RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 ZSWIM8A7E2V4 1837 aa14.93□□□□□ -0.02
SGCE-201ENST00000265735 LAMA4Q16363 1823 aa14.93□□□□□ -0.02
SGCE-201ENST00000265735 EEF2P13639 858 aaKnown RBP14.93□□□□□ -0.02
SGCE-201ENST00000265735 VCAM1P19320 739 aa14.93□□□□□ -0.02
SGCE-201ENST00000265735 ZYXQ15942 572 aaKnown RBP14.93□□□□□ -0.02
SGCE-201ENST00000265735 OTOP1Q7RTM1 612 aa14.93□□□□□ -0.02
SGCE-201ENST00000265735 SPRYD3Q8NCJ5 442 aa14.93□□□□□ -0.02
SGCE-201ENST00000265735 NEDD1Q8NHV4 660 aa14.93□□□□□ -0.02
SGCE-201ENST00000265735 SMCR8Q8TEV9 937 aaPredicted RBP14.93□□□□□ -0.02
SGCE-201ENST00000265735 CHMP5Q9NZZ3 219 aa14.93□□□□□ -0.02
SGCE-201ENST00000265735 MGAMO43451 1857 aa14.92□□□□□ -0.02
SGCE-201ENST00000265735 HSP90AA1P07900 732 aaKnown RBP14.92□□□□□ -0.02
SGCE-201ENST00000265735 GCLCP48506 637 aaPredicted RBP14.92□□□□□ -0.02
SGCE-201ENST00000265735 NFKBIBQ15653 356 aa14.92□□□□□ -0.02
SGCE-201ENST00000265735 KIAA1755Q5JYT7 1200 aa14.92□□□□□ -0.02
SGCE-201ENST00000265735 IL17RAQ96F46 866 aa14.92□□□□□ -0.02
SGCE-201ENST00000265735 P2RX7Q99572 595 aaKnown RBP14.92□□□□□ -0.02
SGCE-201ENST00000265735 NBPF3Q9H094 633 aa14.92□□□□□ -0.02
SGCE-201ENST00000265735 SH2D4AQ9H788 454 aa14.92□□□□□ -0.02
SGCE-201ENST00000265735 INCENPQ9NQS7 918 aa14.92□□□□□ -0.02
SGCE-201ENST00000265735 NYAP2Q9P242 653 aa14.92□□□□□ -0.02
SGCE-201ENST00000265735 MYH4Q9Y623 1939 aa14.91□□□□□ -0.02
SGCE-201ENST00000265735 USP17L15C9J2P7 530 aa14.91□□□□□ -0.02
SGCE-201ENST00000265735 USP17L13C9JLJ4 530 aa14.91□□□□□ -0.02
SGCE-201ENST00000265735 USP17L11C9JVI0 530 aa14.91□□□□□ -0.02
SGCE-201ENST00000265735 USP17L18D6R9N7 530 aa14.91□□□□□ -0.02
SGCE-201ENST00000265735 USP17L22D6RA61 530 aa14.91□□□□□ -0.02
SGCE-201ENST00000265735 USP17L17D6RBQ6 530 aa14.91□□□□□ -0.02
SGCE-201ENST00000265735 USP17L19D6RCP7 530 aa14.91□□□□□ -0.02
SGCE-201ENST00000265735 USP17L20D6RJB6 530 aa14.91□□□□□ -0.02
SGCE-201ENST00000265735 ORC4O43929 436 aa14.91□□□□□ -0.02
SGCE-201ENST00000265735 CTGFP29279 349 aa14.91□□□□□ -0.02
SGCE-201ENST00000265735 USP17L24Q0WX57 530 aa14.91□□□□□ -0.02
SGCE-201ENST00000265735 FAM110CQ1W6H9 321 aa14.91□□□□□ -0.02
SGCE-201ENST00000265735 CATSPERGQ6ZRH7 1159 aa14.91□□□□□ -0.02
SGCE-201ENST00000265735 LPAR1Q92633 364 aa14.91□□□□□ -0.02
SGCE-201ENST00000265735 VCPKMTQ9H867 229 aa14.91□□□□□ -0.02
SGCE-201ENST00000265735 RLFQ13129 1914 aa14.91□□□□□ -0.02
SGCE-201ENST00000265735 CD2BP2O95400 341 aaKnown RBP14.9□□□□□ -0.02
SGCE-201ENST00000265735 PCP11498 1178 aaKnown RBP14.9□□□□□ -0.02
SGCE-201ENST00000265735 HSPA4P34932 840 aa14.9□□□□□ -0.02
SGCE-201ENST00000265735 HERVK_113P62684 666 aa14.9□□□□□ -0.02
SGCE-201ENST00000265735 IRX3P78415 501 aaPredicted RBP14.9□□□□□ -0.02
SGCE-201ENST00000265735 TFAP4Q01664 338 aa14.9□□□□□ -0.02
SGCE-201ENST00000265735 ARHGEF6Q15052 776 aa14.9□□□□□ -0.02
SGCE-201ENST00000265735 POTEEQ6S8J3 1075 aa14.9□□□□□ -0.02
SGCE-201ENST00000265735 MKL1Q969V6 931 aa14.9□□□□□ -0.02
SGCE-201ENST00000265735 ARHGAP39Q9C0H5 1083 aa14.9□□□□□ -0.02
SGCE-201ENST00000265735 LSG1Q9H089 658 aaKnown RBP14.9□□□□□ -0.02
SGCE-201ENST00000265735 EFCC1Q9HA90 598 aa14.9□□□□□ -0.02
SGCE-201ENST00000265735 MTMR4Q9NYA4 1195 aa14.9□□□□□ -0.02
SGCE-201ENST00000265735 TRIM17Q9Y577 477 aa14.9□□□□□ -0.02
SGCE-201ENST00000265735 PARP14Q460N5 1801 aa14.9□□□□□ -0.02
SGCE-201ENST00000265735 GNRH1P01148 92 aa14.9□□□□□ -0.02
SGCE-201ENST00000265735 TSPY3P0CV98 308 aa14.9□□□□□ -0.02
SGCE-201ENST00000265735 TSPY8P0CW00 308 aa14.9□□□□□ -0.02
SGCE-201ENST00000265735 MCM2P49736 904 aa14.9□□□□□ -0.02
SGCE-201ENST00000265735 KIF22Q14807 665 aa14.9□□□□□ -0.02
SGCE-201ENST00000265735 FAM47AQ5JRC9 791 aa14.9□□□□□ -0.02
SGCE-201ENST00000265735 FBXO46Q6PJ61 603 aaPredicted RBP14.9□□□□□ -0.02
SGCE-201ENST00000265735 ANKRD13CQ8N6S4 541 aa14.9□□□□□ -0.02
SGCE-201ENST00000265735 STAG1Q8WVM7 1258 aa14.9□□□□□ -0.02
SGCE-201ENST00000265735 CEP95Q96GE4 821 aa14.9□□□□□ -0.02
SGCE-201ENST00000265735 RPAP3Q9H6T3 665 aaPredicted RBP14.9□□□□□ -0.02
SGCE-201ENST00000265735 MORF4L1Q9UBU8 362 aa14.9□□□□□ -0.02
SGCE-201ENST00000265735 CIZ1Q9ULV3 898 aaPredicted RBP14.9□□□□□ -0.02
SGCE-201ENST00000265735 SYNPO2Q9UMS6 1093 aa14.9□□□□□ -0.02
SGCE-201ENST00000265735 ZNF213O14771 459 aa14.89□□□□□ -0.03
SGCE-201ENST00000265735 PSMC4P43686 418 aa14.89□□□□□ -0.03
SGCE-201ENST00000265735 NOVP48745 357 aa14.89□□□□□ -0.03
SGCE-201ENST00000265735 HAND2P61296 217 aa14.89□□□□□ -0.03
SGCE-201ENST00000265735 AKNAD1Q5T1N1 836 aa14.89□□□□□ -0.03
SGCE-201ENST00000265735 LBX2Q6XYB7 198 aa14.89□□□□□ -0.03
SGCE-201ENST00000265735 GTF3C2Q8WUA4 911 aaPredicted RBP14.89□□□□□ -0.03
SGCE-201ENST00000265735 ABHD8Q96I13 439 aa14.89□□□□□ -0.03
SGCE-201ENST00000265735 IL17RBQ9NRM6 502 aa14.89□□□□□ -0.03
SGCE-201ENST00000265735 RBPJLQ9UBG7 517 aa14.89□□□□□ -0.03
SGCE-201ENST00000265735 WDR46O15213 610 aaKnown RBP14.88□□□□□ -0.03
SGCE-201ENST00000265735 TTLL1O95922 423 aa14.88□□□□□ -0.03
SGCE-201ENST00000265735 TBC1D10CQ8IV04 446 aa14.88□□□□□ -0.03
SGCE-201ENST00000265735 TRIM47Q96LD4 638 aa14.88□□□□□ -0.03
SGCE-201ENST00000265735 CTNNA3Q9UI47 895 aa14.88□□□□□ -0.03
SGCE-201ENST00000265735 PTPN22Q9Y2R2 807 aa14.88□□□□□ -0.03
SGCE-201ENST00000265735 TSPY2A6NKD2 308 aa14.87□□□□□ -0.03
SGCE-201ENST00000265735 NT5C2P49902 561 aa14.87□□□□□ -0.03
SGCE-201ENST00000265735 NEK4P51957 841 aa14.87□□□□□ -0.03
SGCE-201ENST00000265735 ATP2B2Q01814 1243 aa14.87□□□□□ -0.03
SGCE-201ENST00000265735 COG2Q14746 738 aa14.87□□□□□ -0.03
SGCE-201ENST00000265735 GOPCQ9HD26 462 aa14.87□□□□□ -0.03
SGCE-201ENST00000265735 TXNRD2Q9NNW7 524 aa14.87□□□□□ -0.03
SGCE-201ENST00000265735 CLIP2Q9UDT6 1046 aa14.87□□□□□ -0.03
SGCE-201ENST00000265735 A0A0G2JMZ2 1700 aa14.87□□□□□ -0.03
SGCE-201ENST00000265735 HTTP42858 3142 aa14.87□□□□□ -0.03
SGCE-201ENST00000265735 F5H6K3 240 aa14.87□□□□□ -0.03
SGCE-201ENST00000265735 DDIT3P35638 169 aa14.87□□□□□ -0.03
SGCE-201ENST00000265735 PRMT2P55345 433 aa14.87□□□□□ -0.03
SGCE-201ENST00000265735 PTH1RQ03431 593 aa14.87□□□□□ -0.03
SGCE-201ENST00000265735 KLRC3Q07444 240 aa14.87□□□□□ -0.03
SGCE-201ENST00000265735 IFFO2Q5TF58 517 aa14.87□□□□□ -0.03
SGCE-201ENST00000265735 MFSD6Q6ZSS7 791 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms