RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 IRS2Q9Y4H2 1338 aa11.53□□□□□ -0.56
COPB1-201ENST00000249923 TNRC6CQ9HCJ0 1690 aaKnown RBP11.53□□□□□ -0.56
COPB1-201ENST00000249923 ERICH2A1L162 156 aa11.53□□□□□ -0.56
COPB1-201ENST00000249923 RNF225M0QZC1 329 aaPredicted RBP11.53□□□□□ -0.56
COPB1-201ENST00000249923 KIF2AO00139 706 aaPredicted RBP11.53□□□□□ -0.56
COPB1-201ENST00000249923 ABL1P00519 1130 aa11.53□□□□□ -0.56
COPB1-201ENST00000249923 STX17P56962 302 aa11.53□□□□□ -0.56
COPB1-201ENST00000249923 MECOMQ03112 1051 aa11.53□□□□□ -0.56
COPB1-201ENST00000249923 SLC4A8Q2Y0W8 1093 aa11.53□□□□□ -0.56
COPB1-201ENST00000249923 TEX35Q5T0J7 233 aa11.53□□□□□ -0.56
COPB1-201ENST00000249923 MLKLQ8NB16 471 aa11.53□□□□□ -0.56
COPB1-201ENST00000249923 BRIP1Q9BX63 1249 aa11.53□□□□□ -0.56
COPB1-201ENST00000249923 BSDC1Q9NW68 430 aaPredicted RBP11.53□□□□□ -0.56
COPB1-201ENST00000249923 SOWAHDA6NJG2 315 aa11.52□□□□□ -0.56
COPB1-201ENST00000249923 CBFA2T2O43439 604 aa11.52□□□□□ -0.56
COPB1-201ENST00000249923 TADA3O75528 432 aa11.52□□□□□ -0.56
COPB1-201ENST00000249923 SLFN14P0C7P3 912 aa11.52□□□□□ -0.56
COPB1-201ENST00000249923 SF3B3Q15393 1217 aaKnown RBP11.52□□□□□ -0.56
COPB1-201ENST00000249923 ZNF174Q15697 407 aa11.52□□□□□ -0.56
COPB1-201ENST00000249923 CDKAL1Q5VV42 579 aa11.52□□□□□ -0.56
COPB1-201ENST00000249923 TBC1D9BQ66K14 1250 aa11.52□□□□□ -0.56
COPB1-201ENST00000249923 TMTC2Q8N394 836 aa11.52□□□□□ -0.56
COPB1-201ENST00000249923 BAG1Q99933 345 aaPredicted RBP11.52□□□□□ -0.56
COPB1-201ENST00000249923 FAM205AQ6ZU69 1335 aa11.52□□□□□ -0.56
COPB1-201ENST00000249923 CCDC196A0A1B0GTZ2 297 aa11.52□□□□□ -0.57
COPB1-201ENST00000249923 ARHGAP6O43182 974 aa11.52□□□□□ -0.57
COPB1-201ENST00000249923 KIF20AO95235 890 aa11.52□□□□□ -0.57
COPB1-201ENST00000249923 IFIT1BQ5T764 474 aaKnown RBP11.52□□□□□ -0.57
COPB1-201ENST00000249923 TYW1BQ6NUM6 668 aa11.52□□□□□ -0.57
COPB1-201ENST00000249923 LRRC15Q8TF66 581 aa11.52□□□□□ -0.57
COPB1-201ENST00000249923 UBXN4Q92575 508 aa11.52□□□□□ -0.57
COPB1-201ENST00000249923 TRIM34Q9BYJ4 488 aa11.52□□□□□ -0.57
COPB1-201ENST00000249923 DCP1AQ9NPI6 582 aaPredicted RBP11.52□□□□□ -0.57
COPB1-201ENST00000249923 RNF216Q9NWF9 866 aaPredicted RBP11.52□□□□□ -0.57
COPB1-201ENST00000249923 COL24A1Q17RW2 1714 aa11.52□□□□□ -0.57
COPB1-201ENST00000249923 TRIM75PA6NK02 468 aa11.52□□□□□ -0.57
COPB1-201ENST00000249923 KRT2P35908 639 aa11.52□□□□□ -0.57
COPB1-201ENST00000249923 ARHGAP29Q52LW3 1261 aa11.52□□□□□ -0.57
COPB1-201ENST00000249923 RAD9BQ6WBX8 426 aa11.52□□□□□ -0.57
COPB1-201ENST00000249923 FBXO33Q7Z6M2 555 aa11.52□□□□□ -0.57
COPB1-201ENST00000249923 NOL10Q9BSC4 688 aaKnown RBP11.52□□□□□ -0.57
COPB1-201ENST00000249923 PES1O00541 588 aaKnown RBP11.51□□□□□ -0.57
COPB1-201ENST00000249923 MYO1BO43795 1136 aa11.51□□□□□ -0.57
COPB1-201ENST00000249923 TFRCP02786 760 aaKnown RBP11.51□□□□□ -0.57
COPB1-201ENST00000249923 NEK11Q8NG66 645 aa11.51□□□□□ -0.57
COPB1-201ENST00000249923 TFCP2L1Q9NZI6 479 aa11.51□□□□□ -0.57
COPB1-201ENST00000249923 MAST2Q6P0Q8 1798 aa11.51□□□□□ -0.57
COPB1-201ENST00000249923 MYH8P13535 1937 aa11.51□□□□□ -0.57
COPB1-201ENST00000249923 CDC25AP30304 524 aa11.51□□□□□ -0.57
COPB1-201ENST00000249923 PTGDRQ13258 359 aa11.51□□□□□ -0.57
COPB1-201ENST00000249923 UBE4AQ14139 1066 aa11.51□□□□□ -0.57
COPB1-201ENST00000249923 KLHL10Q6JEL2 608 aa11.51□□□□□ -0.57
COPB1-201ENST00000249923 PDXDC2PQ6P474 469 aa11.51□□□□□ -0.57
COPB1-201ENST00000249923 BICDL1Q6ZP65 573 aa11.51□□□□□ -0.57
COPB1-201ENST00000249923 RASGRP2Q7LDG7 609 aa11.51□□□□□ -0.57
COPB1-201ENST00000249923 ANKRD18AQ8IVF6 992 aa11.51□□□□□ -0.57
COPB1-201ENST00000249923 TRIML1Q8N9V2 468 aa11.51□□□□□ -0.57
COPB1-201ENST00000249923 BLZF1Q9H2G9 400 aa11.51□□□□□ -0.57
COPB1-201ENST00000249923 ADD3Q9UEY8 706 aaKnown RBP11.51□□□□□ -0.57
COPB1-201ENST00000249923 ZNF831Q5JPB2 1677 aa11.51□□□□□ -0.57
COPB1-201ENST00000249923 ZRANB2O95218 330 aaKnown RBP eCLIP11.51□□□□□ -0.571e-7■■□□□ 13.1
COPB1-201ENST00000249923 ATP2C1P98194 919 aaPredicted RBP11.51□□□□□ -0.57
COPB1-201ENST00000249923 DHX37Q8IY37 1157 aaKnown RBP11.51□□□□□ -0.57
COPB1-201ENST00000249923 CARD6Q9BX69 1037 aa11.51□□□□□ -0.57
COPB1-201ENST00000249923 IL17RBQ9NRM6 502 aa11.51□□□□□ -0.57
COPB1-201ENST00000249923 STX10O60499 249 aa11.5□□□□□ -0.57
COPB1-201ENST00000249923 GYS2P54840 703 aa11.5□□□□□ -0.57
COPB1-201ENST00000249923 RBL2Q08999 1139 aa11.5□□□□□ -0.57
COPB1-201ENST00000249923 GRIK5Q16478 980 aa11.5□□□□□ -0.57
COPB1-201ENST00000249923 FCHSD1Q86WN1 690 aa11.5□□□□□ -0.57
COPB1-201ENST00000249923 NUTM2AQ8IVF1 878 aaPredicted RBP11.5□□□□□ -0.57
COPB1-201ENST00000249923 C4orf32Q8N8J7 132 aa11.5□□□□□ -0.57
COPB1-201ENST00000249923 SPATA31A5Q5VU36 1347 aa11.5□□□□□ -0.57
COPB1-201ENST00000249923 SPATA31A7Q8IWB4 1347 aa11.5□□□□□ -0.57
COPB1-201ENST00000249923 ERCC5P28715 1186 aaPredicted RBP11.5□□□□□ -0.57
COPB1-201ENST00000249923 CPLX3Q8WVH0 158 aa11.5□□□□□ -0.57
COPB1-201ENST00000249923 CDC5LQ99459 802 aaKnown RBP11.5□□□□□ -0.57
COPB1-201ENST00000249923 SRP68Q9UHB9 627 aaKnown RBP11.5□□□□□ -0.57
COPB1-201ENST00000249923 MKRN1Q9UHC7 482 aaKnown RBP11.5□□□□□ -0.57
COPB1-201ENST00000249923 SYNRGQ9UMZ2 1314 aa11.5□□□□□ -0.57
COPB1-201ENST00000249923 PHACTR2O75167 634 aa11.5□□□□□ -0.57
COPB1-201ENST00000249923 GYPCP04921 128 aa11.5□□□□□ -0.57
COPB1-201ENST00000249923 FXR1P51114 621 aaKnown RBP eCLIP11.5□□□□□ -0.571e-6■■■■■ 27.7
COPB1-201ENST00000249923 MAP3K9P80192 1104 aa11.5□□□□□ -0.57
COPB1-201ENST00000249923 SASH3O75995 380 aa11.49□□□□□ -0.57
COPB1-201ENST00000249923 SEC31AO94979 1220 aaKnown RBP11.49□□□□□ -0.57
COPB1-201ENST00000249923 KARSQ15046 597 aaKnown RBP11.49□□□□□ -0.57
COPB1-201ENST00000249923 TTC38Q5R3I4 469 aa11.49□□□□□ -0.57
COPB1-201ENST00000249923 PIK3AP1Q6ZUJ8 805 aa11.49□□□□□ -0.57
COPB1-201ENST00000249923 CATIPQ7Z7H3 387 aa11.49□□□□□ -0.57
COPB1-201ENST00000249923 MRFAP1Q9Y605 127 aa11.49□□□□□ -0.57
COPB1-201ENST00000249923 CDK5RAP2Q96SN8 1893 aa11.49□□□□□ -0.57
COPB1-201ENST00000249923 TM4SF1P30408 202 aa11.49□□□□□ -0.57
COPB1-201ENST00000249923 PLA2G4AP47712 749 aa11.49□□□□□ -0.57
COPB1-201ENST00000249923 C10orf67Q8IYJ2 551 aa11.49□□□□□ -0.57
COPB1-201ENST00000249923 STAG2Q8N3U4 1231 aa11.49□□□□□ -0.57
COPB1-201ENST00000249923 RASGRP4Q8TDF6 673 aa11.49□□□□□ -0.57
COPB1-201ENST00000249923 ZCCHC17Q9NP64 241 aaKnown RBP11.49□□□□□ -0.57
COPB1-201ENST00000249923 CCDC88AQ3V6T2 1871 aa11.49□□□□□ -0.57
COPB1-201ENST00000249923 M0R2N6 131 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms