397 RIOK1Q9BRS2 568 aaKnown RBP19.7■□□□□ 0.74
PTP4A3-201ENST00000329397 TAB2Q9NYJ8 693 aa19.7■□□□□ 0.74
PTP4A3-201ENST00000329397 MTMR7Q9Y216 660 aa19.7■□□□□ 0.74
PTP4A3-201ENST00000329397 MYH13Q9UKX3 1938 aa19.7■□□□□ 0.74
PTP4A3-201ENST00000329397 CICQ96RK0 1608 aaPredicted RBP19.7■□□□□ 0.74
PTP4A3-201ENST00000329397 USP17L12C9JPN9 530 aa19.7■□□□□ 0.74
PTP4A3-201ENST00000329397 USP17L21D6R901 530 aa19.7■□□□□ 0.74
PTP4A3-201ENST00000329397 MFAP3LO75121 409 aa19.7■□□□□ 0.74
PTP4A3-201ENST00000329397 XBP1P17861 261 aa19.7■□□□□ 0.74
PTP4A3-201ENST00000329397 TROAPQ12815 778 aa19.7■□□□□ 0.74
PTP4A3-201ENST00000329397 SRBD1Q8N5C6 995 aaKnown RBP19.7■□□□□ 0.74
PTP4A3-201ENST00000329397 GPR161Q8N6U8 529 aaKnown RBP19.7■□□□□ 0.74
PTP4A3-201ENST00000329397 SUGCTQ9HAC7 445 aa19.7■□□□□ 0.74
PTP4A3-201ENST00000329397 EXOC5O00471 708 aa19.69■□□□□ 0.74
PTP4A3-201ENST00000329397 CYP2D6P10635 497 aa19.69■□□□□ 0.74
PTP4A3-201ENST00000329397 KCNQ4P56696 695 aa19.69■□□□□ 0.74
PTP4A3-201ENST00000329397 IL17AQ16552 155 aa19.69■□□□□ 0.74
PTP4A3-201ENST00000329397 CDKAL1Q5VV42 579 aa19.69■□□□□ 0.74
PTP4A3-201ENST00000329397 RRAGBQ5VZM2 374 aa19.69■□□□□ 0.74
PTP4A3-201ENST00000329397 SH3RF1Q7Z6J0 888 aa19.69■□□□□ 0.74
PTP4A3-201ENST00000329397 RASGRP4Q8TDF6 673 aa19.69■□□□□ 0.74
PTP4A3-201ENST00000329397 GOLGA1Q92805 767 aa19.69■□□□□ 0.74
PTP4A3-201ENST00000329397 ARFGAP3Q9NP61 516 aa19.69■□□□□ 0.74
PTP4A3-201ENST00000329397 RTL9Q8NET4 1388 aa19.69■□□□□ 0.74
PTP4A3-201ENST00000329397 NHSL1Q5SYE7 1610 aa19.69■□□□□ 0.74
PTP4A3-201ENST00000329397 PBX1P40424 430 aa19.68■□□□□ 0.74
PTP4A3-201ENST00000329397 SMC1AQ14683 1233 aaKnown RBP19.68■□□□□ 0.74
PTP4A3-201ENST00000329397 KRT31Q15323 416 aa19.68■□□□□ 0.74
PTP4A3-201ENST00000329397 WWC2Q6AWC2 1192 aa19.68■□□□□ 0.74
PTP4A3-201ENST00000329397 PANX2Q96RD6 677 aa19.68■□□□□ 0.74
PTP4A3-201ENST00000329397 PLIN2Q99541 437 aa19.68■□□□□ 0.74
PTP4A3-201ENST00000329397 TFR2Q9UP52 801 aa19.68■□□□□ 0.74
PTP4A3-201ENST00000329397 GDAQ9Y2T3 454 aa19.68■□□□□ 0.74
PTP4A3-201ENST00000329397 N4BP3O15049 544 aa19.68■□□□□ 0.74
PTP4A3-201ENST00000329397 CYP2C19P33261 490 aa19.68■□□□□ 0.74
PTP4A3-201ENST00000329397 CHMP4BP1P59074 171 aa19.68■□□□□ 0.74
PTP4A3-201ENST00000329397 ERVK-24P63145 666 aa19.68■□□□□ 0.74
PTP4A3-201ENST00000329397 BICDL1Q6ZP65 573 aa19.68■□□□□ 0.74
PTP4A3-201ENST00000329397 SLC35F6Q8N357 371 aa19.68■□□□□ 0.74
PTP4A3-201ENST00000329397 CAMTA2O94983 1202 aa19.67■□□□□ 0.74
PTP4A3-201ENST00000329397 NTSR2O95665 410 aa19.67■□□□□ 0.74
PTP4A3-201ENST00000329397 KIF4BQ2VIQ3 1234 aa19.67■□□□□ 0.74
PTP4A3-201ENST00000329397 CCDC24Q8N4L8 307 aa19.67■□□□□ 0.74
PTP4A3-201ENST00000329397 CCDC87Q9NVE4 849 aa19.67■□□□□ 0.74
PTP4A3-201ENST00000329397 TRIM49BA6NDI0 452 aa19.67■□□□□ 0.74
PTP4A3-201ENST00000329397 PRPF3O43395 683 aaKnown RBP19.67■□□□□ 0.74
PTP4A3-201ENST00000329397 RHOXF2BP0C7M4 288 aa19.67■□□□□ 0.74
PTP4A3-201ENST00000329397 ITPK1Q13572 414 aa19.67■□□□□ 0.74
PTP4A3-201ENST00000329397 IQCA1Q86XH1 822 aa19.67■□□□□ 0.74
PTP4A3-201ENST00000329397 TNFRSF25Q93038 417 aa19.67■□□□□ 0.74
PTP4A3-201ENST00000329397 PNKPQ96T60 521 aa19.67■□□□□ 0.74
PTP4A3-201ENST00000329397 RHOXF2Q9BQY4 288 aa19.67■□□□□ 0.74
PTP4A3-201ENST00000329397 FUT8Q9BYC5 575 aa19.67■□□□□ 0.74
PTP4A3-201ENST00000329397 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.67■□□□□ 0.74
PTP4A3-201ENST00000329397 TRIM10Q9UDY6 481 aa19.67■□□□□ 0.74
PTP4A3-201ENST00000329397 CNTNAP5Q8WYK1 1306 aa19.67■□□□□ 0.74
PTP4A3-201ENST00000329397 KIF5CO60282 957 aa19.66■□□□□ 0.74
PTP4A3-201ENST00000329397 CTR9Q6PD62 1173 aa19.66■□□□□ 0.74
PTP4A3-201ENST00000329397 GPKOWQ92917 476 aaPredicted RBP eCLIP19.66■□□□□ 0.74
PTP4A3-201ENST00000329397 PLCH1Q4KWH8 1693 aa19.66■□□□□ 0.74
PTP4A3-201ENST00000329397 PES1O00541 588 aaKnown RBP19.66■□□□□ 0.74
PTP4A3-201ENST00000329397 NLRP5P59047 1200 aa19.66■□□□□ 0.74
PTP4A3-201ENST00000329397 MCM6Q14566 821 aa19.66■□□□□ 0.74
PTP4A3-201ENST00000329397 LONRF2Q1L5Z9 754 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms