RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 DDX17Q92841 729 aaKnown RBP16.86■□□□□ 0.29
XRCC1-201ENST00000262887 PAGE5Q96GU1 130 aa16.86■□□□□ 0.29
XRCC1-201ENST00000262887 EPSTI1Q96J88 318 aa16.86■□□□□ 0.29
XRCC1-201ENST00000262887 RPGRIP1Q96KN7 1286 aa16.86■□□□□ 0.29
XRCC1-201ENST00000262887 GSDMAQ96QA5 445 aa16.86■□□□□ 0.29
XRCC1-201ENST00000262887 SELENOOQ9BVL4 669 aa16.86■□□□□ 0.29
XRCC1-201ENST00000262887 MST1RQ04912 1400 aa16.86■□□□□ 0.29
XRCC1-201ENST00000262887 ABCC12Q96J65 1359 aa16.86■□□□□ 0.29
XRCC1-201ENST00000262887 COBLO75128 1261 aa16.86■□□□□ 0.29
XRCC1-201ENST00000262887 LIFRP42702 1097 aa16.86■□□□□ 0.29
XRCC1-201ENST00000262887 PPFIA1Q13136 1202 aa16.86■□□□□ 0.29
XRCC1-201ENST00000262887 CABP5Q9NP86 173 aa16.86■□□□□ 0.29
XRCC1-201ENST00000262887 INCENPQ9NQS7 918 aa16.86■□□□□ 0.29
XRCC1-201ENST00000262887 TBC1D2BQ9UPU7 963 aa16.86■□□□□ 0.29
XRCC1-201ENST00000262887 MYO5AQ9Y4I1 1855 aaKnown RBP16.86■□□□□ 0.29
XRCC1-201ENST00000262887 SHTN1A0MZ66 631 aa16.85■□□□□ 0.29
XRCC1-201ENST00000262887 ZMYND10O75800 440 aa16.85■□□□□ 0.29
XRCC1-201ENST00000262887 NDUFA10O95299 355 aa16.85■□□□□ 0.29
XRCC1-201ENST00000262887 POTEDQ86YR6 584 aa16.85■□□□□ 0.29
XRCC1-201ENST00000262887 BCAS4Q8TDM0 211 aa16.85■□□□□ 0.29
XRCC1-201ENST00000262887 CAPS2Q9BXY5 557 aa16.85■□□□□ 0.29
XRCC1-201ENST00000262887 NLRP2Q9NX02 1062 aa16.85■□□□□ 0.29
XRCC1-201ENST00000262887 EPN1Q9Y6I3 576 aaPredicted RBP16.85■□□□□ 0.29
XRCC1-201ENST00000262887 KIF1AQ12756 1690 aa16.85■□□□□ 0.29
XRCC1-201ENST00000262887 GOLGA6BA6NDN3 693 aa16.85■□□□□ 0.29
XRCC1-201ENST00000262887 ATP1A1P05023 1023 aaKnown RBP16.85■□□□□ 0.29
XRCC1-201ENST00000262887 CKAP4Q07065 602 aaKnown RBP16.85■□□□□ 0.29
XRCC1-201ENST00000262887 SAMD1Q6SPF0 538 aaPredicted RBP16.85■□□□□ 0.29
XRCC1-201ENST00000262887 ANKRD20A12PQ8NF67 263 aa16.85■□□□□ 0.29
XRCC1-201ENST00000262887 CAPZA3Q96KX2 299 aa16.85■□□□□ 0.29
XRCC1-201ENST00000262887 CHP1Q99653 195 aa16.85■□□□□ 0.29
XRCC1-201ENST00000262887 ZBTB3Q9H5J0 574 aa16.85■□□□□ 0.29
XRCC1-201ENST00000262887 HAUS4Q9H6D7 363 aa16.85■□□□□ 0.29
XRCC1-201ENST00000262887 AATFQ9NY61 560 aaKnown RBP eCLIP16.85■□□□□ 0.29
XRCC1-201ENST00000262887 NBPF26B4DH59 902 aa16.84■□□□□ 0.29
XRCC1-201ENST00000262887 PATL2C9JE40 543 aaKnown RBP16.84■□□□□ 0.29
XRCC1-201ENST00000262887 SRGAP2O75044 1071 aa16.84■□□□□ 0.29
XRCC1-201ENST00000262887 INPP5BP32019 993 aa16.84■□□□□ 0.29
XRCC1-201ENST00000262887 DPYDQ12882 1025 aa16.84■□□□□ 0.29
XRCC1-201ENST00000262887 FBXW10Q5XX13 1052 aa16.84■□□□□ 0.29
XRCC1-201ENST00000262887 NBPF10Q6P3W6 841 aaKnown RBP16.84■□□□□ 0.29
XRCC1-201ENST00000262887 CCNI2Q6ZMN8 369 aaPredicted RBP16.84■□□□□ 0.29
XRCC1-201ENST00000262887 SH3RF1Q7Z6J0 888 aa16.84■□□□□ 0.29
XRCC1-201ENST00000262887 GSPT2Q8IYD1 628 aaKnown RBP16.84■□□□□ 0.29
XRCC1-201ENST00000262887 NBPF15Q8N660 670 aa16.84■□□□□ 0.29
XRCC1-201ENST00000262887 CCDC85AQ96PX6 553 aaPredicted RBP16.84■□□□□ 0.29
XRCC1-201ENST00000262887 TAB2Q9NYJ8 693 aa16.84■□□□□ 0.29
XRCC1-201ENST00000262887 LIMA1Q9UHB6 759 aaKnown RBP16.84■□□□□ 0.29
XRCC1-201ENST00000262887 REXO2Q9Y3B8 237 aaKnown RBP16.84■□□□□ 0.29
XRCC1-201ENST00000262887 IDH1O75874 414 aaKnown RBP16.84■□□□□ 0.29
XRCC1-201ENST00000262887 MAP2K2P36507 400 aa16.84■□□□□ 0.29
XRCC1-201ENST00000262887 MCAMP43121 646 aa16.84■□□□□ 0.29
XRCC1-201ENST00000262887 OXER1Q8TDS5 423 aa16.84■□□□□ 0.29
XRCC1-201ENST00000262887 ZSWIM5Q9P217 1185 aa16.84■□□□□ 0.29
XRCC1-201ENST00000262887 DEXIO95424 95 aa16.83■□□□□ 0.29
XRCC1-201ENST00000262887 MYBL2P10244 700 aa16.83■□□□□ 0.29
XRCC1-201ENST00000262887 ATP6V1AP38606 617 aa16.83■□□□□ 0.29
XRCC1-201ENST00000262887 COPB1P53618 953 aaKnown RBP16.83■□□□□ 0.29
XRCC1-201ENST00000262887 RTN1Q16799 776 aa16.83■□□□□ 0.29
XRCC1-201ENST00000262887 PAPD7Q5XG87 772 aaKnown RBP16.83■□□□□ 0.29
XRCC1-201ENST00000262887 KCNV1Q6PIU1 500 aa16.83■□□□□ 0.29
XRCC1-201ENST00000262887 GBP6Q6ZN66 633 aa16.83■□□□□ 0.29
XRCC1-201ENST00000262887 SYMPKQ92797 1274 aaKnown RBP16.83■□□□□ 0.29
XRCC1-201ENST00000262887 EIF3HO15372 352 aaKnown RBP eCLIP16.83■□□□□ 0.28
XRCC1-201ENST00000262887 SPAG1Q07617 926 aa16.83■□□□□ 0.28
XRCC1-201ENST00000262887 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.83■□□□□ 0.28
XRCC1-201ENST00000262887 CMTR1Q8N1G2 835 aaKnown RBP16.83■□□□□ 0.28
XRCC1-201ENST00000262887 CEP120Q8N960 986 aa16.83■□□□□ 0.28
XRCC1-201ENST00000262887 DCAF5Q96JK2 942 aa16.83■□□□□ 0.28
XRCC1-201ENST00000262887 TJP1Q07157 1748 aa16.83■□□□□ 0.28
XRCC1-201ENST00000262887 CCDC122Q5T0U0 273 aa16.83■□□□□ 0.28
XRCC1-201ENST00000262887 CAGE1Q8TC20 777 aa16.83■□□□□ 0.28
XRCC1-201ENST00000262887 EHD4Q9H223 541 aa16.83■□□□□ 0.28
XRCC1-201ENST00000262887 LAMB4A4D0S4 1761 aa16.82■□□□□ 0.28
XRCC1-201ENST00000262887 LRRC10BA6NIK2 292 aa16.82■□□□□ 0.28
XRCC1-201ENST00000262887 TRIM75PA6NK02 468 aa16.82■□□□□ 0.28
XRCC1-201ENST00000262887 CABP4P57796 275 aa16.82■□□□□ 0.28
XRCC1-201ENST00000262887 GNGT1P63211 74 aa16.82■□□□□ 0.28
XRCC1-201ENST00000262887 STAMQ92783 540 aa16.82■□□□□ 0.28
XRCC1-201ENST00000262887 RABEP2Q9H5N1 569 aa16.82■□□□□ 0.28
XRCC1-201ENST00000262887 MYH7P12883 1935 aa16.82■□□□□ 0.28
XRCC1-201ENST00000262887 ZNF532Q9HCE3 1301 aa16.82■□□□□ 0.28
XRCC1-201ENST00000262887 RRAGBQ5VZM2 374 aa16.82■□□□□ 0.28
XRCC1-201ENST00000262887 JAKMIP2Q96AA8 810 aa16.82■□□□□ 0.28
XRCC1-201ENST00000262887 FBXO3Q9UK99 471 aa16.82■□□□□ 0.28
XRCC1-201ENST00000262887 GRIN2DO15399 1336 aa16.82■□□□□ 0.28
XRCC1-201ENST00000262887 ATRNO75882 1429 aa16.82■□□□□ 0.28
XRCC1-201ENST00000262887 TDO2P48775 406 aa16.81■□□□□ 0.28
XRCC1-201ENST00000262887 UBXN1Q04323 297 aa16.81■□□□□ 0.28
XRCC1-201ENST00000262887 CTDSPL2Q05D32 466 aa16.81■□□□□ 0.28
XRCC1-201ENST00000262887 AIDAQ96BJ3 306 aa16.81■□□□□ 0.28
XRCC1-201ENST00000262887 KCNJ18B7U540 433 aa16.81■□□□□ 0.28
XRCC1-201ENST00000262887 KCNJ12Q14500 433 aa16.81■□□□□ 0.28
XRCC1-201ENST00000262887 TTF1Q15361 905 aaPredicted RBP16.81■□□□□ 0.28
XRCC1-201ENST00000262887 UBE3CQ15386 1083 aa16.81■□□□□ 0.28
XRCC1-201ENST00000262887 TCP11X2Q5H9J9 407 aa16.81■□□□□ 0.28
XRCC1-201ENST00000262887 EGFL6Q8IUX8 553 aa16.81■□□□□ 0.28
XRCC1-201ENST00000262887 FAM184BQ9ULE4 1060 aa16.81■□□□□ 0.28
XRCC1-201ENST00000262887 TFR2Q9UP52 801 aa16.81■□□□□ 0.28
XRCC1-201ENST00000262887 CCDC196A0A1B0GTZ2 297 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms