RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W SAF1P38352 637 aa6□□□□□ -1.45
ATG4YNL223W PHO89P38361 574 aa6□□□□□ -1.45
ATG4YNL223W MEF2P39677 819 aa6□□□□□ -1.45
ATG4YNL223W IST3P40565 148 aaPredicted RBP6□□□□□ -1.45
ATG4YNL223W FAR3P46671 204 aa6□□□□□ -1.45
ATG4YNL223W YNL058CP53947 316 aa6□□□□□ -1.45
ATG4YNL223W YNL034WP53963 612 aa6□□□□□ -1.45
ATG4YNL223W YNL018CP53976 612 aa6□□□□□ -1.45
ATG4YNL223W TRS31Q03337 283 aa6□□□□□ -1.45
ATG4YNL223W TAF11Q04226 346 aa6□□□□□ -1.45
ATG4YNL223W YCS4Q06156 1176 aa6□□□□□ -1.45
ATG4YNL223W NOT5Q12514 560 aaPredicted RBP6□□□□□ -1.45
ATG4YNL223W YMR030W-AQ3E760 96 aa6□□□□□ -1.45
ATG4YNL223W CLN1P20437 546 aa5.99□□□□□ -1.45
ATG4YNL223W PPH22P23595 377 aa5.99□□□□□ -1.45
ATG4YNL223W RPC19P28000 142 aaKnown RBP5.99□□□□□ -1.45
ATG4YNL223W PSE1P32337 1089 aaKnown RBP5.99□□□□□ -1.45
ATG4YNL223W MVD1P32377 396 aaKnown RBP5.99□□□□□ -1.45
ATG4YNL223W PDB1P32473 366 aaKnown RBP5.99□□□□□ -1.45
ATG4YNL223W SGE1P33335 543 aa5.99□□□□□ -1.45
ATG4YNL223W TGL4P36165 910 aa5.99□□□□□ -1.45
ATG4YNL223W KTR4P38131 464 aa5.99□□□□□ -1.45
ATG4YNL223W MRP21P38175 177 aa5.99□□□□□ -1.45
ATG4YNL223W ATG12P38316 186 aa5.99□□□□□ -1.45
ATG4YNL223W YHL041WP38730 149 aa5.99□□□□□ -1.45
ATG4YNL223W YDR089WP38966 869 aa5.99□□□□□ -1.45
ATG4YNL223W YIL161WP40449 235 aaKnown RBP5.99□□□□□ -1.45
ATG4YNL223W BUD13P46947 266 aaPredicted RBP5.99□□□□□ -1.45
ATG4YNL223W YNR063WP53749 607 aa5.99□□□□□ -1.45
ATG4YNL223W NOP15P53927 220 aaPredicted RBP5.99□□□□□ -1.45
ATG4YNL223W DOS2P54858 310 aa5.99□□□□□ -1.45
ATG4YNL223W NUP100Q02629 959 aa5.99□□□□□ -1.45
ATG4YNL223W RTN1Q04947 295 aaKnown RBP5.99□□□□□ -1.45
ATG4YNL223W YLR177WQ06251 628 aa5.99□□□□□ -1.45
ATG4YNL223W LDB18Q07887 179 aa5.99□□□□□ -1.45
ATG4YNL223W HMG2P12684 1045 aa5.98□□□□□ -1.45
ATG4YNL223W GLN4P13188 809 aaKnown RBP5.98□□□□□ -1.45
ATG4YNL223W HEM3P28789 327 aa5.98□□□□□ -1.45
ATG4YNL223W PHA2P32452 334 aa5.98□□□□□ -1.45
ATG4YNL223W POL12P38121 705 aaPredicted RBP5.98□□□□□ -1.45
ATG4YNL223W APM3P38153 483 aa5.98□□□□□ -1.45
ATG4YNL223W ERP5P38819 212 aa5.98□□□□□ -1.45
ATG4YNL223W MNN1P39106 762 aa5.98□□□□□ -1.45
ATG4YNL223W HOS4P40480 1083 aa5.98□□□□□ -1.45
ATG4YNL223W SEC28P40509 296 aaKnown RBP5.98□□□□□ -1.45
ATG4YNL223W MAD3P47074 515 aa5.98□□□□□ -1.45
ATG4YNL223W TMA22P47089 198 aaPredicted RBP5.98□□□□□ -1.45
ATG4YNL223W AMA1P50082 593 aa5.98□□□□□ -1.45
ATG4YNL223W PEX8P53248 589 aa5.98□□□□□ -1.45
ATG4YNL223W RPL34AP87262 121 aaPredicted RBP5.98□□□□□ -1.45
ATG4YNL223W REG1Q00816 1014 aa5.98□□□□□ -1.45
ATG4YNL223W RSC4Q02206 625 aa5.98□□□□□ -1.45
ATG4YNL223W SPC24Q04477 213 aa5.98□□□□□ -1.45
ATG4YNL223W SYT1Q06836 1226 aa5.98□□□□□ -1.45
ATG4YNL223W ADY3Q07732 790 aa5.98□□□□□ -1.45
ATG4YNL223W AHC1Q12433 566 aa5.98□□□□□ -1.45
ATG4YNL223W RMD5Q12508 421 aa5.98□□□□□ -1.45
ATG4YNL223W ENO1P00924 437 aaKnown RBP5.97□□□□□ -1.45
ATG4YNL223W MRPL8P22353 238 aa5.97□□□□□ -1.45
ATG4YNL223W MIH1P23748 554 aa5.97□□□□□ -1.45
ATG4YNL223W PEX34P25584 144 aa5.97□□□□□ -1.45
ATG4YNL223W BEM1P29366 551 aa5.97□□□□□ -1.45
ATG4YNL223W GCD11P32481 527 aaKnown RBP5.97□□□□□ -1.45
ATG4YNL223W RRN3P36070 627 aa5.97□□□□□ -1.45
ATG4YNL223W MRPL40P36534 297 aa5.97□□□□□ -1.45
ATG4YNL223W RFC3P38629 340 aa5.97□□□□□ -1.45
ATG4YNL223W YHR182WP38870 785 aa5.97□□□□□ -1.45
ATG4YNL223W SLX8P40072 274 aa5.97□□□□□ -1.45
ATG4YNL223W CHS6P40955 746 aa5.97□□□□□ -1.45
ATG4YNL223W ARC1P46672 376 aaKnown RBP5.97□□□□□ -1.45
ATG4YNL223W IST1P53843 298 aaPredicted RBP5.97□□□□□ -1.45
ATG4YNL223W YPL014WQ02606 381 aa5.97□□□□□ -1.45
ATG4YNL223W TFB2Q02939 513 aa5.97□□□□□ -1.45
ATG4YNL223W YMR206WQ03695 313 aa5.97□□□□□ -1.45
ATG4YNL223W TVP15Q03860 143 aa5.97□□□□□ -1.45
ATG4YNL223W ALR1Q08269 859 aa5.97□□□□□ -1.45
ATG4YNL223W NDD1Q08887 554 aa5.97□□□□□ -1.45
ATG4YNL223W TMA46Q12000 345 aaKnown RBP5.97□□□□□ -1.45
ATG4YNL223W APC9Q12107 265 aa5.97□□□□□ -1.45
ATG4YNL223W CHS5Q12114 671 aaKnown RBP5.97□□□□□ -1.45
ATG4YNL223W STB3Q12427 513 aa5.97□□□□□ -1.45
ATG4YNL223W YLR149CQ99296 730 aa5.97□□□□□ -1.45
ATG4YNL223W RAD3P06839 778 aa5.96□□□□□ -1.45
ATG4YNL223W EXO70P19658 623 aa5.96□□□□□ -1.45
ATG4YNL223W YSP3P25036 478 aa5.96□□□□□ -1.45
ATG4YNL223W NPP1P25353 742 aa5.96□□□□□ -1.45
ATG4YNL223W MLS1P30952 554 aa5.96□□□□□ -1.45
ATG4YNL223W SYN8P31377 255 aa5.96□□□□□ -1.45
ATG4YNL223W YJR061WP40355 935 aa5.96□□□□□ -1.45
ATG4YNL223W UBP7P40453 1071 aa5.96□□□□□ -1.45
ATG4YNL223W SAP4P53036 818 aa5.96□□□□□ -1.45
ATG4YNL223W EFM6P53970 246 aa5.96□□□□□ -1.45
ATG4YNL223W GTR1Q00582 310 aa5.96□□□□□ -1.45
ATG4YNL223W TOF2Q02208 771 aa5.96□□□□□ -1.45
ATG4YNL223W PET117Q02771 107 aa5.96□□□□□ -1.45
ATG4YNL223W YPL109CQ02981 657 aa5.96□□□□□ -1.45
ATG4YNL223W FMN1Q03778 218 aa5.96□□□□□ -1.45
ATG4YNL223W YDR109CQ04585 715 aa5.96□□□□□ -1.45
ATG4YNL223W PEX15Q08215 383 aa5.96□□□□□ -1.45
ATG4YNL223W STE2D6VTK4 431 aa5.96□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 50.9 ms