RNA–Protein interactions for RNA: ENST00000296181.8

ITGB5-201, Transcript of integrin subunit beta 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB5, Length 4,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-201ENST00000296181 SYCP3Q8IZU3 236 aa20.57■□□□□ 0.88
ITGB5-201ENST00000296181 CCDC155Q8N6L0 562 aa20.57■□□□□ 0.88
ITGB5-201ENST00000296181 WDR24Q96S15 920 aa20.57■□□□□ 0.88
ITGB5-201ENST00000296181 MED4Q9NPJ6 270 aa20.57■□□□□ 0.88
ITGB5-201ENST00000296181 ZSWIM5Q9P217 1185 aa20.57■□□□□ 0.88
ITGB5-201ENST00000296181 RNF40O75150 1001 aa20.57■□□□□ 0.88
ITGB5-201ENST00000296181 TBCAO75347 108 aaKnown RBP20.57■□□□□ 0.88
ITGB5-201ENST00000296181 NBPF14Q5TI25 921 aa20.57■□□□□ 0.88
ITGB5-201ENST00000296181 CCDC25Q86WR0 208 aa20.57■□□□□ 0.88
ITGB5-201ENST00000296181 NBPF5PQ86XG9 351 aaPredicted RBP20.57■□□□□ 0.88
ITGB5-201ENST00000296181 SMARCC2Q8TAQ2 1214 aa20.57■□□□□ 0.88
ITGB5-201ENST00000296181 TBC1D7Q9P0N9 293 aa20.57■□□□□ 0.88
ITGB5-201ENST00000296181 AXIN2Q9Y2T1 843 aa20.57■□□□□ 0.88
ITGB5-201ENST00000296181 CASP8Q14790 479 aa20.57■□□□□ 0.88
ITGB5-201ENST00000296181 DCAF17Q5H9S7 520 aaPredicted RBP20.57■□□□□ 0.88
ITGB5-201ENST00000296181 TMEM110-MUSTN1A8MSY1 372 aa20.57■□□□□ 0.88
ITGB5-201ENST00000296181 FOXN1O15353 648 aa20.57■□□□□ 0.88
ITGB5-201ENST00000296181 BCAMP50895 628 aa20.57■□□□□ 0.88
ITGB5-201ENST00000296181 PAIP2Q9BPZ3 127 aaKnown RBP20.57■□□□□ 0.88
ITGB5-201ENST00000296181 F8W031 263 aaPredicted RBP20.56■□□□□ 0.88
ITGB5-201ENST00000296181 MYO1CO00159 1063 aa20.56■□□□□ 0.88
ITGB5-201ENST00000296181 CEP104O60308 925 aa20.56■□□□□ 0.88
ITGB5-201ENST00000296181 RRP36Q96EU6 259 aaKnown RBP20.56■□□□□ 0.88
ITGB5-201ENST00000296181 FUCA2Q9BTY2 467 aa20.56■□□□□ 0.88
ITGB5-201ENST00000296181 PPANQ9NQ55 473 aaKnown RBP20.56■□□□□ 0.88
ITGB5-201ENST00000296181 HGSO14964 777 aaPredicted RBP20.56■□□□□ 0.88
ITGB5-201ENST00000296181 CRB1P82279 1406 aa20.56■□□□□ 0.88
ITGB5-201ENST00000296181 MRPS25P82663 173 aaKnown RBP20.56■□□□□ 0.88
ITGB5-201ENST00000296181 CCDC91Q7Z6B0 441 aa20.56■□□□□ 0.88
ITGB5-201ENST00000296181 PRKAB2O43741 272 aa20.56■□□□□ 0.88
ITGB5-201ENST00000296181 PICALMQ13492 652 aa20.56■□□□□ 0.88
ITGB5-201ENST00000296181 CAPN7Q9Y6W3 813 aa20.56■□□□□ 0.88
ITGB5-201ENST00000296181 BUB1O43683 1085 aa20.55■□□□□ 0.88
ITGB5-201ENST00000296181 SAP30BPQ9UHR5 308 aaKnown RBP20.55■□□□□ 0.88
ITGB5-201ENST00000296181 CNNM4Q6P4Q7 775 aa20.55■□□□□ 0.88
ITGB5-201ENST00000296181 NLRP3Q96P20 1036 aa20.55■□□□□ 0.88
ITGB5-201ENST00000296181 GSDMAQ96QA5 445 aa20.55■□□□□ 0.88
ITGB5-201ENST00000296181 TMEM132AQ24JP5 1023 aa20.55■□□□□ 0.88
ITGB5-201ENST00000296181 CABS1Q96KC9 395 aa20.55■□□□□ 0.88
ITGB5-201ENST00000296181 MTF1Q14872 753 aa20.55■□□□□ 0.88
ITGB5-201ENST00000296181 CAPS2Q9BXY5 557 aa20.55■□□□□ 0.88
ITGB5-201ENST00000296181 CETN1Q12798 172 aa20.54■□□□□ 0.88
ITGB5-201ENST00000296181 E7EVH7 732 aa20.54■□□□□ 0.88
ITGB5-201ENST00000296181 ARID4AP29374 1257 aaPredicted RBP20.54■□□□□ 0.88
ITGB5-201ENST00000296181 DNM2P50570 870 aa20.54■□□□□ 0.88
ITGB5-201ENST00000296181 CYP27A1Q02318 531 aa20.54■□□□□ 0.88
ITGB5-201ENST00000296181 SLC9C1Q4G0N8 1177 aa20.54■□□□□ 0.88
ITGB5-201ENST00000296181 NELFCDQ8IXH7 590 aa20.54■□□□□ 0.88
ITGB5-201ENST00000296181 RPGRIP1Q96KN7 1286 aa20.54■□□□□ 0.88
ITGB5-201ENST00000296181 GPR108Q9NPR9 543 aa20.54■□□□□ 0.88
ITGB5-201ENST00000296181 ZNF219Q9P2Y4 722 aaPredicted RBP20.54■□□□□ 0.88
ITGB5-201ENST00000296181 PTPRMP28827 1452 aa20.54■□□□□ 0.88
ITGB5-201ENST00000296181 ARHGEF40Q8TER5 1519 aa20.54■□□□□ 0.88
ITGB5-201ENST00000296181 H7C1D1 291 aa20.54■□□□□ 0.88
ITGB5-201ENST00000296181 CFAP221Q4G0U5 840 aa20.54■□□□□ 0.88
ITGB5-201ENST00000296181 CABP7Q86V35 215 aa20.54■□□□□ 0.88
ITGB5-201ENST00000296181 SH2B2O14492 632 aaPredicted RBP20.53■□□□□ 0.88
ITGB5-201ENST00000296181 RPN1P04843 607 aaKnown RBP20.53■□□□□ 0.88
ITGB5-201ENST00000296181 POTEDQ86YR6 584 aa20.53■□□□□ 0.88
ITGB5-201ENST00000296181 ANKS4BQ8N8V4 417 aa20.53■□□□□ 0.88
ITGB5-201ENST00000296181 GPKOWQ92917 476 aaPredicted RBP eCLIP20.53■□□□□ 0.88
ITGB5-201ENST00000296181 SAMM50Q9Y512 469 aa20.53■□□□□ 0.88
ITGB5-201ENST00000296181 SLFN14P0C7P3 912 aa20.53■□□□□ 0.88
ITGB5-201ENST00000296181 CXCR5P32302 372 aa20.53■□□□□ 0.88
ITGB5-201ENST00000296181 INF2Q27J81 1249 aa20.53■□□□□ 0.88
ITGB5-201ENST00000296181 TFCP2L1Q9NZI6 479 aa20.53■□□□□ 0.88
ITGB5-201ENST00000296181 SETBP1Q9Y6X0 1596 aa20.53■□□□□ 0.88
ITGB5-201ENST00000296181 B4DLN1 442 aa20.53■□□□□ 0.88
ITGB5-201ENST00000296181 KIF28PB7ZC32 967 aa20.53■□□□□ 0.88
ITGB5-201ENST00000296181 MMP1P03956 469 aa20.53■□□□□ 0.88
ITGB5-201ENST00000296181 PPP2R5BQ15173 497 aa20.53■□□□□ 0.88
ITGB5-201ENST00000296181 UBE3CQ15386 1083 aa20.53■□□□□ 0.88
ITGB5-201ENST00000296181 ERBB3P21860 1342 aa20.53■□□□□ 0.88
ITGB5-201ENST00000296181 TEX33O43247 280 aa20.53■□□□□ 0.88
ITGB5-201ENST00000296181 PAK2Q13177 524 aa20.53■□□□□ 0.88
ITGB5-201ENST00000296181 GIGYF2Q6Y7W6 1299 aaKnown RBP20.53■□□□□ 0.88
ITGB5-201ENST00000296181 FOXP1Q9H334 677 aaPredicted RBP20.53■□□□□ 0.88
ITGB5-201ENST00000296181 LRWD1Q9UFC0 647 aa20.53■□□□□ 0.88
ITGB5-201ENST00000296181 ABCA9Q8IUA7 1624 aa20.52■□□□□ 0.88
ITGB5-201ENST00000296181 MED23Q9ULK4 1368 aa20.52■□□□□ 0.88
ITGB5-201ENST00000296181 GTPBP6O43824 516 aaPredicted RBP20.52■□□□□ 0.88
ITGB5-201ENST00000296181 PDE8BO95263 885 aa20.52■□□□□ 0.88
ITGB5-201ENST00000296181 CTSWP56202 376 aa20.52■□□□□ 0.88
ITGB5-201ENST00000296181 EIF6P56537 245 aaKnown RBP20.52■□□□□ 0.88
ITGB5-201ENST00000296181 TFAP4Q01664 338 aa20.52■□□□□ 0.88
ITGB5-201ENST00000296181 E2F4Q16254 413 aa20.52■□□□□ 0.88
ITGB5-201ENST00000296181 TRIM58Q8NG06 486 aa20.52■□□□□ 0.88
ITGB5-201ENST00000296181 LMBR1Q8WVP7 490 aa20.52■□□□□ 0.88
ITGB5-201ENST00000296181 VIMP08670 466 aaKnown RBP20.52■□□□□ 0.88
ITGB5-201ENST00000296181 TADA3O75528 432 aa20.52■□□□□ 0.87
ITGB5-201ENST00000296181 IFNAR1P17181 557 aa20.52■□□□□ 0.87
ITGB5-201ENST00000296181 RASGRP4Q8TDF6 673 aa20.52■□□□□ 0.87
ITGB5-201ENST00000296181 FMNL1O95466 1100 aaPredicted RBP20.51■□□□□ 0.87
ITGB5-201ENST00000296181 ADD2P35612 726 aa20.51■□□□□ 0.87
ITGB5-201ENST00000296181 CETN2P41208 172 aa20.51■□□□□ 0.87
ITGB5-201ENST00000296181 CCDC84Q86UT8 332 aaPredicted RBP20.51■□□□□ 0.87
ITGB5-201ENST00000296181 ZSCAN10Q96SZ4 725 aaPredicted RBP20.51■□□□□ 0.87
ITGB5-201ENST00000296181 KIF4AO95239 1232 aa20.51■□□□□ 0.87
ITGB5-201ENST00000296181 ST5P78524 1137 aa20.51■□□□□ 0.87
ITGB5-201ENST00000296181 TSGA10IPQ3SY00 556 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms