RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 CNTNAP4Q9C0A0 1308 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 ERICH4A6NGS2 130 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 ITGA6P23229 1130 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 HOXA7P31268 230 aaPredicted RBP6.21□□□□□ -1.42
VPS50-202ENST00000305866 PMS1P54277 932 aaKnown RBP6.21□□□□□ -1.42
VPS50-202ENST00000305866 EVX2Q03828 476 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 HLFQ16534 295 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 ZNF827Q17R98 1081 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 ISM2Q6H9L7 571 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 KIF6Q6ZMV9 814 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 TXLNBQ8N3L3 684 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 DDX17Q92841 729 aaKnown RBP6.21□□□□□ -1.42
VPS50-202ENST00000305866 PAGE5Q96GU1 130 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 GREM2Q9H772 168 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 TMOD3Q9NYL9 352 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 TRIM10Q9UDY6 481 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 ANKRD18BA2A2Z9 1011 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 CCDC66A2RUB6 948 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 H3BQV1 296 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 VEGFAP15692 232 aaPredicted RBP6.2□□□□□ -1.42
VPS50-202ENST00000305866 ECHS1P30084 290 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 CDC25AP30304 524 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 FOSBP53539 338 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 CHRNA2Q15822 529 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 SBK1Q52WX2 424 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 MIIPQ5JXC2 388 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 TTC39AQ5SRH9 613 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 SWT1Q5T5J6 900 aaKnown RBP6.2□□□□□ -1.42
VPS50-202ENST00000305866 IFFO2Q5TF58 517 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 DRC7Q8IY82 874 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 CABLES1Q8TDN4 633 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 RIOK1Q9BRS2 568 aaKnown RBP6.2□□□□□ -1.42
VPS50-202ENST00000305866 KRT23Q9C075 422 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 ABHD10Q9NUJ1 306 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 MKRN1Q9UHC7 482 aaKnown RBP6.2□□□□□ -1.42
VPS50-202ENST00000305866 TAOK2Q9UL54 1235 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 WWC3Q9ULE0 1092 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 NENFQ9UMX5 172 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 RRP15Q9Y3B9 282 aaKnown RBP6.2□□□□□ -1.42
VPS50-202ENST00000305866 ORC4O43929 436 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 HSP90B1P14625 803 aaKnown RBP6.2□□□□□ -1.42
VPS50-202ENST00000305866 CASP1P29466 404 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 CASP8Q14790 479 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 TRMT44Q8IYL2 757 aaKnown RBP6.2□□□□□ -1.42
VPS50-202ENST00000305866 CRACR2BQ8N4Y2 399 aaPredicted RBP6.2□□□□□ -1.42
VPS50-202ENST00000305866 MLKLQ8NB16 471 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 WASF1Q92558 559 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 NFE2L3Q9Y4A8 694 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 BTBD18B2RXH4 712 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 ZNF213O14771 459 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 TNFRSF8P28908 595 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 HNRNPH3P31942 346 aaKnown RBP6.2□□□□□ -1.42
VPS50-202ENST00000305866 USP14P54578 494 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 BYSLQ13895 437 aaKnown RBP6.2□□□□□ -1.42
VPS50-202ENST00000305866 DNAJC10Q8IXB1 793 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 CCDC34Q96HJ3 373 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 CDC5LQ99459 802 aaKnown RBP6.2□□□□□ -1.42
VPS50-202ENST00000305866 NAA15Q9BXJ9 866 aaKnown RBP6.2□□□□□ -1.42
VPS50-202ENST00000305866 RNF26Q9BY78 433 aaPredicted RBP6.2□□□□□ -1.42
VPS50-202ENST00000305866 CSRNP2Q9H175 543 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 ASAP1Q9ULH1 1129 aa6.2□□□□□ -1.42
VPS50-202ENST00000305866 GOLGA8BA8MQT2 603 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 TPM1P09493 284 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 EPB41P11171 864 aaKnown RBP6.19□□□□□ -1.42
VPS50-202ENST00000305866 NR5A1Q13285 461 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 SPECC1Q5M775 1068 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 GORABQ5T7V8 394 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 RC3H1Q5TC82 1133 aaKnown RBP6.19□□□□□ -1.42
VPS50-202ENST00000305866 SPATA1Q5VX52 437 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 RAB11FIP4Q86YS3 637 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 CREG2Q8IUH2 290 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 ZSCAN29Q8IWY8 852 aaPredicted RBP6.19□□□□□ -1.42
VPS50-202ENST00000305866 IFNL3Q8IZI9 196 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 SPATA5Q8NB90 893 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 ACRBPQ8NEB7 543 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 CHP1Q99653 195 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 TCP11L1Q9NUJ3 509 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 FAN1Q9Y2M0 1017 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 TARSL2A2RTX5 802 aaKnown RBP6.19□□□□□ -1.42
VPS50-202ENST00000305866 PLSCR1O15162 318 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 PRPF3O43395 683 aaKnown RBP6.19□□□□□ -1.42
VPS50-202ENST00000305866 SMC2O95347 1197 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 PSEN1P49768 467 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 HAND2P61296 217 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 AKNAD1Q5T1N1 836 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 CNNM4Q6P4Q7 775 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 TMCO3Q6UWJ1 677 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 SLC35F6Q8N357 371 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 DAGLBQ8NCG7 672 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 MMS19Q96T76 1030 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 DUSP9Q99956 384 aaKnown RBP6.19□□□□□ -1.42
VPS50-202ENST00000305866 ALG1Q9BT22 464 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 PRDM11Q9NQV5 511 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 SALL4Q9UJQ4 1053 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 TFR2Q9UP52 801 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 SPATA31A5Q5VU36 1347 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 SPATA31A7Q8IWB4 1347 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 PLIN4Q96Q06 1357 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 ZNF532Q9HCE3 1301 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms