RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 STAG1Q8WVM7 1258 aa13.16□□□□□ -0.3
LDLRAD3-201ENST00000315571 FAM210AQ96ND0 272 aa13.16□□□□□ -0.3
LDLRAD3-201ENST00000315571 CLIC6Q96NY7 704 aa13.16□□□□□ -0.3
LDLRAD3-201ENST00000315571 CBFA2T2O43439 604 aa13.16□□□□□ -0.3
LDLRAD3-201ENST00000315571 FAM160A1Q05DH4 1040 aa13.16□□□□□ -0.3
LDLRAD3-201ENST00000315571 TFCP2Q12800 502 aa13.16□□□□□ -0.3
LDLRAD3-201ENST00000315571 CCDC93Q567U6 631 aa13.16□□□□□ -0.3
LDLRAD3-201ENST00000315571 ZSCAN31Q96LW9 406 aaPredicted RBP13.16□□□□□ -0.3
LDLRAD3-201ENST00000315571 TMX4Q9H1E5 349 aaPredicted RBP13.16□□□□□ -0.3
LDLRAD3-201ENST00000315571 PPP2R2CQ9Y2T4 447 aa13.16□□□□□ -0.3
LDLRAD3-201ENST00000315571 SASH1O94885 1247 aa13.15□□□□□ -0.3
LDLRAD3-201ENST00000315571 IFIT2P09913 472 aaKnown RBP13.15□□□□□ -0.3
LDLRAD3-201ENST00000315571 RPS8P62241 208 aaKnown RBP13.15□□□□□ -0.3
LDLRAD3-201ENST00000315571 IFT88Q13099 833 aa13.15□□□□□ -0.3
LDLRAD3-201ENST00000315571 GNPTABQ3T906 1256 aa13.15□□□□□ -0.3
LDLRAD3-201ENST00000315571 FAXDC2Q96IV6 333 aa13.15□□□□□ -0.3
LDLRAD3-201ENST00000315571 WDR24Q96S15 920 aa13.15□□□□□ -0.3
LDLRAD3-201ENST00000315571 ATP1A2P50993 1020 aa13.15□□□□□ -0.3
LDLRAD3-201ENST00000315571 PRPF40BQ6NWY9 871 aaKnown RBP13.15□□□□□ -0.3
LDLRAD3-201ENST00000315571 KCNV1Q6PIU1 500 aa13.15□□□□□ -0.3
LDLRAD3-201ENST00000315571 AACSQ86V21 672 aa13.15□□□□□ -0.3
LDLRAD3-201ENST00000315571 CCDC26Q8TAB7 109 aa13.15□□□□□ -0.3
LDLRAD3-201ENST00000315571 CELF1Q92879 486 aaKnown RBP13.15□□□□□ -0.3
LDLRAD3-201ENST00000315571 BAG1Q99933 345 aaPredicted RBP13.15□□□□□ -0.3
LDLRAD3-201ENST00000315571 TPCN1Q9ULQ1 816 aa13.15□□□□□ -0.3
LDLRAD3-201ENST00000315571 DDX60Q8IY21 1712 aaKnown RBP13.15□□□□□ -0.3
LDLRAD3-201ENST00000315571 PPFIA3O75145 1194 aa13.15□□□□□ -0.31
LDLRAD3-201ENST00000315571 ATG9AQ7Z3C6 839 aa13.15□□□□□ -0.31
LDLRAD3-201ENST00000315571 C2CD5Q86YS7 1000 aa13.15□□□□□ -0.31
LDLRAD3-201ENST00000315571 H0YIN7 160 aa13.14□□□□□ -0.31
LDLRAD3-201ENST00000315571 CRY2Q49AN0 593 aa13.14□□□□□ -0.31
LDLRAD3-201ENST00000315571 MFSD4BQ5TF39 518 aa13.14□□□□□ -0.31
LDLRAD3-201ENST00000315571 ARMCX5Q6P1M9 558 aa13.14□□□□□ -0.31
LDLRAD3-201ENST00000315571 CCT2P78371 535 aaKnown RBP13.14□□□□□ -0.31
LDLRAD3-201ENST00000315571 GRAPQ13588 217 aa13.14□□□□□ -0.31
LDLRAD3-201ENST00000315571 CAPRIN2Q6IMN6 1127 aaKnown RBP13.14□□□□□ -0.31
LDLRAD3-201ENST00000315571 SRGAP1Q7Z6B7 1085 aa13.14□□□□□ -0.31
LDLRAD3-201ENST00000315571 GRAPLQ8TC17 118 aaPredicted RBP13.14□□□□□ -0.31
LDLRAD3-201ENST00000315571 PPP1R1BQ9UD71 204 aaPredicted RBP13.14□□□□□ -0.31
LDLRAD3-201ENST00000315571 EME2A4GXA9 379 aaPredicted RBP13.14□□□□□ -0.31
LDLRAD3-201ENST00000315571 DBN1Q16643 649 aa13.14□□□□□ -0.31
LDLRAD3-201ENST00000315571 KAT14Q9H8E8 782 aa13.14□□□□□ -0.31
LDLRAD3-201ENST00000315571 BSDC1Q9NW68 430 aaPredicted RBP13.14□□□□□ -0.31
LDLRAD3-201ENST00000315571 LAMB2P55268 1798 aa13.13□□□□□ -0.31
LDLRAD3-201ENST00000315571 GOLGA6L10A6NI86 522 aa13.13□□□□□ -0.31
LDLRAD3-201ENST00000315571 NPR1P16066 1061 aa13.13□□□□□ -0.31
LDLRAD3-201ENST00000315571 CHMLP26374 656 aa13.13□□□□□ -0.31
LDLRAD3-201ENST00000315571 KCNB1Q14721 858 aa13.13□□□□□ -0.31
LDLRAD3-201ENST00000315571 SPECC1Q5M775 1068 aa13.13□□□□□ -0.31
LDLRAD3-201ENST00000315571 TRIM74Q86UV6 250 aa13.13□□□□□ -0.31
LDLRAD3-201ENST00000315571 TRIM73Q86UV7 250 aa13.13□□□□□ -0.31
LDLRAD3-201ENST00000315571 NEUROD6Q96NK8 337 aa13.13□□□□□ -0.31
LDLRAD3-201ENST00000315571 HOOK1Q9UJC3 728 aaKnown RBP13.13□□□□□ -0.31
LDLRAD3-201ENST00000315571 MROH5Q6ZUA9 1318 aa13.13□□□□□ -0.31
LDLRAD3-201ENST00000315571 MYH3P11055 1940 aa13.13□□□□□ -0.31
LDLRAD3-201ENST00000315571 ZMYND10O75800 440 aa13.13□□□□□ -0.31
LDLRAD3-201ENST00000315571 TBC1D8BQ0IIM8 1120 aa13.13□□□□□ -0.31
LDLRAD3-201ENST00000315571 SARM1Q6SZW1 724 aa13.13□□□□□ -0.31
LDLRAD3-201ENST00000315571 SH2B1Q9NRF2 756 aaPredicted RBP13.13□□□□□ -0.31
LDLRAD3-201ENST00000315571 OLFM4Q6UX06 510 aa13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 PNMA8AQ86V59 439 aaPredicted RBP13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 HELBQ8NG08 1087 aaPredicted RBP13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 GPATCH3Q96I76 525 aa13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 KLRG2A4D1S0 409 aaPredicted RBP13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 CTAGE9A4FU28 777 aa13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 GOLGA6BA6NDN3 693 aa13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 SMIM24O75264 130 aa13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 MYBL1P10243 752 aa13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 BEND6Q5SZJ8 279 aaPredicted RBP13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 ZNF483Q8TF39 744 aaPredicted RBP13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 MASTLQ96GX5 879 aa13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 CCDC8Q9H0W5 538 aaPredicted RBP13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 EHD4Q9H223 541 aa13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 SRGNP10124 158 aa13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 FANCCQ00597 558 aa13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 SF3A3Q12874 501 aaKnown RBP eCLIP13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 PDCD2Q16342 344 aaPredicted RBP13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 TNNI3KQ59H18 835 aa13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 RUFY3Q7L099 469 aa13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 SMARCC2Q8TAQ2 1214 aa13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 CRAMP1Q96RY5 1269 aa13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 POLD4Q9HCU8 107 aa13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 CHCHD3Q9NX63 227 aaKnown RBP13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 MCM8Q9UJA3 840 aa13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 FPGT-TNNI3KV9GXZ4 949 aa13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 TNRC6CQ9HCJ0 1690 aaKnown RBP13.12□□□□□ -0.31
LDLRAD3-201ENST00000315571 RPS6KA5O75582 802 aa13.11□□□□□ -0.31
LDLRAD3-201ENST00000315571 HMGB1P09429 215 aaKnown RBP13.11□□□□□ -0.31
LDLRAD3-201ENST00000315571 HOXA10P31260 410 aaPredicted RBP13.11□□□□□ -0.31
LDLRAD3-201ENST00000315571 VSNL1P62760 191 aa13.11□□□□□ -0.31
LDLRAD3-201ENST00000315571 PICK1Q9NRD5 415 aa13.11□□□□□ -0.31
LDLRAD3-201ENST00000315571 ARHGAP6O43182 974 aa13.11□□□□□ -0.31
LDLRAD3-201ENST00000315571 ALDH1B1P30837 517 aa13.11□□□□□ -0.31
LDLRAD3-201ENST00000315571 THEMIS2Q5TEJ8 643 aa13.11□□□□□ -0.31
LDLRAD3-201ENST00000315571 CCDC50Q8IVM0 306 aa13.11□□□□□ -0.31
LDLRAD3-201ENST00000315571 EAF2Q96CJ1 260 aaPredicted RBP13.11□□□□□ -0.31
LDLRAD3-201ENST00000315571 NEFHP12036 1026 aa13.11□□□□□ -0.31
LDLRAD3-201ENST00000315571 IRAK1P51617 712 aa13.11□□□□□ -0.31
LDLRAD3-201ENST00000315571 GUCY1B3Q02153 619 aa13.11□□□□□ -0.31
LDLRAD3-201ENST00000315571 CHRNDQ07001 517 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms