RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 KIAA1755Q5JYT7 1200 aa20.36■□□□□ 0.85
HMGCLL1-202ENST00000308161 ZMYM1Q5SVZ6 1142 aa20.36■□□□□ 0.85
HMGCLL1-202ENST00000308161 SIAH1Q8IUQ4 282 aa20.36■□□□□ 0.85
HMGCLL1-202ENST00000308161 NUDT12Q9BQG2 462 aa20.36■□□□□ 0.85
HMGCLL1-202ENST00000308161 NACAP1Q9BZK3 213 aa20.36■□□□□ 0.85
HMGCLL1-202ENST00000308161 GJD2Q9UKL4 321 aa20.36■□□□□ 0.85
HMGCLL1-202ENST00000308161 PATL2C9JE40 543 aaKnown RBP20.35■□□□□ 0.85
HMGCLL1-202ENST00000308161 CNMDO75829 334 aa20.35■□□□□ 0.85
HMGCLL1-202ENST00000308161 GJB1P08034 283 aa20.35■□□□□ 0.85
HMGCLL1-202ENST00000308161 CCNA1P78396 465 aa20.35■□□□□ 0.85
HMGCLL1-202ENST00000308161 PRPF38BQ5VTL8 546 aaKnown RBP20.35■□□□□ 0.85
HMGCLL1-202ENST00000308161 CCDC129Q6ZRS4 1044 aa20.35■□□□□ 0.85
HMGCLL1-202ENST00000308161 GPR142Q7Z601 462 aa20.35■□□□□ 0.85
HMGCLL1-202ENST00000308161 IFNL3Q8IZI9 196 aa20.35■□□□□ 0.85
HMGCLL1-202ENST00000308161 EVI5LQ96CN4 794 aa20.35■□□□□ 0.85
HMGCLL1-202ENST00000308161 SHISA4Q96DD7 197 aa20.35■□□□□ 0.85
HMGCLL1-202ENST00000308161 KANSL2Q9H9L4 492 aa20.35■□□□□ 0.85
HMGCLL1-202ENST00000308161 STAP2Q9UGK3 403 aa20.35■□□□□ 0.85
HMGCLL1-202ENST00000308161 TMX2Q9Y320 296 aa20.35■□□□□ 0.85
HMGCLL1-202ENST00000308161 PRDM1O75626 825 aa20.34■□□□□ 0.85
HMGCLL1-202ENST00000308161 IGHDP01880 384 aa20.34■□□□□ 0.85
HMGCLL1-202ENST00000308161 HMGCRP04035 888 aa20.34■□□□□ 0.85
HMGCLL1-202ENST00000308161 PLEKHH3Q7Z736 793 aa20.34■□□□□ 0.85
HMGCLL1-202ENST00000308161 NKX2-3Q8TAU0 364 aa20.34■□□□□ 0.85
HMGCLL1-202ENST00000308161 SOCS4Q8WXH5 440 aa20.34■□□□□ 0.85
HMGCLL1-202ENST00000308161 DEFB118Q96PH6 123 aa20.34■□□□□ 0.85
HMGCLL1-202ENST00000308161 NAPBQ9H115 298 aa20.34■□□□□ 0.85
HMGCLL1-202ENST00000308161 VCPKMTQ9H867 229 aa20.34■□□□□ 0.85
HMGCLL1-202ENST00000308161 BTBD7Q9P203 1132 aa20.34■□□□□ 0.85
HMGCLL1-202ENST00000308161 FLOT1O75955 427 aa20.33■□□□□ 0.85
HMGCLL1-202ENST00000308161 RASA1P20936 1047 aa20.33■□□□□ 0.85
HMGCLL1-202ENST00000308161 GJA8P48165 433 aa20.33■□□□□ 0.85
HMGCLL1-202ENST00000308161 IRX6P78412 446 aaPredicted RBP20.33■□□□□ 0.85
HMGCLL1-202ENST00000308161 TRIM32Q13049 653 aa20.33■□□□□ 0.85
HMGCLL1-202ENST00000308161 COG2Q14746 738 aa20.33■□□□□ 0.85
HMGCLL1-202ENST00000308161 SMC5Q8IY18 1101 aa20.33■□□□□ 0.85
HMGCLL1-202ENST00000308161 U2AF1L4Q8WU68 220 aaKnown RBP20.33■□□□□ 0.85
HMGCLL1-202ENST00000308161 LPAR1Q92633 364 aa20.33■□□□□ 0.85
HMGCLL1-202ENST00000308161 ROBO3Q96MS0 1386 aa20.33■□□□□ 0.84
HMGCLL1-202ENST00000308161 TRIM6-TRIM34B2RNG4 842 aa20.32■□□□□ 0.84
HMGCLL1-202ENST00000308161 TRIB2Q92519 343 aa20.32■□□□□ 0.84
HMGCLL1-202ENST00000308161 HOXC10Q9NYD6 342 aa20.32■□□□□ 0.84
HMGCLL1-202ENST00000308161 WDR46O15213 610 aaKnown RBP20.31■□□□□ 0.84
HMGCLL1-202ENST00000308161 RGS2P41220 211 aa20.31■□□□□ 0.84
HMGCLL1-202ENST00000308161 PLS1Q14651 629 aa20.31■□□□□ 0.84
HMGCLL1-202ENST00000308161 LBX2Q6XYB7 198 aa20.31■□□□□ 0.84
HMGCLL1-202ENST00000308161 CHD1LQ86WJ1 897 aa20.31■□□□□ 0.84
HMGCLL1-202ENST00000308161 ZNF444Q8N0Y2 327 aaPredicted RBP20.31■□□□□ 0.84
HMGCLL1-202ENST00000308161 RILPL2Q969X0 211 aa20.31■□□□□ 0.84
HMGCLL1-202ENST00000308161 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.31■□□□□ 0.84
HMGCLL1-202ENST00000308161 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.31■□□□□ 0.84
HMGCLL1-202ENST00000308161 ZNF287Q9HBT7 754 aa20.31■□□□□ 0.84
HMGCLL1-202ENST00000308161 GOPCQ9HD26 462 aa20.31■□□□□ 0.84
HMGCLL1-202ENST00000308161 IVNS1ABPQ9Y6Y0 642 aa20.31■□□□□ 0.84
HMGCLL1-202ENST00000308161 PLXNB2O15031 1838 aa20.31■□□□□ 0.84
HMGCLL1-202ENST00000308161 SGPL1O95470 568 aa20.3■□□□□ 0.84
HMGCLL1-202ENST00000308161 TFRCP02786 760 aaKnown RBP20.3■□□□□ 0.84
HMGCLL1-202ENST00000308161 ZKSCAN1P17029 563 aaPredicted RBP20.3■□□□□ 0.84
HMGCLL1-202ENST00000308161 ATG4CQ96DT6 458 aa20.3■□□□□ 0.84
HMGCLL1-202ENST00000308161 SLC3A2P08195 630 aaKnown RBP20.29■□□□□ 0.84
HMGCLL1-202ENST00000308161 DSG3P32926 999 aa20.29■□□□□ 0.84
HMGCLL1-202ENST00000308161 PPARAQ07869 468 aa20.29■□□□□ 0.84
HMGCLL1-202ENST00000308161 CCL14Q16627 93 aa20.29■□□□□ 0.84
HMGCLL1-202ENST00000308161 MORN1Q5T089 497 aa20.29■□□□□ 0.84
HMGCLL1-202ENST00000308161 FAM227BQ96M60 508 aa20.29■□□□□ 0.84
HMGCLL1-202ENST00000308161 HMX1Q9NP08 348 aaPredicted RBP20.29■□□□□ 0.84
HMGCLL1-202ENST00000308161 FBXO28Q9NVF7 368 aa20.29■□□□□ 0.84
HMGCLL1-202ENST00000308161 FARP2O94887 1054 aaPredicted RBP20.28■□□□□ 0.84
HMGCLL1-202ENST00000308161 PRKAR2AP13861 404 aaKnown RBP20.28■□□□□ 0.84
HMGCLL1-202ENST00000308161 NUCB1Q02818 461 aa20.28■□□□□ 0.84
HMGCLL1-202ENST00000308161 PDE4BQ07343 736 aa20.28■□□□□ 0.84
HMGCLL1-202ENST00000308161 MAP2K5Q13163 448 aa20.28■□□□□ 0.84
HMGCLL1-202ENST00000308161 FAM83BQ5T0W9 1011 aa20.28■□□□□ 0.84
HMGCLL1-202ENST00000308161 VPS53Q5VIR6 699 aa20.28■□□□□ 0.84
HMGCLL1-202ENST00000308161 NUP88Q99567 741 aaPredicted RBP20.28■□□□□ 0.84
HMGCLL1-202ENST00000308161 APBA2Q99767 749 aa20.28■□□□□ 0.84
HMGCLL1-202ENST00000308161 MOV10L1Q9BXT6 1211 aaKnown RBP20.28■□□□□ 0.84
HMGCLL1-202ENST00000308161 SPATC1LQ9H0A9 340 aa20.28■□□□□ 0.84
HMGCLL1-202ENST00000308161 PAK6Q9NQU5 681 aaPredicted RBP20.28■□□□□ 0.84
HMGCLL1-202ENST00000308161 CLIP2Q9UDT6 1046 aa20.28■□□□□ 0.84
HMGCLL1-202ENST00000308161 A0A0D9SFI3 127 aa20.27■□□□□ 0.84
HMGCLL1-202ENST00000308161 TSPY3P0CV98 308 aa20.27■□□□□ 0.84
HMGCLL1-202ENST00000308161 TSPY8P0CW00 308 aa20.27■□□□□ 0.84
HMGCLL1-202ENST00000308161 XRCC5P13010 732 aaKnown RBP20.27■□□□□ 0.84
HMGCLL1-202ENST00000308161 PTPREP23469 700 aa20.27■□□□□ 0.84
HMGCLL1-202ENST00000308161 FAM47AQ5JRC9 791 aa20.27■□□□□ 0.84
HMGCLL1-202ENST00000308161 USP6NLQ92738 828 aa20.27■□□□□ 0.84
HMGCLL1-202ENST00000308161 HELLSQ9NRZ9 838 aa20.27■□□□□ 0.84
HMGCLL1-202ENST00000308161 RPTORQ8N122 1335 aa20.27■□□□□ 0.84
HMGCLL1-202ENST00000308161 CTDSPL2Q05D32 466 aa20.27■□□□□ 0.83
HMGCLL1-202ENST00000308161 NMIQ13287 307 aaPredicted RBP20.27■□□□□ 0.83
HMGCLL1-202ENST00000308161 NCAPG2Q86XI2 1143 aa20.27■□□□□ 0.83
HMGCLL1-202ENST00000308161 PLEKHM2Q8IWE5 1019 aa20.27■□□□□ 0.83
HMGCLL1-202ENST00000308161 TRMT44Q8IYL2 757 aaKnown RBP20.27■□□□□ 0.83
HMGCLL1-202ENST00000308161 LRRC47Q8N1G4 583 aaKnown RBP20.27■□□□□ 0.83
HMGCLL1-202ENST00000308161 MB21D1Q8N884 522 aa20.27■□□□□ 0.83
HMGCLL1-202ENST00000308161 CEP95Q96GE4 821 aa20.27■□□□□ 0.83
HMGCLL1-202ENST00000308161 NYAP2Q9P242 653 aa20.27■□□□□ 0.83
HMGCLL1-202ENST00000308161 SLC15A5A6NIM6 579 aa20.26■□□□□ 0.83
HMGCLL1-202ENST00000308161 FOXP2O15409 715 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms