RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 HTTP42858 3142 aa20.93■□□□□ 0.94
SEC22C-202ENST00000273156 FGD1P98174 961 aa20.93■□□□□ 0.94
SEC22C-202ENST00000273156 ZNF333Q96JL9 665 aa20.93■□□□□ 0.94
SEC22C-202ENST00000273156 USP17L10C9JJH3 530 aa20.92■□□□□ 0.94
SEC22C-202ENST00000273156 EXOSC10Q01780 885 aaKnown RBP20.92■□□□□ 0.94
SEC22C-202ENST00000273156 TREML2Q5T2D2 321 aa20.92■□□□□ 0.94
SEC22C-202ENST00000273156 SDR42E1Q8WUS8 393 aa20.92■□□□□ 0.94
SEC22C-202ENST00000273156 ATP8A2Q9NTI2 1148 aa20.92■□□□□ 0.94
SEC22C-202ENST00000273156 GDF11O95390 407 aa20.91■□□□□ 0.94
SEC22C-202ENST00000273156 DDIT3P35638 169 aa20.91■□□□□ 0.94
SEC22C-202ENST00000273156 MTMR2Q13614 643 aa20.91■□□□□ 0.94
SEC22C-202ENST00000273156 CERKLQ49MI3 558 aaPredicted RBP20.91■□□□□ 0.94
SEC22C-202ENST00000273156 Q6ZUG5 572 aa20.91■□□□□ 0.94
SEC22C-202ENST00000273156 RAET1EQ8TD07 263 aa20.91■□□□□ 0.94
SEC22C-202ENST00000273156 TCEANC2Q96MN5 208 aa20.91■□□□□ 0.94
SEC22C-202ENST00000273156 CABP5Q9NP86 173 aa20.91■□□□□ 0.94
SEC22C-202ENST00000273156 MCM9Q9NXL9 1143 aa20.91■□□□□ 0.94
SEC22C-202ENST00000273156 MCM5P33992 734 aa20.9■□□□□ 0.94
SEC22C-202ENST00000273156 FAM110CQ1W6H9 321 aa20.9■□□□□ 0.94
SEC22C-202ENST00000273156 SLC4A8Q2Y0W8 1093 aa20.9■□□□□ 0.94
SEC22C-202ENST00000273156 AMOTL1Q8IY63 956 aa20.9■□□□□ 0.94
SEC22C-202ENST00000273156 LARP6Q9BRS8 491 aaKnown RBP20.9■□□□□ 0.94
SEC22C-202ENST00000273156 GH2P01242 217 aa20.89■□□□□ 0.94
SEC22C-202ENST00000273156 HOXA7P31268 230 aaPredicted RBP20.89■□□□□ 0.94
SEC22C-202ENST00000273156 COL9A3Q14050 684 aaPredicted RBP20.89■□□□□ 0.94
SEC22C-202ENST00000273156 TOB2Q14106 344 aaPredicted RBP20.89■□□□□ 0.94
SEC22C-202ENST00000273156 RNF41Q9H4P4 317 aaPredicted RBP20.89■□□□□ 0.94
SEC22C-202ENST00000273156 CNNM2Q9H8M5 875 aa20.89■□□□□ 0.94
SEC22C-202ENST00000273156 MYPNQ86TC9 1320 aa20.89■□□□□ 0.93
SEC22C-202ENST00000273156 IRX3P78415 501 aaPredicted RBP20.89■□□□□ 0.93
SEC22C-202ENST00000273156 ABCB5Q2M3G0 1257 aa20.89■□□□□ 0.93
SEC22C-202ENST00000273156 TBC1D10CQ8IV04 446 aa20.89■□□□□ 0.93
SEC22C-202ENST00000273156 ASCC2Q9H1I8 757 aaPredicted RBP20.89■□□□□ 0.93
SEC22C-202ENST00000273156 DCP1AQ9NPI6 582 aaPredicted RBP20.89■□□□□ 0.93
SEC22C-202ENST00000273156 TPCN1Q9ULQ1 816 aa20.89■□□□□ 0.93
SEC22C-202ENST00000273156 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.89■□□□□ 0.93
SEC22C-202ENST00000273156 WDR19Q8NEZ3 1342 aa20.88■□□□□ 0.93
SEC22C-202ENST00000273156 TNPO2O14787 897 aaKnown RBP20.88■□□□□ 0.93
SEC22C-202ENST00000273156 PLCD1P51178 756 aa20.88■□□□□ 0.93
SEC22C-202ENST00000273156 JAG1P78504 1218 aa20.88■□□□□ 0.93
SEC22C-202ENST00000273156 PPARAQ07869 468 aa20.88■□□□□ 0.93
SEC22C-202ENST00000273156 AKNAD1Q5T1N1 836 aa20.88■□□□□ 0.93
SEC22C-202ENST00000273156 USP17L2Q6R6M4 530 aa20.88■□□□□ 0.93
SEC22C-202ENST00000273156 MFSD6Q6ZSS7 791 aa20.88■□□□□ 0.93
SEC22C-202ENST00000273156 MB21D2Q8IYB1 491 aaPredicted RBP20.88■□□□□ 0.93
SEC22C-202ENST00000273156 FBXL16Q8N461 479 aa20.88■□□□□ 0.93
SEC22C-202ENST00000273156 ANKRD13CQ8N6S4 541 aa20.88■□□□□ 0.93
SEC22C-202ENST00000273156 KRT23Q9C075 422 aa20.88■□□□□ 0.93
SEC22C-202ENST00000273156 NBPF3Q9H094 633 aa20.88■□□□□ 0.93
SEC22C-202ENST00000273156 SWAP70Q9UH65 585 aa20.88■□□□□ 0.93
SEC22C-202ENST00000273156 ANAPC4Q9UJX5 808 aa20.88■□□□□ 0.93
SEC22C-202ENST00000273156 MINDY4BA8MYZ0 360 aa20.87■□□□□ 0.93
SEC22C-202ENST00000273156 CTGFP29279 349 aa20.87■□□□□ 0.93
SEC22C-202ENST00000273156 USP14P54578 494 aa20.87■□□□□ 0.93
SEC22C-202ENST00000273156 CTDSPL2Q05D32 466 aa20.87■□□□□ 0.93
SEC22C-202ENST00000273156 ME3Q16798 604 aa20.87■□□□□ 0.93
SEC22C-202ENST00000273156 GTF3C2Q8WUA4 911 aaPredicted RBP20.87■□□□□ 0.93
SEC22C-202ENST00000273156 STAG1Q8WVM7 1258 aa20.87■□□□□ 0.93
SEC22C-202ENST00000273156 COA7Q96BR5 231 aa20.87■□□□□ 0.93
SEC22C-202ENST00000273156 AGXT2Q9BYV1 514 aa20.87■□□□□ 0.93
SEC22C-202ENST00000273156 FOCADQ5VW36 1801 aa20.87■□□□□ 0.93
SEC22C-202ENST00000273156 PRC1O43663 620 aa20.86■□□□□ 0.93
SEC22C-202ENST00000273156 GRK4P32298 578 aa20.86■□□□□ 0.93
SEC22C-202ENST00000273156 GABPAQ06546 454 aa20.86■□□□□ 0.93
SEC22C-202ENST00000273156 RAB3GAP1Q15042 981 aa20.86■□□□□ 0.93
SEC22C-202ENST00000273156 SLAIN1Q8ND83 568 aa20.86■□□□□ 0.93
SEC22C-202ENST00000273156 BRF1Q92994 677 aa20.86■□□□□ 0.93
SEC22C-202ENST00000273156 FEZ1Q99689 392 aa20.86■□□□□ 0.93
SEC22C-202ENST00000273156 ECM2O94769 699 aaPredicted RBP20.86■□□□□ 0.93
SEC22C-202ENST00000273156 SHMT1P34896 483 aa20.86■□□□□ 0.93
SEC22C-202ENST00000273156 SH3TC2Q8TF17 1288 aa20.86■□□□□ 0.93
SEC22C-202ENST00000273156 LRRC2Q9BYS8 371 aa20.86■□□□□ 0.93
SEC22C-202ENST00000273156 ARPP21Q9UBL0 812 aaPredicted RBP20.86■□□□□ 0.93
SEC22C-202ENST00000273156 PHIPQ8WWQ0 1821 aa20.85■□□□□ 0.93
SEC22C-202ENST00000273156 POTEFA5A3E0 1075 aa20.85■□□□□ 0.93
SEC22C-202ENST00000273156 USP17L12C9JPN9 530 aa20.85■□□□□ 0.93
SEC22C-202ENST00000273156 USP17L21D6R901 530 aa20.85■□□□□ 0.93
SEC22C-202ENST00000273156 PCP11498 1178 aaKnown RBP20.85■□□□□ 0.93
SEC22C-202ENST00000273156 NUCB2P80303 420 aa20.85■□□□□ 0.93
SEC22C-202ENST00000273156 PRKCZQ05513 592 aa20.85■□□□□ 0.93
SEC22C-202ENST00000273156 SBK1Q52WX2 424 aa20.85■□□□□ 0.93
SEC22C-202ENST00000273156 CTR9Q6PD62 1173 aa20.85■□□□□ 0.93
SEC22C-202ENST00000273156 CHST3Q7LGC8 479 aa20.85■□□□□ 0.93
SEC22C-202ENST00000273156 KIAA1683Q9H0B3 1180 aa20.85■□□□□ 0.93
SEC22C-202ENST00000273156 LARGE1O95461 756 aa20.84■□□□□ 0.93
SEC22C-202ENST00000273156 SLC3A2P08195 630 aaKnown RBP20.84■□□□□ 0.93
SEC22C-202ENST00000273156 UBXN2AP68543 259 aa20.84■□□□□ 0.93
SEC22C-202ENST00000273156 IRF5Q13568 498 aa20.84■□□□□ 0.93
SEC22C-202ENST00000273156 CCDC83Q8IWF9 413 aa20.84■□□□□ 0.93
SEC22C-202ENST00000273156 CHMP4CQ96CF2 233 aa20.84■□□□□ 0.93
SEC22C-202ENST00000273156 C12orf42Q96LP6 360 aa20.84■□□□□ 0.93
SEC22C-202ENST00000273156 MORF4L1Q9UBU8 362 aa20.84■□□□□ 0.93
SEC22C-202ENST00000273156 SIPA1L1O43166 1804 aa20.84■□□□□ 0.93
SEC22C-202ENST00000273156 B4E1Z4 1266 aa20.83■□□□□ 0.93
SEC22C-202ENST00000273156 SHROOM1Q2M3G4 852 aaPredicted RBP20.83■□□□□ 0.93
SEC22C-202ENST00000273156 TMEM87BQ96K49 555 aa20.83■□□□□ 0.93
SEC22C-202ENST00000273156 TOMM22Q9NS69 142 aa20.83■□□□□ 0.93
SEC22C-202ENST00000273156 EMILIN3Q9NT22 766 aa20.83■□□□□ 0.93
SEC22C-202ENST00000273156 BIN2Q9UBW5 565 aaPredicted RBP20.83■□□□□ 0.93
SEC22C-202ENST00000273156 CDK5RAP2Q96SN8 1893 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms