RNA–Protein interactions for RNA: ENST00000299518.6

IDH3A-201, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IDH3A, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-201ENST00000299518 CDK11BP21127 795 aaKnown RBP12.74□□□□□ -0.37
IDH3A-201ENST00000299518 SMARCE1Q969G3 411 aa12.74□□□□□ -0.37
IDH3A-201ENST00000299518 MTRQ99707 1265 aa12.74□□□□□ -0.37
IDH3A-201ENST00000299518 UFL1O94874 794 aa12.74□□□□□ -0.37
IDH3A-201ENST00000299518 PPP1R13BQ96KQ4 1090 aa12.74□□□□□ -0.37
IDH3A-201ENST00000299518 IRS2Q9Y4H2 1338 aa12.74□□□□□ -0.37
IDH3A-201ENST00000299518 MTF1Q14872 753 aa12.74□□□□□ -0.37
IDH3A-201ENST00000299518 TTC38Q5R3I4 469 aa12.74□□□□□ -0.37
IDH3A-201ENST00000299518 NYAP1Q6ZVC0 841 aa12.74□□□□□ -0.37
IDH3A-201ENST00000299518 PNMA1Q8ND90 353 aa12.74□□□□□ -0.37
IDH3A-201ENST00000299518 TNFRSF25Q93038 417 aa12.74□□□□□ -0.37
IDH3A-201ENST00000299518 BPIFA3Q9BQP9 254 aa12.74□□□□□ -0.37
IDH3A-201ENST00000299518 DESI2Q9BSY9 194 aa12.74□□□□□ -0.37
IDH3A-201ENST00000299518 OSBPL5Q9H0X9 879 aaPredicted RBP12.74□□□□□ -0.37
IDH3A-201ENST00000299518 FAM237AA0A1B0GTK4 181 aa12.73□□□□□ -0.37
IDH3A-201ENST00000299518 GTF2F1P35269 517 aaKnown RBP eCLIP12.73□□□□□ -0.37
IDH3A-201ENST00000299518 SMTNL1A8MU46 457 aa12.73□□□□□ -0.37
IDH3A-201ENST00000299518 IGSF3O75054 1194 aa12.73□□□□□ -0.37
IDH3A-201ENST00000299518 CCDC112Q8NEF3 446 aa12.73□□□□□ -0.37
IDH3A-201ENST00000299518 SCG2P13521 617 aa12.73□□□□□ -0.37
IDH3A-201ENST00000299518 USP17L2Q6R6M4 530 aa12.73□□□□□ -0.37
IDH3A-201ENST00000299518 PAGE5Q96GU1 130 aa12.73□□□□□ -0.37
IDH3A-201ENST00000299518 PICALMQ13492 652 aa12.73□□□□□ -0.37
IDH3A-201ENST00000299518 C12orf60Q5U649 245 aa12.73□□□□□ -0.37
IDH3A-201ENST00000299518 HEATR3Q7Z4Q2 680 aa12.73□□□□□ -0.37
IDH3A-201ENST00000299518 KLHL34Q8N239 644 aa12.73□□□□□ -0.37
IDH3A-201ENST00000299518 MKRN1Q9UHC7 482 aaKnown RBP12.73□□□□□ -0.37
IDH3A-201ENST00000299518 CUL4BQ13620 913 aa12.72□□□□□ -0.37
IDH3A-201ENST00000299518 KARSQ15046 597 aaKnown RBP12.72□□□□□ -0.37
IDH3A-201ENST00000299518 MEX3CQ5U5Q3 659 aaKnown RBP12.72□□□□□ -0.37
IDH3A-201ENST00000299518 IRX2Q9BZI1 471 aaPredicted RBP12.72□□□□□ -0.37
IDH3A-201ENST00000299518 UBA5Q9GZZ9 404 aa12.72□□□□□ -0.37
IDH3A-201ENST00000299518 TMEM60Q9H2L4 133 aa12.72□□□□□ -0.37
IDH3A-201ENST00000299518 KAT14Q9H8E8 782 aa12.72□□□□□ -0.37
IDH3A-201ENST00000299518 POLLQ9UGP5 575 aa12.72□□□□□ -0.37
IDH3A-201ENST00000299518 NID2Q14112 1375 aa12.72□□□□□ -0.37
IDH3A-201ENST00000299518 IKBKBO14920 756 aa12.72□□□□□ -0.37
IDH3A-201ENST00000299518 FGRP09769 529 aa12.72□□□□□ -0.37
IDH3A-201ENST00000299518 TSPY3P0CV98 308 aa12.72□□□□□ -0.37
IDH3A-201ENST00000299518 TSPY8P0CW00 308 aa12.72□□□□□ -0.37
IDH3A-201ENST00000299518 SARSP49591 514 aaKnown RBP12.72□□□□□ -0.37
IDH3A-201ENST00000299518 MORC3Q14149 939 aa12.72□□□□□ -0.37
IDH3A-201ENST00000299518 INF2Q27J81 1249 aa12.72□□□□□ -0.37
IDH3A-201ENST00000299518 ANKRD2Q9GZV1 360 aa12.72□□□□□ -0.37
IDH3A-201ENST00000299518 TRIM37O94972 964 aa12.72□□□□□ -0.37
IDH3A-201ENST00000299518 TOP1P11387 765 aaKnown RBP12.72□□□□□ -0.37
IDH3A-201ENST00000299518 GRAPQ13588 217 aa12.72□□□□□ -0.37
IDH3A-201ENST00000299518 GRAPLQ8TC17 118 aaPredicted RBP12.72□□□□□ -0.37
IDH3A-201ENST00000299518 EPC1Q9H2F5 836 aa12.72□□□□□ -0.37
IDH3A-201ENST00000299518 PRKCSHP14314 528 aaPredicted RBP12.71□□□□□ -0.37
IDH3A-201ENST00000299518 CCT6AP40227 531 aaKnown RBP12.71□□□□□ -0.37
IDH3A-201ENST00000299518 BTDP43251 543 aa12.71□□□□□ -0.37
IDH3A-201ENST00000299518 SEPT12Q8IYM1 358 aa12.71□□□□□ -0.37
IDH3A-201ENST00000299518 LRRC15Q8TF66 581 aa12.71□□□□□ -0.37
IDH3A-201ENST00000299518 ATP8A2Q9NTI2 1148 aa12.71□□□□□ -0.37
IDH3A-201ENST00000299518 XDHP47989 1333 aa12.71□□□□□ -0.37
IDH3A-201ENST00000299518 C6orf229H3BNL8 230 aa12.71□□□□□ -0.37
IDH3A-201ENST00000299518 FNBP4Q8N3X1 1017 aaPredicted RBP12.71□□□□□ -0.37
IDH3A-201ENST00000299518 RPGRQ92834 1020 aaKnown RBP12.71□□□□□ -0.37
IDH3A-201ENST00000299518 XBP1P17861 261 aa12.71□□□□□ -0.38
IDH3A-201ENST00000299518 TPM4P67936 248 aa12.71□□□□□ -0.38
IDH3A-201ENST00000299518 SHROOM1Q2M3G4 852 aaPredicted RBP12.71□□□□□ -0.38
IDH3A-201ENST00000299518 TOGARAM2Q6ZUX3 1019 aa12.71□□□□□ -0.38
IDH3A-201ENST00000299518 VSTM4Q8IW00 320 aa12.71□□□□□ -0.38
IDH3A-201ENST00000299518 MAD2L2Q9UI95 211 aa12.71□□□□□ -0.38
IDH3A-201ENST00000299518 PCDHAC2Q9Y5I4 1007 aa12.71□□□□□ -0.38
IDH3A-201ENST00000299518 CTIFO43310 598 aaKnown RBP12.7□□□□□ -0.38
IDH3A-201ENST00000299518 ORC4O43929 436 aa12.7□□□□□ -0.38
IDH3A-201ENST00000299518 GYS1P13807 737 aa12.7□□□□□ -0.38
IDH3A-201ENST00000299518 RC3H1Q5TC82 1133 aaKnown RBP12.7□□□□□ -0.38
IDH3A-201ENST00000299518 WWC2Q6AWC2 1192 aa12.7□□□□□ -0.38
IDH3A-201ENST00000299518 GPIHBP1Q8IV16 184 aa12.7□□□□□ -0.38
IDH3A-201ENST00000299518 TMEM47Q9BQJ4 181 aa12.7□□□□□ -0.38
IDH3A-201ENST00000299518 CD209Q9NNX6 404 aa12.7□□□□□ -0.38
IDH3A-201ENST00000299518 ZNF219Q9P2Y4 722 aaPredicted RBP12.7□□□□□ -0.38
IDH3A-201ENST00000299518 GDAQ9Y2T3 454 aa12.7□□□□□ -0.38
IDH3A-201ENST00000299518 DHX8Q14562 1220 aaKnown RBP12.7□□□□□ -0.38
IDH3A-201ENST00000299518 ELF2Q15723 593 aa12.7□□□□□ -0.38
IDH3A-201ENST00000299518 MFSD14BQ5SR56 506 aa12.7□□□□□ -0.38
IDH3A-201ENST00000299518 PDCL2Q8N4E4 241 aa12.7□□□□□ -0.38
IDH3A-201ENST00000299518 GJA10Q969M2 543 aa12.7□□□□□ -0.38
IDH3A-201ENST00000299518 GJD4Q96KN9 370 aaPredicted RBP12.7□□□□□ -0.38
IDH3A-201ENST00000299518 KCNQ5Q9NR82 932 aa12.7□□□□□ -0.38
IDH3A-201ENST00000299518 ARPP21Q9UBL0 812 aaPredicted RBP12.7□□□□□ -0.38
IDH3A-201ENST00000299518 FRMPD2Q68DX3 1309 aaPredicted RBP12.7□□□□□ -0.38
IDH3A-201ENST00000299518 SERPINB2P05120 415 aa12.7□□□□□ -0.38
IDH3A-201ENST00000299518 DDR1Q08345 913 aa12.7□□□□□ -0.38
IDH3A-201ENST00000299518 PFKFB3Q16875 520 aaPredicted RBP12.7□□□□□ -0.38
IDH3A-201ENST00000299518 DNAI1Q9UI46 699 aa12.7□□□□□ -0.38
IDH3A-201ENST00000299518 CTNND2Q9UQB3 1225 aa12.7□□□□□ -0.38
IDH3A-201ENST00000299518 RASA1P20936 1047 aa12.69□□□□□ -0.38
IDH3A-201ENST00000299518 SCNN1DP51172 638 aa12.69□□□□□ -0.38
IDH3A-201ENST00000299518 TRIM49BA6NDI0 452 aa12.69□□□□□ -0.38
IDH3A-201ENST00000299518 TFRCP02786 760 aaKnown RBP12.69□□□□□ -0.38
IDH3A-201ENST00000299518 ERCC3P19447 782 aa12.69□□□□□ -0.38
IDH3A-201ENST00000299518 GSDMDP57764 484 aa12.69□□□□□ -0.38
IDH3A-201ENST00000299518 GTF2IP78347 998 aa12.69□□□□□ -0.38
IDH3A-201ENST00000299518 DOK7Q18PE1 504 aa12.69□□□□□ -0.38
IDH3A-201ENST00000299518 RTFDC1Q9BY42 306 aaPredicted RBP12.69□□□□□ -0.38
IDH3A-201ENST00000299518 CCDC88AQ3V6T2 1871 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms