RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Stim1P70302 685 aa19.02■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Serpinb6Q60854 378 aa19.02■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Gga2Q6P5E6 603 aa19.02■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Ccdc38Q8CDN8 563 aa19.02■□□□□ 0.63
Ctcf-201ENSMUST00000005841 GdaQ9R111 454 aa19.02■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Tmtc1Q3UV71 942 aa19.01■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Serpinb6dQ3UWK8 375 aa19.01■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Antxr2Q6DFX2 487 aa19.01■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Exoc8Q6PGF7 716 aa19.01■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Ccdc93Q7TQK5 629 aa19.01■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Ces1dQ8VCT4 565 aa19.01■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Efcab2Q9CQ46 164 aa19.01■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Scrn1Q9CZC8 414 aa19.01■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Stag1Q9D3E6 1258 aa19.01■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Mss51Q9D5Z5 446 aa19.01■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Ddx3xQ62167 662 aaKnown RBP19.01■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Plekho1Q9JIY0 408 aa19.01■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Cyp3a25O09158 503 aa19.01■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Phf8Q80TJ7 1023 aa19.01■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Eif3hQ91WK2 352 aaKnown RBP19.01■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Bap1Q99PU7 728 aa19.01■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Sar1bQ9CQC9 198 aa19.01■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Fsip1Q9D3V5 435 aa19.01■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Nup98Q6PFD9 1816 aaKnown RBP19■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Ccdc33Q3ULW6 985 aa19■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Fam160b2Q80YR2 744 aa19■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Zdhhc14Q8BQQ1 489 aa19■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Ythdf3Q8BYK6 585 aaKnown RBP19■□□□□ 0.63
Ctcf-201ENSMUST00000005841 TkfcQ8VC30 578 aa19■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Adcy3Q8VHH7 1145 aa19■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Igsf9bE9PZ19 1328 aa19■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Irx1P81068 480 aa19■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Meis3P97368 378 aa19■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Camsap3Q80VC9 1252 aa19■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Cdk17Q8K0D0 523 aa19■□□□□ 0.63
Ctcf-201ENSMUST00000005841 PparaP23204 468 aa19■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Ifnar1P33896 590 aa19■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Surf6P70279 355 aaKnown RBP19■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Tmem35bQ3U0Y2 150 aa19■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Nme8Q715T0 586 aa19■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Sptlc3Q8BG54 563 aa19■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Ttc26Q8BS45 554 aa19■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Morc2bQ8C5W4 1022 aa19■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Pcdha12Q91Y18 950 aa19■□□□□ 0.63
Ctcf-201ENSMUST00000005841 EpgnQ924X1 152 aa19■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Apobec3Q99J72 440 aaKnown RBP19■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Tktl2Q9D4D4 627 aa19■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Serpina16D3Z660 418 aa18.99■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Ankrd35E9Q9D8 996 aa18.99■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Slc27a1Q60714 646 aa18.99■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Myl10Q62082 202 aa18.99■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Spats2Q8K1N4 545 aaKnown RBP18.99■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Ssc5dQ8BV57 1371 aa18.99■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Znfx1Q8R151 1909 aaKnown RBP18.99■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Gcom1E9PZ54 550 aa18.99■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Cyp19a1P28649 503 aa18.99■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Gpr182P43142 395 aa18.99■□□□□ 0.63
Ctcf-201ENSMUST00000005841 MyzapQ3UIJ9 466 aa18.99■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Prpf40bQ80W14 870 aa18.99■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Clca2Q8BG22 942 aa18.99■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Mtfr1lQ9CWE0 289 aa18.99■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Eif4enif1Q9EST3 983 aaKnown RBP18.99■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Sgpp1Q9JI99 430 aa18.99■□□□□ 0.63
Ctcf-201ENSMUST00000005841 JcadQ5DTX6 1320 aa18.99■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Sept1P42209 366 aa18.98■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Ttc12Q8BW49 704 aa18.98■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Spice1Q8C804 860 aa18.98■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Ltn1Q6A009 1767 aa18.98■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Prl3d1P18121 224 aa18.98■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Wasf1Q8R5H6 559 aa18.98■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Peg12Q9WVA7 283 aa18.98■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Mast3Q3U214 1321 aa18.98■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Plch1Q4KWH5 1682 aa18.98■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Hnrnph3D3Z3N4 346 aaKnown RBP18.98■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Chrna9G3X8Z7 479 aa18.98■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Dnm2P39054 870 aaKnown RBP18.98■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Mcm5P49718 733 aa18.98■□□□□ 0.63
Ctcf-201ENSMUST00000005841 CtcfQ61164 736 aaKnown RBP18.98■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Ezh2Q61188 746 aaKnown RBP18.98■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Znf771Q8BJ90 317 aa18.98■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Chmp7Q8R1T1 451 aa18.98■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Klc4Q9DBS5 619 aa18.98■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Q3TYL0 343 aa18.97■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Mis18aQ9CZJ6 204 aa18.97■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Mmp14P53690 582 aa18.97■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Klra9Q2TJJ8 266 aa18.97■□□□□ 0.63
Ctcf-201ENSMUST00000005841 C87499Q3UX49 493 aa18.97■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Tas2r124Q7M718 309 aa18.97■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Eps8l1Q8R5F8 716 aa18.97■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Klra10Q9R1G6 266 aa18.97■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Cyp2j7A0A140T8U1 504 aa18.97■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Zkscan8Q8BSL0 588 aa18.97■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Usp15Q8R5H1 981 aa18.97■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Cfap45Q9D9U9 551 aa18.97■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Ubxn8Q9QZ49 277 aa18.97■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Gm4307E9PZY4 289 aa18.96■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Gm4312K9J7E2 289 aa18.96■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Epb41l4aP52963 686 aa18.96■□□□□ 0.63
Ctcf-201ENSMUST00000005841 SelenooQ9DBC0 667 aa18.96■□□□□ 0.63
Ctcf-201ENSMUST00000005841 Stard3nlQ9DCI3 235 aa18.96■□□□□ 0.63
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms