RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 A0A1W2P6Q8 802 aa18.15■□□□□ 0.5
Trim39-203ENSMUST00000113706 Gm9048A0A1W2P7H4 802 aa18.15■□□□□ 0.5
Trim39-203ENSMUST00000113706 A0A1W2P7Z8 802 aa18.15■□□□□ 0.5
Trim39-203ENSMUST00000113706 Gm9046A0A1W2P855 802 aa18.15■□□□□ 0.5
Trim39-203ENSMUST00000113706 Cdk4P30285 303 aa18.15■□□□□ 0.5
Trim39-203ENSMUST00000113706 Cacnb3P54285 484 aa18.15■□□□□ 0.5
Trim39-203ENSMUST00000113706 Krt23Q99PS0 422 aa18.15■□□□□ 0.5
Trim39-203ENSMUST00000113706 Znf287Q9EQB9 759 aa18.15■□□□□ 0.5
Trim39-203ENSMUST00000113706 Cd2apQ9JLQ0 637 aa18.15■□□□□ 0.5
Trim39-203ENSMUST00000113706 Rgs17Q9QZB0 210 aa18.15■□□□□ 0.5
Trim39-203ENSMUST00000113706 Stxbp4Q9WV89 557 aa18.15■□□□□ 0.5
Trim39-203ENSMUST00000113706 Atp8b5A3FIN4 1183 aa18.15■□□□□ 0.5
Trim39-203ENSMUST00000113706 Gm10134F6ZQC6 126 aa18.15■□□□□ 0.5
Trim39-203ENSMUST00000113706 Nsrp1Q5NCR9 542 aa18.15■□□□□ 0.5
Trim39-203ENSMUST00000113706 Yipf1Q91VU1 306 aa18.15■□□□□ 0.5
Trim39-203ENSMUST00000113706 Wdr64Q9D565 1086 aa18.15■□□□□ 0.5
Trim39-203ENSMUST00000113706 Vnn1Q9Z0K8 512 aa18.15■□□□□ 0.5
Trim39-203ENSMUST00000113706 DSCC1Q14AI0 399 aa18.14■□□□□ 0.49
Trim39-203ENSMUST00000113706 Gtf2f1Q3THK3 508 aaKnown RBP18.14■□□□□ 0.49
Trim39-203ENSMUST00000113706 Dpp8Q80YA7 892 aa18.14■□□□□ 0.49
Trim39-203ENSMUST00000113706 Myo1hQ9D6A1 958 aa18.14■□□□□ 0.49
Trim39-203ENSMUST00000113706 Ubxn8Q9QZ49 277 aa18.14■□□□□ 0.49
Trim39-203ENSMUST00000113706 C87499Q3UX49 493 aa18.14■□□□□ 0.49
Trim39-203ENSMUST00000113706 Ift122Q6NWV3 1182 aa18.14■□□□□ 0.49
Trim39-203ENSMUST00000113706 Arid5bQ8BM75 1188 aaKnown RBP18.14■□□□□ 0.49
Trim39-203ENSMUST00000113706 Eif6O55135 245 aa18.13■□□□□ 0.49
Trim39-203ENSMUST00000113706 Spata18Q0P557 537 aa18.13■□□□□ 0.49
Trim39-203ENSMUST00000113706 Mtmr4Q91XS1 1190 aa18.13■□□□□ 0.49
Trim39-203ENSMUST00000113706 Ttc5Q99LG4 440 aa18.13■□□□□ 0.49
Trim39-203ENSMUST00000113706 Iqca1Q9CUL5 857 aa18.13■□□□□ 0.49
Trim39-203ENSMUST00000113706 Olfr247E9PVJ7 320 aa18.13■□□□□ 0.49
Trim39-203ENSMUST00000113706 Gucy1a2F8VQK3 730 aa18.13■□□□□ 0.49
Trim39-203ENSMUST00000113706 Olfr819K7N727 320 aa18.13■□□□□ 0.49
Trim39-203ENSMUST00000113706 MarcksP26645 309 aaKnown RBP18.13■□□□□ 0.49
Trim39-203ENSMUST00000113706 Rad23bP54728 416 aa18.13■□□□□ 0.49
Trim39-203ENSMUST00000113706 Plekha7Q3UIL6 1118 aaKnown RBP18.13■□□□□ 0.49
Trim39-203ENSMUST00000113706 Scnn1aQ61180 699 aa18.13■□□□□ 0.49
Trim39-203ENSMUST00000113706 Usp49Q6P9L4 685 aa18.13■□□□□ 0.49
Trim39-203ENSMUST00000113706 Csrnp2Q8BGQ2 534 aa18.13■□□□□ 0.49
Trim39-203ENSMUST00000113706 Tfap4Q9JIZ5 338 aa18.13■□□□□ 0.49
Trim39-203ENSMUST00000113706 Psmd10Q9Z2X2 231 aa18.13■□□□□ 0.49
Trim39-203ENSMUST00000113706 Glra4Q61603 456 aa18.13■□□□□ 0.49
Trim39-203ENSMUST00000113706 Tas2r124Q7M718 309 aa18.13■□□□□ 0.49
Trim39-203ENSMUST00000113706 Olfr119Q7TRJ5 321 aa18.13■□□□□ 0.49
Trim39-203ENSMUST00000113706 Cep120Q7TSG1 988 aa18.13■□□□□ 0.49
Trim39-203ENSMUST00000113706 Ctdspl2Q8BG15 465 aa18.13■□□□□ 0.49
Trim39-203ENSMUST00000113706 Ccz1Q8C1Y8 480 aa18.13■□□□□ 0.49
Trim39-203ENSMUST00000113706 MbipQ99LQ1 341 aa18.13■□□□□ 0.49
Trim39-203ENSMUST00000113706 Myh7bA2AQP0 1941 aa18.12■□□□□ 0.49
Trim39-203ENSMUST00000113706 Lrrd1Q8C0R9 853 aa18.12■□□□□ 0.49
Trim39-203ENSMUST00000113706 Ppp1r11Q8K1L5 131 aa18.12■□□□□ 0.49
Trim39-203ENSMUST00000113706 Cd248Q91V98 765 aa18.12■□□□□ 0.49
Trim39-203ENSMUST00000113706 Vps16Q920Q4 839 aa18.12■□□□□ 0.49
Trim39-203ENSMUST00000113706 Grin2dQ03391 1323 aa18.12■□□□□ 0.49
Trim39-203ENSMUST00000113706 Sycp2lA0A0M3U1B0 842 aa18.12■□□□□ 0.49
Trim39-203ENSMUST00000113706 Kcna1P16388 495 aa18.12■□□□□ 0.49
Trim39-203ENSMUST00000113706 Nap1l2P51860 460 aa18.12■□□□□ 0.49
Trim39-203ENSMUST00000113706 Nbr1P97432 988 aa18.12■□□□□ 0.49
Trim39-203ENSMUST00000113706 Zbtb39Q6PDK0 712 aa18.12■□□□□ 0.49
Trim39-203ENSMUST00000113706 Ints4Q8CIM8 964 aa18.12■□□□□ 0.49
Trim39-203ENSMUST00000113706 Nod2Q8K3Z0 1020 aa18.12■□□□□ 0.49
Trim39-203ENSMUST00000113706 Mboat4P0C7A3 435 aa18.11■□□□□ 0.49
Trim39-203ENSMUST00000113706 Fam196bQ6GQV1 535 aa18.11■□□□□ 0.49
Trim39-203ENSMUST00000113706 Kri1Q8VDQ9 704 aaKnown RBP18.11■□□□□ 0.49
Trim39-203ENSMUST00000113706 Lzts2Q91YU6 671 aa18.11■□□□□ 0.49
Trim39-203ENSMUST00000113706 Rbm10Q99KG3 930 aaKnown RBP18.11■□□□□ 0.49
Trim39-203ENSMUST00000113706 Lbhd1A0A087WPA0 259 aa18.11■□□□□ 0.49
Trim39-203ENSMUST00000113706 Gm30191A0A0U1RNT7 187 aa18.11■□□□□ 0.49
Trim39-203ENSMUST00000113706 Cyp26c1B2RXA7 518 aa18.11■□□□□ 0.49
Trim39-203ENSMUST00000113706 Grm4Q68EF4 912 aa18.11■□□□□ 0.49
Trim39-203ENSMUST00000113706 Slu7Q8BHJ9 585 aa18.11■□□□□ 0.49
Trim39-203ENSMUST00000113706 Cep85Q8BMK0 761 aa18.11■□□□□ 0.49
Trim39-203ENSMUST00000113706 Sox30Q8CGW4 782 aa18.11■□□□□ 0.49
Trim39-203ENSMUST00000113706 Filip1Q9CS72 1211 aa18.11■□□□□ 0.49
Trim39-203ENSMUST00000113706 Zkscan4Q5SZT6 480 aa18.11■□□□□ 0.49
Trim39-203ENSMUST00000113706 Lca5Q80ST9 704 aa18.11■□□□□ 0.49
Trim39-203ENSMUST00000113706 Kctd3Q8BFX3 815 aa18.11■□□□□ 0.49
Trim39-203ENSMUST00000113706 Tmem60Q8K174 133 aa18.11■□□□□ 0.49
Trim39-203ENSMUST00000113706 Hexim1Q8R409 356 aaKnown RBP18.11■□□□□ 0.49
Trim39-203ENSMUST00000113706 Wdr78E9PYY5 807 aa18.1■□□□□ 0.49
Trim39-203ENSMUST00000113706 PRAG1Q571I4 1179 aa18.1■□□□□ 0.49
Trim39-203ENSMUST00000113706 Usp13Q5BKP2 858 aa18.1■□□□□ 0.49
Trim39-203ENSMUST00000113706 Lamc2Q61092 1191 aa18.1■□□□□ 0.49
Trim39-203ENSMUST00000113706 Kiaa1524Q8BWY9 907 aa18.1■□□□□ 0.49
Trim39-203ENSMUST00000113706 Polr2dQ9D7M8 142 aaKnown RBP18.1■□□□□ 0.49
Trim39-203ENSMUST00000113706 Ifi35Q9D8C4 286 aa18.1■□□□□ 0.49
Trim39-203ENSMUST00000113706 Homer1Q9Z2Y3 366 aa18.1■□□□□ 0.49
Trim39-203ENSMUST00000113706 A0A0U1RNP2 1173 aa18.1■□□□□ 0.49
Trim39-203ENSMUST00000113706 GabreA2AMW3 916 aa18.1■□□□□ 0.49
Trim39-203ENSMUST00000113706 Api5O35841 504 aaKnown RBP18.1■□□□□ 0.49
Trim39-203ENSMUST00000113706 Tmc4Q7TQ65 694 aa18.1■□□□□ 0.49
Trim39-203ENSMUST00000113706 Clec16aQ80U30 1036 aa18.1■□□□□ 0.49
Trim39-203ENSMUST00000113706 Lrrc8aQ80WG5 810 aa18.1■□□□□ 0.49
Trim39-203ENSMUST00000113706 Gga3Q8BMI3 718 aa18.1■□□□□ 0.49
Trim39-203ENSMUST00000113706 Tex13cD3YU32 604 aa18.1■□□□□ 0.49
Trim39-203ENSMUST00000113706 LdhaP06151 332 aaKnown RBP18.1■□□□□ 0.49
Trim39-203ENSMUST00000113706 Pex1Q5BL07 1284 aa18.1■□□□□ 0.49
Trim39-203ENSMUST00000113706 Slc9a1Q61165 820 aa18.1■□□□□ 0.49
Trim39-203ENSMUST00000113706 Lilrb3P97484 841 aa18.09■□□□□ 0.49
Trim39-203ENSMUST00000113706 Atxn7Q8R4I1 867 aa18.09■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms