RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 TRIM6Q9C030 488 aaPredicted RBP9.05□□□□□ -0.96
APOB-201ENST00000233242 NCOA5Q9HCD5 579 aaKnown RBP9.05□□□□□ -0.96
APOB-201ENST00000233242 EPS15L1Q9UBC2 864 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 KRT5P13647 590 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 LMNB2Q03252 620 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 LRRC8CQ8TDW0 803 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 GSDMAQ96QA5 445 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 EIF2AQ9BY44 585 aaKnown RBP9.05□□□□□ -0.96
APOB-201ENST00000233242 GUCY2CP25092 1073 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 STAT1P42224 750 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 PNOCQ13519 176 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 GTPBP6O43824 516 aaPredicted RBP9.05□□□□□ -0.96
APOB-201ENST00000233242 SLC4A8Q2Y0W8 1093 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 ANKRD20A4Q4UJ75 823 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 ANKRD20A8PQ5CZ79 823 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 ANKRD20A2Q5SQ80 823 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 ANKRD20A1Q5TYW2 823 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 ZNF804AQ7Z570 1209 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 NLRP7Q8WX94 980 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 KRT12Q99456 494 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 HNRNPH2P55795 449 aaKnown RBP9.04□□□□□ -0.96
APOB-201ENST00000233242 NCBP1Q09161 790 aaKnown RBP9.04□□□□□ -0.96
APOB-201ENST00000233242 CUL1Q13616 776 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 CCDC93Q567U6 631 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 BEND3Q5T5X7 828 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 ABCC4O15439 1325 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 SESN3P58005 492 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 LONRF3Q496Y0 759 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 DTNBP1Q96EV8 351 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 TCOF1Q13428 1488 aaKnown RBP9.04□□□□□ -0.96
APOB-201ENST00000233242 MGARPQ8TDB4 240 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 SAAL1Q96ER3 474 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 CUEDC2Q9H467 287 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 POLR3EQ9NVU0 708 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 EIF3CLB5ME19 914 aaKnown RBP9.04□□□□□ -0.96
APOB-201ENST00000233242 SART1O43290 800 aaKnown RBP9.04□□□□□ -0.96
APOB-201ENST00000233242 BIRC3Q13489 604 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 TNNI3KQ59H18 835 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 EIF3CQ99613 913 aaKnown RBP9.04□□□□□ -0.96
APOB-201ENST00000233242 FAM207AQ9NSI2 230 aaPredicted RBP9.04□□□□□ -0.96
APOB-201ENST00000233242 POLKQ9UBT6 870 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 FPGT-TNNI3KV9GXZ4 949 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 PFDN4Q9NQP4 134 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 GALNT17Q6IS24 598 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 FNBP1Q96RU3 617 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 EFHD1Q9BUP0 239 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 KDM3AQ9Y4C1 1321 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 MAP3K7O43318 606 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 KLHL29Q96CT2 875 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 PARD6BQ9BYG5 372 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 CCDC68Q9H2F9 335 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 RAD51AP2Q09MP3 1159 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 CASP8Q14790 479 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 GLE1Q53GS7 698 aaKnown RBP9.04□□□□□ -0.96
APOB-201ENST00000233242 PIK3AP1Q6ZUJ8 805 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 CACTINQ8WUQ7 758 aaKnown RBP9.04□□□□□ -0.96
APOB-201ENST00000233242 RUBCNQ92622 972 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 FGFR1OP2Q9NVK5 253 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 FANCLQ9NW38 375 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 TNNQ9UQP3 1299 aa9.04□□□□□ -0.96
APOB-201ENST00000233242 BRD2P25440 801 aaKnown RBP9.03□□□□□ -0.96
APOB-201ENST00000233242 EIF4A2Q14240 407 aaKnown RBP9.03□□□□□ -0.96
APOB-201ENST00000233242 PCDHA7Q9UN72 937 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 ADGRL1O94910 1474 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 SHANK2Q9UPX8 1470 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 CHL1O00533 1208 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 KCNK3O14649 394 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 TAF11Q15544 211 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 GEN1Q17RS7 908 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 LETM2Q2VYF4 491 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 OGFOD1Q8N543 542 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 SLC8A3P57103 927 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 GUCY2DQ02846 1103 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 BICC1Q9H694 974 aaKnown RBP9.03□□□□□ -0.96
APOB-201ENST00000233242 DRP2Q13474 957 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 CUL4AQ13619 759 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 C10orf76Q5T2E6 689 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 ARHGAP18Q8N392 663 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 PSMB7Q99436 277 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 NR1D1P20393 614 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 NNTQ13423 1086 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 MYL1P05976 194 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 E2F4Q16254 413 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 IWS1Q96ST2 819 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 SH3GL3Q99963 347 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 EYA2O00167 538 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 NONOQ15233 471 aaKnown RBP eCLIP9.03□□□□□ -0.96
APOB-201ENST00000233242 SARM1Q6SZW1 724 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 ADAM21Q9UKJ8 722 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 HGSO14964 777 aaPredicted RBP9.03□□□□□ -0.96
APOB-201ENST00000233242 BAG2O95816 211 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 CYB5RLQ6IPT4 315 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 DCUN1D2Q6PH85 259 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 ARHGEF18Q6ZSZ5 1173 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 VTI1AQ96AJ9 217 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 SCINQ9Y6U3 715 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 GPATCH8Q9UKJ3 1502 aaKnown RBP9.03□□□□□ -0.96
APOB-201ENST00000233242 XRCC5P13010 732 aaKnown RBP9.03□□□□□ -0.96
APOB-201ENST00000233242 GPTP24298 496 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 PDE6BP35913 854 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms