RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 MYLK4Q86YV6 388 aaPredicted RBP13.28□□□□□ -0.28
PCF11-201ENST00000298281 MIGA1Q8NAN2 632 aa13.28□□□□□ -0.28
PCF11-201ENST00000298281 MGARPQ8TDB4 240 aa13.28□□□□□ -0.28
PCF11-201ENST00000298281 CFAP36Q96G28 342 aa13.28□□□□□ -0.28
PCF11-201ENST00000298281 NAPGQ99747 312 aaPredicted RBP13.28□□□□□ -0.28
PCF11-201ENST00000298281 PLB1Q6P1J6 1458 aa13.28□□□□□ -0.28
PCF11-201ENST00000298281 POLR3AO14802 1390 aaPredicted RBP13.28□□□□□ -0.28
PCF11-201ENST00000298281 ITSN2Q9NZM3 1697 aa13.28□□□□□ -0.28
PCF11-201ENST00000298281 ARHGEF35A5YM69 484 aa13.28□□□□□ -0.28
PCF11-201ENST00000298281 HEXIM1O94992 359 aaKnown RBP13.28□□□□□ -0.28
PCF11-201ENST00000298281 C8orf74Q6P047 294 aa13.28□□□□□ -0.28
PCF11-201ENST00000298281 FAM186BQ8IYM0 893 aa13.28□□□□□ -0.28
PCF11-201ENST00000298281 SYCE1Q8N0S2 351 aa13.28□□□□□ -0.28
PCF11-201ENST00000298281 SMCR8Q8TEV9 937 aaPredicted RBP13.28□□□□□ -0.28
PCF11-201ENST00000298281 TEX14Q8IWB6 1497 aa13.27□□□□□ -0.28
PCF11-201ENST00000298281 C11orf95C9JLR9 678 aaPredicted RBP13.27□□□□□ -0.28
PCF11-201ENST00000298281 SKAP1Q86WV1 359 aa13.27□□□□□ -0.28
PCF11-201ENST00000298281 MLKLQ8NB16 471 aa13.27□□□□□ -0.28
PCF11-201ENST00000298281 ASIC3Q9UHC3 531 aa13.27□□□□□ -0.28
PCF11-201ENST00000298281 KRT15P19012 456 aa13.27□□□□□ -0.28
PCF11-201ENST00000298281 ECE1P42892 770 aa13.27□□□□□ -0.28
PCF11-201ENST00000298281 PDE4DQ08499 809 aa13.27□□□□□ -0.28
PCF11-201ENST00000298281 CEP85Q6P2H3 762 aa13.27□□□□□ -0.28
PCF11-201ENST00000298281 CLNS1AP54105 237 aaKnown RBP13.27□□□□□ -0.29
PCF11-201ENST00000298281 TRIM50Q86XT4 487 aa13.27□□□□□ -0.29
PCF11-201ENST00000298281 AZI2Q9H6S1 392 aa13.27□□□□□ -0.29
PCF11-201ENST00000298281 PCDHB15Q9Y5E8 787 aa13.27□□□□□ -0.29
PCF11-201ENST00000298281 DISP3Q9P2K9 1392 aa13.27□□□□□ -0.29
PCF11-201ENST00000298281 BCRP11274 1271 aa13.27□□□□□ -0.29
PCF11-201ENST00000298281 CEBPAP49715 358 aaPredicted RBP13.27□□□□□ -0.29
PCF11-201ENST00000298281 ASIC2Q16515 512 aa13.27□□□□□ -0.29
PCF11-201ENST00000298281 VSIG1Q86XK7 387 aa13.27□□□□□ -0.29
PCF11-201ENST00000298281 PDE6BP35913 854 aa13.27□□□□□ -0.29
PCF11-201ENST00000298281 PUM3Q15397 648 aaKnown RBP13.27□□□□□ -0.29
PCF11-201ENST00000298281 HIF1AQ16665 826 aa13.27□□□□□ -0.29
PCF11-201ENST00000298281 ZNF467Q7Z7K2 595 aaPredicted RBP13.27□□□□□ -0.29
PCF11-201ENST00000298281 CCDC84Q86UT8 332 aaPredicted RBP13.27□□□□□ -0.29
PCF11-201ENST00000298281 NFATC2IPQ8NCF5 419 aa13.27□□□□□ -0.29
PCF11-201ENST00000298281 CEP19Q96LK0 163 aa13.27□□□□□ -0.29
PCF11-201ENST00000298281 CCDC138Q96M89 665 aa13.27□□□□□ -0.29
PCF11-201ENST00000298281 A0A1B0GUA9 196 aa13.27□□□□□ -0.29
PCF11-201ENST00000298281 P4HA1P13674 534 aa13.27□□□□□ -0.29
PCF11-201ENST00000298281 IGSF22Q8N9C0 903 aa13.27□□□□□ -0.29
PCF11-201ENST00000298281 ZYXQ15942 572 aaKnown RBP13.26□□□□□ -0.29
PCF11-201ENST00000298281 CHST3Q7LGC8 479 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 ERO1AQ96HE7 468 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 KRT12Q99456 494 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 PLCB1Q9NQ66 1216 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 TRPM2O94759 1503 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 UBAP1LF5GYI3 381 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 PPP2R3AQ06190 1150 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 KHDRBS2Q5VWX1 349 aaKnown RBP13.26□□□□□ -0.29
PCF11-201ENST00000298281 ANGEL1Q9UNK9 670 aaKnown RBP13.26□□□□□ -0.29
PCF11-201ENST00000298281 GRIN2AQ12879 1464 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 PRIM1P49642 420 aaKnown RBP13.26□□□□□ -0.29
PCF11-201ENST00000298281 EIF4A2Q14240 407 aaKnown RBP13.26□□□□□ -0.29
PCF11-201ENST00000298281 SYT10Q6XYQ8 523 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 RAPH1Q70E73 1250 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 C8orf58Q8NAV2 365 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 SMYD2Q9NRG4 433 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 IMPACTQ9P2X3 320 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 SUGT1Q9Y2Z0 365 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 CUTAO60888 179 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 MUM1Q2TAK8 710 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 TRAPPC3LQ5T215 181 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 FNBP4Q8N3X1 1017 aaPredicted RBP13.26□□□□□ -0.29
PCF11-201ENST00000298281 IWS1Q96ST2 819 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 ZRANB1Q9UGI0 708 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 MOSPD1Q9UJG1 213 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 AOX1Q06278 1338 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 FLOT1O75955 427 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 MAP3K21Q5TCX8 1036 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 DUOX2Q9NRD8 1548 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 SERPINI2O75830 405 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 CHMLP26374 656 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 YWHAEP62258 255 aaKnown RBP13.26□□□□□ -0.29
PCF11-201ENST00000298281 TFCP2Q12800 502 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 MCTP2Q6DN12 878 aa13.26□□□□□ -0.29
PCF11-201ENST00000298281 HELBQ8NG08 1087 aaPredicted RBP13.26□□□□□ -0.29
PCF11-201ENST00000298281 IBTKQ9P2D0 1353 aaPredicted RBP13.25□□□□□ -0.29
PCF11-201ENST00000298281 YARSP54577 528 aaKnown RBP13.25□□□□□ -0.29
PCF11-201ENST00000298281 ANGPTL8Q6UXH0 198 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 KRT25Q7Z3Z0 450 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 TTC4O95801 387 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 HOXB7P09629 217 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 TRIM68Q6AZZ1 485 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 NUDCD3Q8IVD9 361 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 CNBD1Q8NA66 436 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 ATP6V1E2Q96A05 226 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 RMDN2Q96LZ7 410 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 TRIM31Q9BZY9 425 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 ST7Q9NRC1 585 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 MBD4O95243 580 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 SCYL2Q6P3W7 929 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 TMTC1Q8IUR5 882 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 CSGALNACT2Q8N6G5 542 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 TEKT1Q969V4 418 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 PLEKHG3A1L390 1219 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 SERPINB6P35237 376 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 ANKRD20A3Q5VUR7 823 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms