RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 HOXC10Q9NYD6 342 aa6.03□□□□□ -1.44
LRIT3-201ENST00000327908 ADM5C9JUS6 153 aa6.03□□□□□ -1.44
LRIT3-201ENST00000327908 ZBED4O75132 1171 aa6.03□□□□□ -1.44
LRIT3-201ENST00000327908 GNRH1P01148 92 aa6.03□□□□□ -1.44
LRIT3-201ENST00000327908 PARP1P09874 1014 aaKnown RBP6.03□□□□□ -1.44
LRIT3-201ENST00000327908 RRP12Q5JTH9 1297 aaKnown RBP6.03□□□□□ -1.44
LRIT3-201ENST00000327908 THSD7BQ9C0I4 1608 aa6.03□□□□□ -1.44
LRIT3-201ENST00000327908 STK36Q9NRP7 1315 aa6.03□□□□□ -1.44
LRIT3-201ENST00000327908 PHF20L1A8MW92 1017 aa6.03□□□□□ -1.44
LRIT3-201ENST00000327908 SH2B2O14492 632 aaPredicted RBP6.03□□□□□ -1.44
LRIT3-201ENST00000327908 PTPRAP18433 802 aa6.03□□□□□ -1.44
LRIT3-201ENST00000327908 GRM4Q14833 912 aa6.03□□□□□ -1.44
LRIT3-201ENST00000327908 MAP1SQ66K74 1059 aaPredicted RBP6.03□□□□□ -1.44
LRIT3-201ENST00000327908 LBX2Q6XYB7 198 aa6.03□□□□□ -1.44
LRIT3-201ENST00000327908 SHCBP1Q8NEM2 672 aa6.03□□□□□ -1.44
LRIT3-201ENST00000327908 CCDC148Q8NFR7 591 aa6.03□□□□□ -1.44
LRIT3-201ENST00000327908 BEGAINQ9BUH8 593 aa6.03□□□□□ -1.44
LRIT3-201ENST00000327908 ABT1Q9ULW3 272 aaKnown RBP6.03□□□□□ -1.44
LRIT3-201ENST00000327908 LIMCH1Q9UPQ0 1083 aa6.03□□□□□ -1.44
LRIT3-201ENST00000327908 A0A0G2JLL6 359 aaPredicted RBP6.02□□□□□ -1.45
LRIT3-201ENST00000327908 ZBTB43O43298 467 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 KDM4AO75164 1064 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 SLC25A27O95847 323 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 CASTP20810 708 aaKnown RBP6.02□□□□□ -1.45
LRIT3-201ENST00000327908 HOXA7P31268 230 aaPredicted RBP6.02□□□□□ -1.45
LRIT3-201ENST00000327908 BACE1P56817 501 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 MAP2K1Q02750 393 aaPredicted RBP6.02□□□□□ -1.45
LRIT3-201ENST00000327908 DEFB115Q30KQ5 88 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 SPRYD7Q5W111 196 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 BTNL9Q6UXG8 535 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.02□□□□□ -1.45
LRIT3-201ENST00000327908 PRRT2Q7Z6L0 340 aaPredicted RBP6.02□□□□□ -1.45
LRIT3-201ENST00000327908 BICD2Q8TD16 824 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 BRMS1Q9HCU9 246 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 SEC63Q9UGP8 760 aaKnown RBP6.02□□□□□ -1.45
LRIT3-201ENST00000327908 AGTPBP1Q9UPW5 1226 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 TNKSO95271 1327 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 CPLX1O14810 134 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 GH2P01242 217 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 IRX3P78415 501 aaPredicted RBP6.02□□□□□ -1.45
LRIT3-201ENST00000327908 EXOSC10Q01780 885 aaKnown RBP6.02□□□□□ -1.45
LRIT3-201ENST00000327908 IRF5Q13568 498 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 KIF22Q14807 665 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 SH3BP5LQ7L8J4 393 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 TBC1D10CQ8IV04 446 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 SPZ1Q9BXG8 430 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 ZFYVE28Q9HCC9 887 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 ATAD5Q96QE3 1844 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 LOC285556D6RIA3 1793 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 GOLGA8AA7E2F4 631 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 GOLGA8BA8MQT2 603 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 B4E1Z4 1266 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 BMP3P12645 472 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 HSPA6P17066 643 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 ZNF157P51786 506 aaPredicted RBP6.02□□□□□ -1.45
LRIT3-201ENST00000327908 RTN1Q16799 776 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 SLFN13Q68D06 897 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 ZNF526Q8TF50 670 aaPredicted RBP6.02□□□□□ -1.45
LRIT3-201ENST00000327908 INTS4Q96HW7 963 aaKnown RBP6.02□□□□□ -1.45
LRIT3-201ENST00000327908 CWC22Q9HCG8 908 aaKnown RBP6.02□□□□□ -1.45
LRIT3-201ENST00000327908 SH3GLB2Q9NR46 395 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 SNCAIPQ9Y6H5 919 aa6.02□□□□□ -1.45
LRIT3-201ENST00000327908 ABCB11O95342 1321 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 IRF6O14896 467 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 HOXC6P09630 235 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 CALML3P27482 149 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 PLCD1P51178 756 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 CTDSPL2Q05D32 466 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 VGLL4Q14135 290 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 SLC51AQ86UW1 340 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 MCF2L2Q86YR7 1114 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 RASAL3Q86YV0 1011 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 PNMA1Q8ND90 353 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 SLKQ9H2G2 1235 aaPredicted RBP6.01□□□□□ -1.45
LRIT3-201ENST00000327908 AFG3L2Q9Y4W6 797 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 SSC5DA1L4H1 1573 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 AKR1B1P15121 316 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 HOXD10P28358 340 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 SLC1A4P43007 532 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 METAP2P50579 478 aaKnown RBP eCLIP6.01□□□□□ -1.45
LRIT3-201ENST00000327908 CCDC96Q2M329 555 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 ZNF654Q8IZM8 581 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 PRPF38AQ8NAV1 312 aaKnown RBP6.01□□□□□ -1.45
LRIT3-201ENST00000327908 RRP36Q96EU6 259 aaKnown RBP6.01□□□□□ -1.45
LRIT3-201ENST00000327908 SIPA1L1O43166 1804 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 NEDD4P46934 1319 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 ATP2A1O14983 1001 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 SNHG28P0DPA3 235 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 CYP2D6P10635 497 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 CACNB3P54284 484 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 HAND2P61296 217 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 TRIM29Q14134 588 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 RAB3GAP1Q15042 981 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 SEC23AQ15436 765 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 OPTNQ96CV9 577 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 RNF26Q9BY78 433 aaPredicted RBP6.01□□□□□ -1.45
LRIT3-201ENST00000327908 ZNF408Q9H9D4 720 aa6.01□□□□□ -1.45
LRIT3-201ENST00000327908 MRPL11Q9Y3B7 192 aaKnown RBP6.01□□□□□ -1.45
LRIT3-201ENST00000327908 BAZ2AQ9UIF9 1905 aaKnown RBP6□□□□□ -1.45
LRIT3-201ENST00000327908 FOXP2O15409 715 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms