RNA–Protein interactions for RNA: ENST00000262650.10

ITCH-201, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene ITCH, Length 3,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-201ENST00000262650 ZNF69Q9UC07 566 aa6.54□□□□□ -1.36
ITCH-201ENST00000262650 SHTN1A0MZ66 631 aa6.54□□□□□ -1.36
ITCH-201ENST00000262650 FRAT2O75474 233 aaPredicted RBP6.54□□□□□ -1.36
ITCH-201ENST00000262650 CDC27P30260 824 aa6.54□□□□□ -1.36
ITCH-201ENST00000262650 CTHP32929 405 aa6.54□□□□□ -1.36
ITCH-201ENST00000262650 HIRAP54198 1017 aaPredicted RBP6.54□□□□□ -1.36
ITCH-201ENST00000262650 AGAP9Q5VTM2 703 aa6.54□□□□□ -1.36
ITCH-201ENST00000262650 CIAPIN1Q6FI81 312 aa6.54□□□□□ -1.36
ITCH-201ENST00000262650 CTR9Q6PD62 1173 aa6.54□□□□□ -1.36
ITCH-201ENST00000262650 C16orf54Q6UWD8 224 aa6.54□□□□□ -1.36
ITCH-201ENST00000262650 MYRIPQ8NFW9 859 aa6.54□□□□□ -1.36
ITCH-201ENST00000262650 C17orf50Q8WW18 174 aa6.54□□□□□ -1.36
ITCH-201ENST00000262650 NELL2Q99435 816 aa6.54□□□□□ -1.36
ITCH-201ENST00000262650 PPP1R12CQ9BZL4 782 aa6.54□□□□□ -1.36
ITCH-201ENST00000262650 TRMT1Q9NXH9 659 aaKnown RBP6.54□□□□□ -1.36
ITCH-201ENST00000262650 CCP110O43303 1012 aa6.53□□□□□ -1.36
ITCH-201ENST00000262650 PPIP5K2O43314 1243 aa6.53□□□□□ -1.36
ITCH-201ENST00000262650 PPFIA2O75334 1257 aa6.53□□□□□ -1.36
ITCH-201ENST00000262650 CASP2P42575 452 aa6.53□□□□□ -1.36
ITCH-201ENST00000262650 ZNF280AP59817 542 aaPredicted RBP6.53□□□□□ -1.36
ITCH-201ENST00000262650 TRIM29Q14134 588 aa6.53□□□□□ -1.36
ITCH-201ENST00000262650 MRPL58Q14197 206 aaKnown RBP6.53□□□□□ -1.36
ITCH-201ENST00000262650 AOC3Q16853 763 aa6.53□□□□□ -1.36
ITCH-201ENST00000262650 MAP1SQ66K74 1059 aaPredicted RBP6.53□□□□□ -1.36
ITCH-201ENST00000262650 PODNQ7Z5L7 613 aa6.53□□□□□ -1.36
ITCH-201ENST00000262650 SAPCD2Q86UD0 394 aa6.53□□□□□ -1.36
ITCH-201ENST00000262650 SLC51AQ86UW1 340 aa6.53□□□□□ -1.36
ITCH-201ENST00000262650 PRPF38AQ8NAV1 312 aaKnown RBP6.53□□□□□ -1.36
ITCH-201ENST00000262650 GMLQ99445 158 aa6.53□□□□□ -1.36
ITCH-201ENST00000262650 SAGE1Q9NXZ1 904 aa6.53□□□□□ -1.36
ITCH-201ENST00000262650 PPP2R3BQ9Y5P8 575 aa6.53□□□□□ -1.36
ITCH-201ENST00000262650 DDX49Q9Y6V7 483 aaKnown RBP6.53□□□□□ -1.36
ITCH-201ENST00000262650 GMPSP49915 693 aaPredicted RBP6.53□□□□□ -1.36
ITCH-201ENST00000262650 BRD3Q15059 726 aa6.53□□□□□ -1.36
ITCH-201ENST00000262650 SPECC1Q5M775 1068 aa6.53□□□□□ -1.36
ITCH-201ENST00000262650 DPP8Q6V1X1 898 aaPredicted RBP6.53□□□□□ -1.36
ITCH-201ENST00000262650 AIDAQ96BJ3 306 aa6.53□□□□□ -1.36
ITCH-201ENST00000262650 TRIM6Q9C030 488 aaPredicted RBP6.53□□□□□ -1.36
ITCH-201ENST00000262650 RRAGDQ9NQL2 400 aaPredicted RBP6.53□□□□□ -1.36
ITCH-201ENST00000262650 PITPNM2Q9BZ72 1349 aa6.53□□□□□ -1.36
ITCH-201ENST00000262650 COL1A1P02452 1464 aaPredicted RBP6.53□□□□□ -1.36
ITCH-201ENST00000262650 FSD2A1L4K1 749 aa6.53□□□□□ -1.36
ITCH-201ENST00000262650 PCCAP05165 728 aaPredicted RBP6.53□□□□□ -1.36
ITCH-201ENST00000262650 EAPPQ56P03 285 aaPredicted RBP6.53□□□□□ -1.36
ITCH-201ENST00000262650 CCDC158Q5M9N0 1113 aa6.53□□□□□ -1.36
ITCH-201ENST00000262650 ACBD5Q5T8D3 534 aaPredicted RBP6.53□□□□□ -1.36
ITCH-201ENST00000262650 KIAA1614Q5VZ46 1190 aa6.53□□□□□ -1.36
ITCH-201ENST00000262650 C11orf74Q86VG3 221 aa6.53□□□□□ -1.36
ITCH-201ENST00000262650 REM2Q8IYK8 340 aaPredicted RBP6.53□□□□□ -1.36
ITCH-201ENST00000262650 ZBTB38Q8NAP3 1195 aaPredicted RBP6.53□□□□□ -1.36
ITCH-201ENST00000262650 CAPNS2Q96L46 248 aa6.53□□□□□ -1.36
ITCH-201ENST00000262650 FRMD6Q96NE9 622 aa6.53□□□□□ -1.36
ITCH-201ENST00000262650 CAPN10Q9HC96 672 aa6.53□□□□□ -1.36
ITCH-201ENST00000262650 GTPBP10A4D1E9 387 aaKnown RBP6.52□□□□□ -1.37
ITCH-201ENST00000262650 FAM155AB1AL88 458 aaPredicted RBP6.52□□□□□ -1.37
ITCH-201ENST00000262650 TNNI2P48788 182 aa6.52□□□□□ -1.37
ITCH-201ENST00000262650 GEMIN4P57678 1058 aaKnown RBP6.52□□□□□ -1.37
ITCH-201ENST00000262650 SLC7A5Q01650 507 aa6.52□□□□□ -1.37
ITCH-201ENST00000262650 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.52□□□□□ -1.37
ITCH-201ENST00000262650 COBLL1Q53SF7 1204 aa6.52□□□□□ -1.37
ITCH-201ENST00000262650 MTMR14Q8NCE2 650 aa6.52□□□□□ -1.37
ITCH-201ENST00000262650 CCDC191Q8NCU4 936 aa6.52□□□□□ -1.37
ITCH-201ENST00000262650 GABPB2Q8TAK5 448 aaPredicted RBP6.52□□□□□ -1.37
ITCH-201ENST00000262650 SH3TC2Q8TF17 1288 aa6.52□□□□□ -1.37
ITCH-201ENST00000262650 RIC8AQ9NPQ8 531 aa6.52□□□□□ -1.37
ITCH-201ENST00000262650 TMOD4Q9NZQ9 345 aa6.52□□□□□ -1.37
ITCH-201ENST00000262650 PRKAB1Q9Y478 270 aa6.52□□□□□ -1.37
ITCH-201ENST00000262650 N6AMT1Q9Y5N5 214 aa6.52□□□□□ -1.37
ITCH-201ENST00000262650 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.52□□□□□ -1.37
ITCH-201ENST00000262650 FAM177BA6PVY3 158 aa6.52□□□□□ -1.37
ITCH-201ENST00000262650 ORC4O43929 436 aa6.52□□□□□ -1.37
ITCH-201ENST00000262650 CAND2O75155 1236 aa6.52□□□□□ -1.37
ITCH-201ENST00000262650 HNRNPCP07910 306 aaKnown RBP eCLIP6.52□□□□□ -1.376e-7■■□□□ 12.8
ITCH-201ENST00000262650 OAS2P29728 719 aaKnown RBP6.52□□□□□ -1.37
ITCH-201ENST00000262650 NFX1Q12986 1120 aaKnown RBP6.52□□□□□ -1.37
ITCH-201ENST00000262650 FERMT3Q86UX7 667 aa6.52□□□□□ -1.37
ITCH-201ENST00000262650 TAX1BP1Q86VP1 789 aa6.52□□□□□ -1.37
ITCH-201ENST00000262650 TBC1D31Q96DN5 1066 aa6.52□□□□□ -1.37
ITCH-201ENST00000262650 PLA2G12BQ9BX93 195 aa6.52□□□□□ -1.37
ITCH-201ENST00000262650 MBIPQ9NS73 344 aa6.52□□□□□ -1.37
ITCH-201ENST00000262650 POLLQ9UGP5 575 aa6.52□□□□□ -1.37
ITCH-201ENST00000262650 TRMT112Q9UI30 125 aaKnown RBP6.52□□□□□ -1.37
ITCH-201ENST00000262650 TULP2O00295 520 aa6.51□□□□□ -1.37
ITCH-201ENST00000262650 BAIAP3O94812 1187 aa6.51□□□□□ -1.37
ITCH-201ENST00000262650 DNAJA1P31689 397 aaKnown RBP6.51□□□□□ -1.37
ITCH-201ENST00000262650 KCNV1Q6PIU1 500 aa6.51□□□□□ -1.37
ITCH-201ENST00000262650 SYAP1Q96A49 352 aaPredicted RBP6.51□□□□□ -1.37
ITCH-201ENST00000262650 TBC1D32Q96NH3 1257 aa6.51□□□□□ -1.37
ITCH-201ENST00000262650 EYA3Q99504 573 aa6.51□□□□□ -1.37
ITCH-201ENST00000262650 MMTAG2Q9BU76 263 aaKnown RBP6.51□□□□□ -1.37
ITCH-201ENST00000262650 ABCG4Q9H172 646 aa6.51□□□□□ -1.37
ITCH-201ENST00000262650 TBK1Q9UHD2 729 aa6.51□□□□□ -1.37
ITCH-201ENST00000262650 hCG_1984214I3L0E3 225 aa6.51□□□□□ -1.37
ITCH-201ENST00000262650 MYL3P08590 195 aa6.51□□□□□ -1.37
ITCH-201ENST00000262650 HCLS1P14317 486 aaPredicted RBP6.51□□□□□ -1.37
ITCH-201ENST00000262650 SERPINB4P48594 390 aa6.51□□□□□ -1.37
ITCH-201ENST00000262650 LBX1P52954 281 aa6.51□□□□□ -1.37
ITCH-201ENST00000262650 GNAI1P63096 354 aa6.51□□□□□ -1.37
ITCH-201ENST00000262650 TTLL12Q14166 644 aaPredicted RBP6.51□□□□□ -1.37
ITCH-201ENST00000262650 SNX32Q86XE0 403 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms