RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 IGBP1P78318 339 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 NFX1Q12986 1120 aaKnown RBP4.48□□□□□ -1.69
RNF38-201ENST00000259605 TTLL4Q14679 1199 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 SURF1Q15526 300 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 ZNF174Q15697 407 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 TMED8Q6PL24 325 aaPredicted RBP4.48□□□□□ -1.69
RNF38-201ENST00000259605 GSTA5Q7RTV2 222 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 FOXP4Q8IVH2 680 aaPredicted RBP4.48□□□□□ -1.69
RNF38-201ENST00000259605 GOLGA5Q8TBA6 731 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 SELENOOQ9BVL4 669 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 APOL6Q9BWW8 343 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 TBC1D2Q9BYX2 928 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 PCDHB9Q9Y5E1 797 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 PCDHB13Q9Y5F0 798 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 FAM135BQ49AJ0 1406 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 TRIM75PA6NK02 468 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 DYNC1I1O14576 645 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 FIBPO43427 364 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 DDX5P17844 614 aaKnown RBP4.48□□□□□ -1.69
RNF38-201ENST00000259605 SFPQP23246 707 aaKnown RBP eCLIP4.48□□□□□ -1.69
RNF38-201ENST00000259605 IL6STP40189 918 aaPredicted RBP4.48□□□□□ -1.69
RNF38-201ENST00000259605 PLCD1P51178 756 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 TNNC1P63316 161 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 SARNPP82979 210 aaKnown RBP4.48□□□□□ -1.69
RNF38-201ENST00000259605 PRPF4BQ13523 1007 aaKnown RBP4.48□□□□□ -1.69
RNF38-201ENST00000259605 ERCC6LQ2NKX8 1250 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 FBXW10Q5XX13 1052 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 LMBRD2Q68DH5 695 aaPredicted RBP4.48□□□□□ -1.69
RNF38-201ENST00000259605 CES5AQ6NT32 575 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 DSTYKQ6XUX3 929 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 TRIM50Q86XT4 487 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 GPATCH11Q8N954 259 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 PCSK9Q8NBP7 692 aaKnown RBP4.48□□□□□ -1.69
RNF38-201ENST00000259605 CENPHQ9H3R5 247 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 PRKRIP1Q9H875 184 aaPredicted RBP4.48□□□□□ -1.69
RNF38-201ENST00000259605 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.48□□□□□ -1.69
RNF38-201ENST00000259605 STRIP2Q9ULQ0 834 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 PCDHB8Q9UN66 801 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 DNM3Q9UQ16 869 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 IBTKQ9P2D0 1353 aaPredicted RBP4.48□□□□□ -1.69
RNF38-201ENST00000259605 KIAA0754O94854 1291 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 KRT5P13647 590 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 TNNT1P13805 278 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 RGS2P41220 211 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 LIG4P49917 911 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 CKAP4Q07065 602 aaKnown RBP4.48□□□□□ -1.69
RNF38-201ENST00000259605 DEFB115Q30KQ5 88 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 RRAGBQ5VZM2 374 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 KLHL10Q6JEL2 608 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 ARMC6Q6NXE6 501 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 USP17L2Q6R6M4 530 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 DTHD1Q6ZMT9 781 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 CEP68Q76N32 757 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 PODNQ7Z5L7 613 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 SYNE4Q8N205 404 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 NSUN7Q8NE18 718 aaKnown RBP4.48□□□□□ -1.69
RNF38-201ENST00000259605 CCDC110Q8TBZ0 833 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 TIGD1Q96MW7 591 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 TEKT3Q9BXF9 490 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 ANKFY1Q9P2R3 1169 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 FAM184BQ9ULE4 1060 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 MAP3K15Q6ZN16 1313 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 ABCA10Q8WWZ4 1543 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 CHMP2AO43633 222 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 EVI5O60447 810 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 CAND2O75155 1236 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 RPS6KA4O75676 772 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 IFNA8P32881 189 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 KRT2P35908 639 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 ZNF165P49910 485 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 NOGQ13253 232 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 MAP9Q49MG5 647 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 CCDC157Q569K6 752 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 ZNF790Q6PG37 636 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 SESTD1Q86VW0 696 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 FBXO11Q86XK2 927 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 FPGT-TNNI3KV9GXZ4 949 aa4.48□□□□□ -1.69
RNF38-201ENST00000259605 OVOS2A0A0G2JMS6 1433 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 OVOS2A0A0J9YW53 1432 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 OVOS2Q6IE36 1432 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 CLRN2A0PK11 232 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 EIF3CLB5ME19 914 aaKnown RBP4.47□□□□□ -1.69
RNF38-201ENST00000259605 P4HBP07237 508 aaKnown RBP4.47□□□□□ -1.69
RNF38-201ENST00000259605 HOXC6P09630 235 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 CTCFP49711 727 aaPredicted RBP4.47□□□□□ -1.69
RNF38-201ENST00000259605 EPHB1P54762 984 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 CYP4A11Q02928 519 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 MYO1EQ12965 1108 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 VWA3BQ502W6 1294 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 SPECC1Q5M775 1068 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 AKNAD1Q5T1N1 836 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 CCDC102BQ68D86 513 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 CCDC50Q8IVM0 306 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 CCDC63Q8NA47 563 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 SKA2Q8WVK7 121 aaPredicted RBP4.47□□□□□ -1.69
RNF38-201ENST00000259605 NUCKS1Q9H1E3 243 aaKnown RBP4.47□□□□□ -1.69
RNF38-201ENST00000259605 TRIM45Q9H8W5 580 aaPredicted RBP4.47□□□□□ -1.69
RNF38-201ENST00000259605 ANO10Q9NW15 660 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 MTUS1Q9ULD2 1270 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 WIZO95785 1651 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms