RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 PTPAQ15257 358 aa14.77□□□□□ -0.05
NUP54-201ENST00000264883 DDB1Q16531 1140 aa14.77□□□□□ -0.05
NUP54-201ENST00000264883 TTC39AQ5SRH9 613 aa14.77□□□□□ -0.05
NUP54-201ENST00000264883 NBPF14Q5TI25 921 aa14.77□□□□□ -0.05
NUP54-201ENST00000264883 NBPF10Q6P3W6 841 aaKnown RBP14.77□□□□□ -0.05
NUP54-201ENST00000264883 NBPF15Q8N660 670 aa14.77□□□□□ -0.05
NUP54-201ENST00000264883 ACRBPQ8NEB7 543 aa14.77□□□□□ -0.05
NUP54-201ENST00000264883 ENOX1Q8TC92 643 aaKnown RBP14.77□□□□□ -0.05
NUP54-201ENST00000264883 ALG1Q9BT22 464 aa14.77□□□□□ -0.05
NUP54-201ENST00000264883 SELENOOQ9BVL4 669 aa14.77□□□□□ -0.05
NUP54-201ENST00000264883 ASAP1Q9ULH1 1129 aa14.77□□□□□ -0.05
NUP54-201ENST00000264883 A0A1B0GTH6 734 aa14.76□□□□□ -0.05
NUP54-201ENST00000264883 TARSL2A2RTX5 802 aaKnown RBP14.76□□□□□ -0.05
NUP54-201ENST00000264883 TMCO5BA8MYB1 307 aa14.76□□□□□ -0.05
NUP54-201ENST00000264883 NDUFAB1O14561 156 aa14.76□□□□□ -0.05
NUP54-201ENST00000264883 ANTXR2P58335 489 aa14.76□□□□□ -0.05
NUP54-201ENST00000264883 TRIM29Q14134 588 aa14.76□□□□□ -0.05
NUP54-201ENST00000264883 VPS72Q15906 364 aa14.76□□□□□ -0.05
NUP54-201ENST00000264883 WASHC4Q2M389 1173 aa14.76□□□□□ -0.05
NUP54-201ENST00000264883 LONRF3Q496Y0 759 aa14.76□□□□□ -0.05
NUP54-201ENST00000264883 VPS37DQ86XT2 251 aa14.76□□□□□ -0.05
NUP54-201ENST00000264883 SPATS2Q86XZ4 545 aaKnown RBP14.76□□□□□ -0.05
NUP54-201ENST00000264883 TEX11Q8IYF3 940 aa14.76□□□□□ -0.05
NUP54-201ENST00000264883 TRMT44Q8IYL2 757 aaKnown RBP14.76□□□□□ -0.05
NUP54-201ENST00000264883 TRIML1Q8N9V2 468 aa14.76□□□□□ -0.05
NUP54-201ENST00000264883 SAMSN1Q9NSI8 373 aaKnown RBP14.76□□□□□ -0.05
NUP54-201ENST00000264883 ANGEL1Q9UNK9 670 aaKnown RBP14.76□□□□□ -0.05
NUP54-201ENST00000264883 STK36Q9NRP7 1315 aa14.76□□□□□ -0.05
NUP54-201ENST00000264883 A0A0G2JLW4 131 aa14.76□□□□□ -0.05
NUP54-201ENST00000264883 ERCC3P19447 782 aa14.76□□□□□ -0.05
NUP54-201ENST00000264883 ARHGAP25P42331 645 aa14.76□□□□□ -0.05
NUP54-201ENST00000264883 TTC19Q6DKK2 380 aaPredicted RBP14.76□□□□□ -0.05
NUP54-201ENST00000264883 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.76□□□□□ -0.05
NUP54-201ENST00000264883 ATRNO75882 1429 aa14.76□□□□□ -0.05
NUP54-201ENST00000264883 TEX33O43247 280 aa14.75□□□□□ -0.05
NUP54-201ENST00000264883 PAX7P23759 505 aa14.75□□□□□ -0.05
NUP54-201ENST00000264883 METAP2P50579 478 aaKnown RBP eCLIP14.75□□□□□ -0.05
NUP54-201ENST00000264883 IQCA1Q86XH1 822 aa14.75□□□□□ -0.05
NUP54-201ENST00000264883 MLKLQ8NB16 471 aa14.75□□□□□ -0.05
NUP54-201ENST00000264883 RNF217Q8TC41 542 aa14.75□□□□□ -0.05
NUP54-201ENST00000264883 TMEM87BQ96K49 555 aa14.75□□□□□ -0.05
NUP54-201ENST00000264883 MAP3K14Q99558 947 aa14.75□□□□□ -0.05
NUP54-201ENST00000264883 KLC4Q9NSK0 619 aa14.75□□□□□ -0.05
NUP54-201ENST00000264883 RBM28Q9NW13 759 aaKnown RBP14.75□□□□□ -0.05
NUP54-201ENST00000264883 GOLGA8KD6RF30 607 aa14.75□□□□□ -0.05
NUP54-201ENST00000264883 FOXP2O15409 715 aa14.75□□□□□ -0.05
NUP54-201ENST00000264883 MFAP3LO75121 409 aa14.75□□□□□ -0.05
NUP54-201ENST00000264883 ZMYND10O75800 440 aa14.75□□□□□ -0.05
NUP54-201ENST00000264883 PIP4K2AP48426 406 aaPredicted RBP14.75□□□□□ -0.05
NUP54-201ENST00000264883 WLSQ5T9L3 541 aa14.75□□□□□ -0.05
NUP54-201ENST00000264883 KRT40Q6A162 431 aa14.75□□□□□ -0.05
NUP54-201ENST00000264883 FMNL3Q8IVF7 1028 aa14.75□□□□□ -0.05
NUP54-201ENST00000264883 GSPT2Q8IYD1 628 aaKnown RBP14.75□□□□□ -0.05
NUP54-201ENST00000264883 MARCH10Q8NA82 808 aaPredicted RBP14.75□□□□□ -0.05
NUP54-201ENST00000264883 WASF1Q92558 559 aa14.75□□□□□ -0.05
NUP54-201ENST00000264883 SH3GL2Q99962 352 aa14.75□□□□□ -0.05
NUP54-201ENST00000264883 GJB4Q9NTQ9 266 aa14.75□□□□□ -0.05
NUP54-201ENST00000264883 MAN1B1Q9UKM7 699 aa14.75□□□□□ -0.05
NUP54-201ENST00000264883 MYH7P12883 1935 aa14.75□□□□□ -0.05
NUP54-201ENST00000264883 KANK3Q6NY19 840 aa14.74□□□□□ -0.05
NUP54-201ENST00000264883 USP21Q9UK80 565 aa14.74□□□□□ -0.05
NUP54-201ENST00000264883 CCDC9Q9Y3X0 531 aaKnown RBP14.74□□□□□ -0.05
NUP54-201ENST00000264883 FOXN1O15353 648 aa14.74□□□□□ -0.05
NUP54-201ENST00000264883 ATP2B2Q01814 1243 aa14.74□□□□□ -0.05
NUP54-201ENST00000264883 FKBP4Q02790 459 aaKnown RBP eCLIP14.74□□□□□ -0.05
NUP54-201ENST00000264883 CRYMQ14894 314 aa14.74□□□□□ -0.05
NUP54-201ENST00000264883 NT5DC1Q5TFE4 455 aa14.74□□□□□ -0.05
NUP54-201ENST00000264883 CCNI2Q6ZMN8 369 aaPredicted RBP14.74□□□□□ -0.05
NUP54-201ENST00000264883 MICALCLQ6ZW33 695 aa14.74□□□□□ -0.05
NUP54-201ENST00000264883 TRAPPC11Q7Z392 1133 aa14.74□□□□□ -0.05
NUP54-201ENST00000264883 ANKRD18AQ8IVF6 992 aa14.74□□□□□ -0.05
NUP54-201ENST00000264883 KRI1Q8N9T8 703 aaKnown RBP14.74□□□□□ -0.05
NUP54-201ENST00000264883 MMS19Q96T76 1030 aa14.74□□□□□ -0.05
NUP54-201ENST00000264883 NBPF3Q9H094 633 aa14.74□□□□□ -0.05
NUP54-201ENST00000264883 GPHNQ9NQX3 736 aaPredicted RBP14.74□□□□□ -0.05
NUP54-201ENST00000264883 KCNH3Q9ULD8 1083 aa14.74□□□□□ -0.05
NUP54-201ENST00000264883 A6NNZ2 444 aa14.73□□□□□ -0.05
NUP54-201ENST00000264883 MYBL2P10244 700 aa14.73□□□□□ -0.05
NUP54-201ENST00000264883 CASP14P31944 242 aa14.73□□□□□ -0.05
NUP54-201ENST00000264883 MRPL12P52815 198 aaKnown RBP14.73□□□□□ -0.05
NUP54-201ENST00000264883 HAND2P61296 217 aa14.73□□□□□ -0.05
NUP54-201ENST00000264883 MAP2K1Q02750 393 aaPredicted RBP14.73□□□□□ -0.05
NUP54-201ENST00000264883 C11orf91Q3C1V1 193 aa14.73□□□□□ -0.05
NUP54-201ENST00000264883 TUBB8Q3ZCM7 444 aa14.73□□□□□ -0.05
NUP54-201ENST00000264883 LRRC24Q50LG9 513 aa14.73□□□□□ -0.05
NUP54-201ENST00000264883 CEP85LQ5SZL2 805 aa14.73□□□□□ -0.05
NUP54-201ENST00000264883 CNGA4Q8IV77 575 aa14.73□□□□□ -0.05
NUP54-201ENST00000264883 SLC24A3Q9HC58 644 aa14.73□□□□□ -0.05
NUP54-201ENST00000264883 SH2B2O14492 632 aaPredicted RBP14.73□□□□□ -0.05
NUP54-201ENST00000264883 SMTNP53814 917 aa14.73□□□□□ -0.05
NUP54-201ENST00000264883 NBPF20Q3BBV1 942 aa14.73□□□□□ -0.05
NUP54-201ENST00000264883 NAIF1Q69YI7 327 aaPredicted RBP14.73□□□□□ -0.05
NUP54-201ENST00000264883 TMTC1Q8IUR5 882 aa14.73□□□□□ -0.05
NUP54-201ENST00000264883 CCDC51Q96ER9 411 aa14.73□□□□□ -0.05
NUP54-201ENST00000264883 WWC3Q9ULE0 1092 aa14.73□□□□□ -0.05
NUP54-201ENST00000264883 AFF2P51816 1311 aa14.72□□□□□ -0.05
NUP54-201ENST00000264883 KAT6BQ8WYB5 2073 aa14.72□□□□□ -0.05
NUP54-201ENST00000264883 A1BGP04217 495 aa14.72□□□□□ -0.05
NUP54-201ENST00000264883 IRX1P78414 480 aaPredicted RBP14.72□□□□□ -0.05
NUP54-201ENST00000264883 SKOR1P84550 965 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms