RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 PMS1P54277 932 aaKnown RBP11.31□□□□□ -0.6
SLF2-201ENST00000238961 SNX1Q13596 522 aa11.31□□□□□ -0.6
SLF2-201ENST00000238961 CPXCR1Q8N123 301 aa11.31□□□□□ -0.6
SLF2-201ENST00000238961 MAD1L1Q9Y6D9 718 aa11.31□□□□□ -0.6
SLF2-201ENST00000238961 C9orf84Q5VXU9 1444 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 RTL1A6NKG5 1358 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 ARHGEF9O43307 516 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 NECAB1Q8N987 351 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 ARHGEF11O15085 1522 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 CEP104O60308 925 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 ATF7P17544 494 aaPredicted RBP11.3□□□□□ -0.6
SLF2-201ENST00000238961 GCKP35557 465 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 KIAA1841Q6NSI8 718 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 RUFY4Q6ZNE9 571 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 DDX42Q86XP3 938 aaKnown RBP eCLIP11.3□□□□□ -0.6
SLF2-201ENST00000238961 HMG20BQ9P0W2 317 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 MAGED2Q9UNF1 606 aaPredicted RBP11.3□□□□□ -0.6
SLF2-201ENST00000238961 KIF14Q15058 1648 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 SH3BGRP55822 239 aaPredicted RBP11.3□□□□□ -0.6
SLF2-201ENST00000238961 CROCCP2Q86T23 111 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 POTEDQ86YR6 584 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 TMC2Q8TDI7 906 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 BRF1Q92994 677 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 DACH2Q96NX9 599 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 GCNAQ96QF7 691 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 PTPN23Q9H3S7 1636 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 CCNT1O60563 726 aaKnown RBP11.3□□□□□ -0.6
SLF2-201ENST00000238961 MYCP01106 439 aaPredicted RBP11.3□□□□□ -0.6
SLF2-201ENST00000238961 TCF3P15923 654 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 ESRRGP62508 458 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 RINLQ6ZS11 566 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 NYXQ9GZU5 481 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 ZKSCAN5Q9Y2L8 839 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 KIAA0586Q9BVV6 1533 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 SART1O43290 800 aaKnown RBP11.3□□□□□ -0.6
SLF2-201ENST00000238961 TSC22D1Q15714 1073 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 BEND3Q5T5X7 828 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 IWS1Q96ST2 819 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 TRIM4Q9C037 500 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 COPG1Q9Y678 874 aaKnown RBP11.3□□□□□ -0.6
SLF2-201ENST00000238961 GPR162Q16538 588 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 MYCT1Q8N699 235 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.3□□□□□ -0.6
SLF2-201ENST00000238961 IFT122Q9HBG6 1241 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 HACD3Q9P035 362 aa11.3□□□□□ -0.6
SLF2-201ENST00000238961 C11orf95C9JLR9 678 aaPredicted RBP11.29□□□□□ -0.6
SLF2-201ENST00000238961 BCRP11274 1271 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 PDXDC1Q6P996 788 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 NLRP9Q7RTR0 991 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 TAGAPQ8N103 731 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 TAB3Q8N5C8 712 aaPredicted RBP11.29□□□□□ -0.6
SLF2-201ENST00000238961 STAG1Q8WVM7 1258 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 TRPA1O75762 1119 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 LDHBP07195 334 aaKnown RBP11.29□□□□□ -0.6
SLF2-201ENST00000238961 PPP2R5EQ16537 467 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 SNX19Q92543 992 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 GOLGA8QA0A0J9YX86 632 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 GOLGA8OA6NCC3 632 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 GOLGA8NF8WBI6 632 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 SORBS3O60504 671 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 SYT10Q6XYQ8 523 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 KLHDC4Q8TBB5 520 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 UIMC1Q96RL1 719 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 CDCA7Q9BWT1 371 aaPredicted RBP11.29□□□□□ -0.6
SLF2-201ENST00000238961 RIC8AQ9NPQ8 531 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 RAB20Q9NX57 234 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 NIP7Q9Y221 180 aaKnown RBP eCLIP11.29□□□□□ -0.6
SLF2-201ENST00000238961 PDE4DQ08499 809 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 TMED1Q13445 227 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 CSRNP1Q96S65 589 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 ECHDC1Q9NTX5 307 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 SOX5P35711 763 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 ARPP19P56211 112 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 UVSSAQ2YD98 709 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 DNAJC7Q99615 494 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 DNAJC25Q9H1X3 360 aa11.29□□□□□ -0.6
SLF2-201ENST00000238961 DDX41Q9UJV9 622 aaKnown RBP11.29□□□□□ -0.6
SLF2-201ENST00000238961 GCNT3O95395 438 aa11.28□□□□□ -0.6
SLF2-201ENST00000238961 PPP2R3AQ06190 1150 aa11.28□□□□□ -0.6
SLF2-201ENST00000238961 HAUS3Q68CZ6 603 aa11.28□□□□□ -0.6
SLF2-201ENST00000238961 MIGA1Q8NAN2 632 aa11.28□□□□□ -0.6
SLF2-201ENST00000238961 GOLGA5Q8TBA6 731 aa11.28□□□□□ -0.6
SLF2-201ENST00000238961 TEKT1Q969V4 418 aa11.28□□□□□ -0.6
SLF2-201ENST00000238961 SLC12A5Q9H2X9 1139 aa11.28□□□□□ -0.6
SLF2-201ENST00000238961 SCINQ9Y6U3 715 aa11.28□□□□□ -0.6
SLF2-201ENST00000238961 KRT87PA6NCN2 255 aa11.28□□□□□ -0.6
SLF2-201ENST00000238961 APOBRQ0VD83 1088 aa11.28□□□□□ -0.6
SLF2-201ENST00000238961 RSRC2Q7L4I2 434 aaKnown RBP11.28□□□□□ -0.6
SLF2-201ENST00000238961 ZNF654Q8IZM8 581 aa11.28□□□□□ -0.6
SLF2-201ENST00000238961 MAIP1Q8WWC4 291 aa11.28□□□□□ -0.6
SLF2-201ENST00000238961 VWA3AA6NCI4 1184 aa11.28□□□□□ -0.6
SLF2-201ENST00000238961 HSPA8P11142 646 aaKnown RBP11.28□□□□□ -0.6
SLF2-201ENST00000238961 TBC1D8BQ0IIM8 1120 aa11.28□□□□□ -0.6
SLF2-201ENST00000238961 ELMSAN1Q6PJG2 1045 aa11.28□□□□□ -0.6
SLF2-201ENST00000238961 MAN1A2O60476 641 aa11.28□□□□□ -0.6
SLF2-201ENST00000238961 LRMPQ12912 555 aa11.28□□□□□ -0.6
SLF2-201ENST00000238961 HADHQ16836 314 aaKnown RBP11.28□□□□□ -0.6
SLF2-201ENST00000238961 GPIHBP1Q8IV16 184 aa11.28□□□□□ -0.6
SLF2-201ENST00000238961 OTULINQ96BN8 352 aa11.28□□□□□ -0.6
SLF2-201ENST00000238961 NRBF2Q96F24 287 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms