RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 PLS1Q14651 629 aa16.79■□□□□ 0.28
DDX39A-201ENST00000242776 SEPT2Q15019 361 aa16.79■□□□□ 0.28
DDX39A-201ENST00000242776 ARRDC4Q8NCT1 418 aa16.79■□□□□ 0.28
DDX39A-201ENST00000242776 ARHGAP45Q92619 1136 aa16.79■□□□□ 0.28
DDX39A-201ENST00000242776 MOV10L1Q9BXT6 1211 aaKnown RBP16.79■□□□□ 0.28
DDX39A-201ENST00000242776 PLCD1P51178 756 aa16.78■□□□□ 0.28
DDX39A-201ENST00000242776 TTYH1Q9H313 450 aaPredicted RBP16.78■□□□□ 0.28
DDX39A-201ENST00000242776 ANTXR1Q9H6X2 564 aa16.78■□□□□ 0.28
DDX39A-201ENST00000242776 DBNLQ9UJU6 430 aaKnown RBP16.78■□□□□ 0.28
DDX39A-201ENST00000242776 TRIM43BA6NCK2 446 aa16.77■□□□□ 0.28
DDX39A-201ENST00000242776 COBLO75128 1261 aa16.77■□□□□ 0.28
DDX39A-201ENST00000242776 POLR3DP05423 398 aaPredicted RBP16.77■□□□□ 0.28
DDX39A-201ENST00000242776 HOXC6P09630 235 aa16.77■□□□□ 0.28
DDX39A-201ENST00000242776 FOSL2P15408 326 aa16.77■□□□□ 0.28
DDX39A-201ENST00000242776 GUCY1A2P33402 732 aa16.77■□□□□ 0.28
DDX39A-201ENST00000242776 SHMT1P34896 483 aa16.77■□□□□ 0.28
DDX39A-201ENST00000242776 TTC6Q86TZ1 520 aa16.77■□□□□ 0.28
DDX39A-201ENST00000242776 TRIM43Q96BQ3 446 aaPredicted RBP16.77■□□□□ 0.28
DDX39A-201ENST00000242776 GPR108Q9NPR9 543 aa16.77■□□□□ 0.28
DDX39A-201ENST00000242776 MYH8P13535 1937 aa16.77■□□□□ 0.28
DDX39A-201ENST00000242776 CDH23Q9H251 3354 aa16.76■□□□□ 0.27
DDX39A-201ENST00000242776 IPO8O15397 1037 aaKnown RBP16.76■□□□□ 0.27
DDX39A-201ENST00000242776 ERCC3P19447 782 aa16.76■□□□□ 0.27
DDX39A-201ENST00000242776 NCAPG2Q86XI2 1143 aa16.76■□□□□ 0.27
DDX39A-201ENST00000242776 TMEM57Q8N5G2 664 aa16.76■□□□□ 0.27
DDX39A-201ENST00000242776 BCL11AQ9H165 835 aa16.76■□□□□ 0.27
DDX39A-201ENST00000242776 PDLIM7Q9NR12 457 aa16.76■□□□□ 0.27
DDX39A-201ENST00000242776 A0A1W2PRG0 241 aa16.75■□□□□ 0.27
DDX39A-201ENST00000242776 COL11A1P12107 1806 aaPredicted RBP16.75■□□□□ 0.27
DDX39A-201ENST00000242776 POLA2Q14181 598 aa16.75■□□□□ 0.27
DDX39A-201ENST00000242776 FAM47AQ5JRC9 791 aa16.75■□□□□ 0.27
DDX39A-201ENST00000242776 LBX2Q6XYB7 198 aa16.75■□□□□ 0.27
DDX39A-201ENST00000242776 SPATC1LQ9H0A9 340 aa16.75■□□□□ 0.27
DDX39A-201ENST00000242776 EHD4Q9H223 541 aa16.75■□□□□ 0.27
DDX39A-201ENST00000242776 ZNF236Q9UL36 1845 aa16.75■□□□□ 0.27
DDX39A-201ENST00000242776 SEPT4O43236 478 aa16.74■□□□□ 0.27
DDX39A-201ENST00000242776 COG2Q14746 738 aa16.74■□□□□ 0.27
DDX39A-201ENST00000242776 LRRC41Q15345 812 aa16.74■□□□□ 0.27
DDX39A-201ENST00000242776 KIAA1755Q5JYT7 1200 aa16.74■□□□□ 0.27
DDX39A-201ENST00000242776 OLFML2BQ68BL8 750 aa16.74■□□□□ 0.27
DDX39A-201ENST00000242776 CLEC10AQ8IUN9 316 aa16.74■□□□□ 0.27
DDX39A-201ENST00000242776 EAF2Q96CJ1 260 aaPredicted RBP16.74■□□□□ 0.27
DDX39A-201ENST00000242776 ITGB8P26012 769 aa16.73■□□□□ 0.27
DDX39A-201ENST00000242776 ATP8B2P98198 1209 aa16.73■□□□□ 0.27
DDX39A-201ENST00000242776 TLE2Q04725 743 aa16.73■□□□□ 0.27
DDX39A-201ENST00000242776 SPICE1Q8N0Z3 855 aa16.73■□□□□ 0.27
DDX39A-201ENST00000242776 ZNF512BQ96KM6 892 aaPredicted RBP16.73■□□□□ 0.27
DDX39A-201ENST00000242776 RNPC3Q96LT9 517 aaKnown RBP16.73■□□□□ 0.27
DDX39A-201ENST00000242776 PLXNA1Q9UIW2 1896 aa16.73■□□□□ 0.27
DDX39A-201ENST00000242776 A0A0G2JMZ2 1700 aa16.73■□□□□ 0.27
DDX39A-201ENST00000242776 MAGEB6P1A0A0J9YX57 407 aa16.73■□□□□ 0.27
DDX39A-201ENST00000242776 CYP2D6P10635 497 aa16.73■□□□□ 0.27
DDX39A-201ENST00000242776 EPHB4P54760 987 aa16.73■□□□□ 0.27
DDX39A-201ENST00000242776 SMAD3P84022 425 aaKnown RBP16.73■□□□□ 0.27
DDX39A-201ENST00000242776 MAP3K12Q12852 859 aa16.73■□□□□ 0.27
DDX39A-201ENST00000242776 SLC44A5Q8NCS7 719 aa16.73■□□□□ 0.27
DDX39A-201ENST00000242776 SSH3Q8TE77 659 aa16.73■□□□□ 0.27
DDX39A-201ENST00000242776 ATG4CQ96DT6 458 aa16.73■□□□□ 0.27
DDX39A-201ENST00000242776 MCM9Q9NXL9 1143 aa16.73■□□□□ 0.27
DDX39A-201ENST00000242776 HOXC10Q9NYD6 342 aa16.73■□□□□ 0.27
DDX39A-201ENST00000242776 SPTBN5Q9NRC6 3674 aaKnown RBP16.72■□□□□ 0.27
DDX39A-201ENST00000242776 PQBP1O60828 265 aaKnown RBP16.72■□□□□ 0.27
DDX39A-201ENST00000242776 FLOT1O75955 427 aa16.72■□□□□ 0.27
DDX39A-201ENST00000242776 PGK1P00558 417 aa16.72■□□□□ 0.27
DDX39A-201ENST00000242776 IGHA2P01877 340 aa16.72■□□□□ 0.27
DDX39A-201ENST00000242776 LENG1Q96BZ8 264 aaPredicted RBP16.72■□□□□ 0.27
DDX39A-201ENST00000242776 PRDM6Q9NQX0 595 aa16.72■□□□□ 0.27
DDX39A-201ENST00000242776 BAZ2AQ9UIF9 1905 aaKnown RBP16.71■□□□□ 0.27
DDX39A-201ENST00000242776 PARP14Q460N5 1801 aa16.71■□□□□ 0.27
DDX39A-201ENST00000242776 STRNO43815 780 aa16.71■□□□□ 0.27
DDX39A-201ENST00000242776 PGK2P07205 417 aa16.71■□□□□ 0.27
DDX39A-201ENST00000242776 SNX17Q15036 470 aa16.71■□□□□ 0.27
DDX39A-201ENST00000242776 SDR42E1Q8WUS8 393 aa16.71■□□□□ 0.27
DDX39A-201ENST00000242776 PPM1EQ8WY54 764 aa16.71■□□□□ 0.27
DDX39A-201ENST00000242776 MAML3Q96JK9 1138 aa16.71■□□□□ 0.27
DDX39A-201ENST00000242776 RIOK1Q9BRS2 568 aaKnown RBP16.71■□□□□ 0.27
DDX39A-201ENST00000242776 XPNPEP3Q9NQH7 507 aa16.71■□□□□ 0.27
DDX39A-201ENST00000242776 SLC5A4Q9NY91 659 aa16.71■□□□□ 0.27
DDX39A-201ENST00000242776 CLTBP09497 229 aa16.7■□□□□ 0.26
DDX39A-201ENST00000242776 RAG1P15918 1043 aa16.7■□□□□ 0.26
DDX39A-201ENST00000242776 DSG3P32926 999 aa16.7■□□□□ 0.26
DDX39A-201ENST00000242776 AACSQ86V21 672 aa16.7■□□□□ 0.26
DDX39A-201ENST00000242776 USP38Q8NB14 1042 aa16.7■□□□□ 0.26
DDX39A-201ENST00000242776 DYNLL2Q96FJ2 89 aa16.7■□□□□ 0.26
DDX39A-201ENST00000242776 RAD21O60216 631 aa16.69■□□□□ 0.26
DDX39A-201ENST00000242776 FCER1AP12319 257 aa16.69■□□□□ 0.26
DDX39A-201ENST00000242776 TAL1P17542 331 aaPredicted RBP16.69■□□□□ 0.26
DDX39A-201ENST00000242776 GRIN2CQ14957 1233 aa16.69■□□□□ 0.26
DDX39A-201ENST00000242776 CERS3Q8IU89 383 aa16.69■□□□□ 0.26
DDX39A-201ENST00000242776 SHCBP1Q8NEM2 672 aa16.69■□□□□ 0.26
DDX39A-201ENST00000242776 CRNKL1Q9BZJ0 848 aaKnown RBP16.69■□□□□ 0.26
DDX39A-201ENST00000242776 RARBP10826 455 aa16.68■□□□□ 0.26
DDX39A-201ENST00000242776 MS4A1P11836 297 aa16.68■□□□□ 0.26
DDX39A-201ENST00000242776 RRP1P56182 461 aaKnown RBP16.68■□□□□ 0.26
DDX39A-201ENST00000242776 GABPAQ06546 454 aa16.68■□□□□ 0.26
DDX39A-201ENST00000242776 ZKSCAN2Q63HK3 967 aa16.68■□□□□ 0.26
DDX39A-201ENST00000242776 ITPRIPQ8IWB1 547 aa16.68■□□□□ 0.26
DDX39A-201ENST00000242776 MMP19Q99542 508 aa16.68■□□□□ 0.26
DDX39A-201ENST00000242776 MROH8Q9H579 483 aa16.68■□□□□ 0.26
DDX39A-201ENST00000242776 IL1RAPL2Q9NP60 686 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms