RNA–Protein interactions for RNA: ENST00000272930.8

UBE2F-201, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2F, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-201ENST00000272930 BIN1O00499 593 aa23.16■■□□□ 1.3
UBE2F-201ENST00000272930 MMP10P09238 476 aa23.16■■□□□ 1.3
UBE2F-201ENST00000272930 CNNM3Q8NE01 707 aa23.16■■□□□ 1.3
UBE2F-201ENST00000272930 FBXW7Q969H0 707 aa23.16■■□□□ 1.3
UBE2F-201ENST00000272930 MAD2L2Q9UI95 211 aa23.16■■□□□ 1.3
UBE2F-201ENST00000272930 PARP3Q9Y6F1 533 aa23.16■■□□□ 1.3
UBE2F-201ENST00000272930 ATP2B1P20020 1258 aa23.15■■□□□ 1.3
UBE2F-201ENST00000272930 PNOCQ13519 176 aa23.15■■□□□ 1.3
UBE2F-201ENST00000272930 SPECC1Q5M775 1068 aa23.15■■□□□ 1.3
UBE2F-201ENST00000272930 STAG2Q8N3U4 1231 aa23.15■■□□□ 1.3
UBE2F-201ENST00000272930 MASTLQ96GX5 879 aa23.15■■□□□ 1.3
UBE2F-201ENST00000272930 TMEM47Q9BQJ4 181 aa23.15■■□□□ 1.3
UBE2F-201ENST00000272930 ZC3H12CQ9C0D7 883 aaKnown RBP23.15■■□□□ 1.3
UBE2F-201ENST00000272930 SH3GLB2Q9NR46 395 aa23.15■■□□□ 1.3
UBE2F-201ENST00000272930 MDM2Q00987 491 aaPredicted RBP23.15■■□□□ 1.3
UBE2F-201ENST00000272930 NEDD1Q8NHV4 660 aa23.15■■□□□ 1.3
UBE2F-201ENST00000272930 EYA3Q99504 573 aa23.15■■□□□ 1.3
UBE2F-201ENST00000272930 VEGFAP15692 232 aaPredicted RBP23.14■■□□□ 1.29
UBE2F-201ENST00000272930 PTGS1P23219 599 aa23.14■■□□□ 1.29
UBE2F-201ENST00000272930 NLRP5P59047 1200 aa23.14■■□□□ 1.29
UBE2F-201ENST00000272930 CLIP2Q9UDT6 1046 aa23.14■■□□□ 1.29
UBE2F-201ENST00000272930 OLFM4Q6UX06 510 aa23.13■■□□□ 1.29
UBE2F-201ENST00000272930 DPP8Q6V1X1 898 aaPredicted RBP23.13■■□□□ 1.29
UBE2F-201ENST00000272930 DRC7Q8IY82 874 aa23.13■■□□□ 1.29
UBE2F-201ENST00000272930 CERS5Q8N5B7 392 aa23.13■■□□□ 1.29
UBE2F-201ENST00000272930 NAP1L5Q96NT1 182 aaPredicted RBP23.13■■□□□ 1.29
UBE2F-201ENST00000272930 CSRNP2Q9H175 543 aa23.13■■□□□ 1.29
UBE2F-201ENST00000272930 PALM3A6NDB9 673 aaPredicted RBP23.13■■□□□ 1.29
UBE2F-201ENST00000272930 WNT7AO00755 349 aa23.13■■□□□ 1.29
UBE2F-201ENST00000272930 CALML3P27482 149 aa23.13■■□□□ 1.29
UBE2F-201ENST00000272930 TRAPPC10P48553 1259 aa23.13■■□□□ 1.29
UBE2F-201ENST00000272930 NOM1Q5C9Z4 860 aaKnown RBP23.13■■□□□ 1.29
UBE2F-201ENST00000272930 CCDC186Q7Z3E2 898 aa23.13■■□□□ 1.29
UBE2F-201ENST00000272930 FOXP4Q8IVH2 680 aaPredicted RBP23.13■■□□□ 1.29
UBE2F-201ENST00000272930 HOOK1Q9UJC3 728 aaKnown RBP23.13■■□□□ 1.29
UBE2F-201ENST00000272930 STX8Q9UNK0 236 aa23.13■■□□□ 1.29
UBE2F-201ENST00000272930 NOVP48745 357 aa23.12■■□□□ 1.29
UBE2F-201ENST00000272930 NCAPHQ15003 741 aa23.12■■□□□ 1.29
UBE2F-201ENST00000272930 TTC38Q5R3I4 469 aa23.12■■□□□ 1.29
UBE2F-201ENST00000272930 KIAA1524Q8TCG1 905 aa23.12■■□□□ 1.29
UBE2F-201ENST00000272930 FERMT2Q96AC1 680 aa23.12■■□□□ 1.29
UBE2F-201ENST00000272930 SPTLC3Q9NUV7 552 aa23.12■■□□□ 1.29
UBE2F-201ENST00000272930 IKBKBO14920 756 aa23.11■■□□□ 1.29
UBE2F-201ENST00000272930 POLR2DO15514 142 aaKnown RBP23.11■■□□□ 1.29
UBE2F-201ENST00000272930 NOLC1Q14978 699 aaKnown RBP eCLIP23.11■■□□□ 1.29
UBE2F-201ENST00000272930 SLC35G1Q2M3R5 365 aa23.11■■□□□ 1.29
UBE2F-201ENST00000272930 NRBP1Q9UHY1 535 aa23.11■■□□□ 1.29
UBE2F-201ENST00000272930 ADAMTSL1Q8N6G6 1762 aa23.11■■□□□ 1.29
UBE2F-201ENST00000272930 SMTNL1A8MU46 457 aa23.11■■□□□ 1.29
UBE2F-201ENST00000272930 LZTS2Q9BRK4 669 aa23.11■■□□□ 1.29
UBE2F-201ENST00000272930 PCDHA5Q9Y5H7 936 aa23.11■■□□□ 1.29
UBE2F-201ENST00000272930 PLIN4Q96Q06 1357 aa23.1■■□□□ 1.29
UBE2F-201ENST00000272930 CYTH3O43739 400 aa23.1■■□□□ 1.29
UBE2F-201ENST00000272930 ATP2C1P98194 919 aaPredicted RBP23.1■■□□□ 1.29
UBE2F-201ENST00000272930 PYCARDQ9ULZ3 195 aa23.1■■□□□ 1.29
UBE2F-201ENST00000272930 ACTN4O43707 911 aaKnown RBP23.09■■□□□ 1.29
UBE2F-201ENST00000272930 POSTNQ15063 836 aa23.09■■□□□ 1.29
UBE2F-201ENST00000272930 NT5DC1Q5TFE4 455 aa23.09■■□□□ 1.29
UBE2F-201ENST00000272930 USP49Q70CQ1 688 aa23.09■■□□□ 1.29
UBE2F-201ENST00000272930 FAM177A1Q8N128 213 aaPredicted RBP23.09■■□□□ 1.29
UBE2F-201ENST00000272930 SERTAD1Q9UHV2 236 aa23.09■■□□□ 1.29
UBE2F-201ENST00000272930 ZNF646O15015 1829 aaPredicted RBP23.09■■□□□ 1.29
UBE2F-201ENST00000272930 FOXN1O15353 648 aa23.09■■□□□ 1.29
UBE2F-201ENST00000272930 GABPAQ06546 454 aa23.09■■□□□ 1.29
UBE2F-201ENST00000272930 KANK3Q6NY19 840 aa23.09■■□□□ 1.29
UBE2F-201ENST00000272930 PIK3AP1Q6ZUJ8 805 aa23.09■■□□□ 1.29
UBE2F-201ENST00000272930 BLIDQ8IZY5 108 aa23.09■■□□□ 1.29
UBE2F-201ENST00000272930 TMX4Q9H1E5 349 aaPredicted RBP23.09■■□□□ 1.29
UBE2F-201ENST00000272930 PCDHA4Q9UN74 947 aa23.09■■□□□ 1.29
UBE2F-201ENST00000272930 TTF2Q9UNY4 1162 aaKnown RBP23.09■■□□□ 1.29
UBE2F-201ENST00000272930 ADAMTS3O15072 1205 aa23.08■■□□□ 1.29
UBE2F-201ENST00000272930 ZNF174Q15697 407 aa23.08■■□□□ 1.29
UBE2F-201ENST00000272930 CCDC144BQ3MJ40 725 aa23.08■■□□□ 1.29
UBE2F-201ENST00000272930 ISM2Q6H9L7 571 aa23.08■■□□□ 1.29
UBE2F-201ENST00000272930 GPKOWQ92917 476 aaPredicted RBP eCLIP23.08■■□□□ 1.292e-6■■■■■ 37.1
UBE2F-201ENST00000272930 SPZ1Q9BXG8 430 aa23.08■■□□□ 1.29
UBE2F-201ENST00000272930 SLX4Q8IY92 1834 aa23.08■■□□□ 1.28
UBE2F-201ENST00000272930 M0R2N6 131 aa23.08■■□□□ 1.28
UBE2F-201ENST00000272930 TOP1P11387 765 aaKnown RBP23.08■■□□□ 1.28
UBE2F-201ENST00000272930 SARSP49591 514 aaKnown RBP23.08■■□□□ 1.28
UBE2F-201ENST00000272930 TERF1P54274 439 aa23.08■■□□□ 1.28
UBE2F-201ENST00000272930 TPM4P67936 248 aa23.08■■□□□ 1.28
UBE2F-201ENST00000272930 DOK7Q18PE1 504 aa23.08■■□□□ 1.28
UBE2F-201ENST00000272930 TYW1BQ6NUM6 668 aa23.08■■□□□ 1.28
UBE2F-201ENST00000272930 CEP95Q96GE4 821 aa23.08■■□□□ 1.28
UBE2F-201ENST00000272930 F8W031 263 aaPredicted RBP23.07■■□□□ 1.28
UBE2F-201ENST00000272930 PTGDRQ13258 359 aa23.07■■□□□ 1.28
UBE2F-201ENST00000272930 GALNT17Q6IS24 598 aa23.07■■□□□ 1.28
UBE2F-201ENST00000272930 DAGLBQ8NCG7 672 aa23.07■■□□□ 1.28
UBE2F-201ENST00000272930 RXRBP28702 533 aa23.06■■□□□ 1.28
UBE2F-201ENST00000272930 MSL1Q68DK7 614 aa23.06■■□□□ 1.28
UBE2F-201ENST00000272930 WWC2Q6AWC2 1192 aa23.06■■□□□ 1.28
UBE2F-201ENST00000272930 HHIPL2Q6UWX4 724 aa23.06■■□□□ 1.28
UBE2F-201ENST00000272930 C17orf53Q8N3J3 647 aaPredicted RBP23.06■■□□□ 1.28
UBE2F-201ENST00000272930 CCDC148Q8NFR7 591 aa23.06■■□□□ 1.28
UBE2F-201ENST00000272930 BARHL2Q9NY43 387 aa23.06■■□□□ 1.28
UBE2F-201ENST00000272930 KLRF2D3W0D1 207 aa23.06■■□□□ 1.28
UBE2F-201ENST00000272930 BMP6P22004 513 aa23.06■■□□□ 1.28
UBE2F-201ENST00000272930 SMARCA1P28370 1054 aa23.06■■□□□ 1.28
UBE2F-201ENST00000272930 PDILTQ8N807 584 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms